Torovirinae

VIRION

Enveloped, spherical, about 120 nm in diameter. The RNA genome associate with the N protein to form the nucleocapsid (helical for the genus coronavirus, and tubular for the genus torovirus).

GENOME

Monopartite, linear ssRNA(+) genome of 27-32kb in size (the largest of all RNA virus genomes). Capped, and polyadenylated. The leader RNA (65-89 bp) at the 5' end of the genome is also present at the end of each subgenomic RNAs.

GENE EXPRESSION

The virion RNA is infectious and serves as both the genome and viral messenger RNA.
Genomic RNA encodes for ORF1a, as for ORF1b, it is translated by ribosomal frameshifting. Resulting proteins pp1a and pp1ab are processed into the viral polymerase (RdRp) and other non-structural proteins involved in RNA synthesis. Structural proteins are expressed as subgenomic RNAs. Each RNA (genomic and subgenomic) is translated to yield only the protein encoded by the 5'-most ORF.

REPLICATION

CYTOPLASMIC

  1. Attachement of the viral S protein (maybe also HE if present) to host receptors mediates endocytosis of the virus into the host cell.
  2. Fusion of virus membrane with the endosomal membrane (probably mediated by E2), ssRNA(+) genome is released into the cytoplasm.
  3. Synthesis and proteolytic cleavage of the replicase polyprotein.
  4. Replication occurs in viral factories. A dsRNA genome is synthesized from the genomic ssRNA(+).
  5. The dsRNA genome is transcribed/replicated thereby providing viral mRNAs/new ssRNA(+) genomes.
  6. Synthesis of structural proteins encoded by subgenomic mRNAs.
  7. Assembly and budding at membranes of the endoplasmic reticulum (ER), the intermediate compartments, and/or the Golgi complex.
  8. Release of new virions by exocytosis.

Host-virus interaction

Apoptosis modulation

Equine torovirus Berne virus induces apoptosis in infected cells at late times postinfection via host caspases activation .

Matching UniProtKB/Swiss-Prot entries

20 entries grouped by protein (browse by keywords)

All proteins are shown (view only 17 complete proteome entries)

5 entries

Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)

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HEMA_BEV
Berne virus (BEV) reference strain

Truncated non-functional hemagglutinin-esterase homolog

HEMA_BRV1
Breda virus 1 (BRV-1) reference strain
HEMA_BRV2
Breda virus 2 (BRV-2)
HEMA_HUTV
Human torovirus (HuTV)
HEMA_PTV10
Porcine torovirus (strain P10) (PoTV)

3 entries

Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)

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NCAP_BEV
Berne virus (BEV) reference strain
NCAP_BRV1
Breda virus 1 (BRV-1) reference strain
NCAP_WBV24
White bream virus (isolate Blicca bjoerkna L./Germany/DF24/00) (WBV) reference strain

3 entries

Replicase polyprotein 1a (pp1a) (ORF1a polyprotein)

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R1A_BEV
Berne virus (BEV) reference strain
R1A_BRV1
Breda virus 1 (BRV-1) reference strain
R1A_WBV24
White bream virus (isolate Blicca bjoerkna L./Germany/DF24/00) (WBV) reference strain

3 entries

Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)

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R1AB_BEV
Berne virus (BEV) reference strain
R1AB_BRV1
Breda virus 1 (BRV-1) reference strain
R1AB_WBV24
White bream virus (isolate Blicca bjoerkna L./Germany/DF24/00) (WBV) reference strain

3 entries

Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein)

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SPIKE_BEV
Berne virus (BEV) reference strain
SPIKE_BRV1
Breda virus 1 (BRV-1) reference strain
SPIKE_WBV24
White bream virus (isolate Blicca bjoerkna L./Germany/DF24/00) (WBV) reference strain

Spike glycoprotein (S glycoprotein)

3 entries

Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)

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VME1_BEV
Berne virus (BEV) reference strain
VME1_BRV1
Breda virus 1 (BRV-1) reference strain
VME1_WBV24
White bream virus (isolate Blicca bjoerkna L./Germany/DF24/00) (WBV) reference strain