Clathrin-mediated endocytosis of virus by host

fusion lysis permeabilisation

Clathrin-mediated endoycytosis (CME) is triggered by the binding of the virion to host receptors . The virion attachment to the host receptor induces the binding of an adaptor protein to the receptor cytoplasmic tail. Adaptor proteins bind to clathrin(X55878:9606), and the local concentration of adaptor proteins on the inside face of the plasma membrane allows clathrin to multimerize to form characteristic invaginations or Clathrin-Coated Pit (CCP). Membrane scission proteins DNM1/Dynamin-1(L07807:9606) or DNM2/Dynamin-2(L36983:9606) pinch off the CCP from the host membrane thereby releasing the Clathrin-Coated Vesicle (CCV).
The clathrin(X55878:9606) basket is subsequently released from the vesicle by auxilin(AB007942:9606) and hsc70(Y00371:9606). The vesicle then delivers its viral content to early endosomes. Endosomal acidic pH and /or receptor binding usually induces structural modifications of the virus surface proteins that leads to genome penetration into the cytoplasm via fusion or permeabilization mechanisms.

Matching UniProtKB/Swiss-Prot entries

375 entries grouped by protein (browse by keywords)

All proteins are shown (view only 253 complete proteome entries)

36 entries

Capsid protein VP1 (Coat protein VP1)

Select_allDeselect_all
CAPSD_AADNV
Aedes albopictus densovirus (isolate Boublik/1994) (AalDNV) reference strain

Capsid protein VP1/VP2 (Coat protein VP1/VP2)

CAPSD_AAV2S
Adeno-associated virus 2 (isolate Srivastava/1982) (AAV-2) reference strain

Capsid protein VP1

CAPSD_ADVG
Aleutian mink disease parvovirus (strain G) (ADV) reference strain

Capsid protein VP1

CAPSD_HASV1
Human astrovirus-1 (HAstV-1) reference strain

Capsid polyprotein VP90

CAPSD_JDNVP
Junonia coenia densovirus (isolate pBRJ/1990) (JcDNV) reference strain

Capsid protein VP1 (Coat protein VP1) (Structural protein VP1)

CAPSD_MUMIP
Murine minute virus (strain MVM prototype) (MVM) (Murine minute virus (strain MVM(p))) reference strain
CAPSD_PAVBP
Bovine parvovirus (isolate pAT153/1986) (BPV) reference strain
CAPSD_PAVHV
Human parvovirus B19 (strain HV) (HPV B19) reference strain

Capsid protein VP1

CAPSD_AEDEV
Aedes densonucleosis virus (strain GKV 002 002) (Aedes densovirus)

Capsid protein VP1/VP2 (Coat protein VP1/VP2)

CAPSD_DSDNV
Diatraea saccharalis densovirus (DsDNV)

Capsid protein VP1 (Coat protein VP1) (Structural protein VP1)

CAPSD_FPV
Feline panleukopenia virus (FPV)
CAPSD_FPV19
Feline panleukopenia virus (strain 193) (FPV)
CAPSD_GMDNV
Galleria mellonella densovirus (GmDNV)

Capsid protein VP1 (Coat protein VP1) (Structural protein VP1)

CAPSD_HASV2
Human astrovirus-2 (HAstV-2)

Capsid polyprotein VP90

CAPSD_HASV3
Human astrovirus-3 (HAstV-3)

Capsid polyprotein VP90

CAPSD_HASV4
Human astrovirus-4 (HAstV-4)

Capsid polyprotein VP90

CAPSD_HASV5
Human astrovirus-5 (HAstV-5)

Capsid polyprotein VP90

CAPSD_HASV6
Human astrovirus-6 (HAstV-6)

Capsid polyprotein VP90

CAPSD_HASV7
Human astrovirus-7 (HAstV-7)

Capsid polyprotein VP90

CAPSD_HASV8
Human astrovirus-8 (HAstV-8)

Capsid polyprotein VP90

CAPSD_MASV1
Mink astrovirus 1 (MAstV-1)

Capsid polyprotein VP90

CAPSD_MEVA
Mink enteritis virus (strain Abashiri) (MEV)
CAPSD_MUMIM
Murine minute virus (strain MVMi) (MVM) (Murine parvovirus)
CAPSD_OASV1
Ovine astrovirus 1 (OAstV-1)

Capsid polyprotein VP90

CAPSD_PASV1
Porcine astrovirus 1 (PAstV-1)

Capsid polyprotein VP90

CAPSD_PAVC
Canine parvovirus type 2 (CPV-2)

Capsid protein VP2 (Coat protein VP2)

CAPSD_PAVC7
Canine parvovirus type 2 (strain Dog/United States/780929/-) (CPV-2)
CAPSD_PAVCB
Canine parvovirus type 2 (isolate Dog/United States/CPV-b/1978) (CPV-2)
CAPSD_PAVCD
Canine parvovirustype 2 (isolate Dog/United States/CPV-d/1988) (CPV-2)
CAPSD_PAVCN
Canine parvovirus type 2 (isolate Dog/United States/CPV-N/1978) (CPV-2)
CAPSD_PAVHH
Hamster parvovirus H1
CAPSD_PAVHU
Human parvovirus B19 (isolate AU) (HPV B19)
CAPSD_PAVL3
Parvovirus LuIII
CAPSD_PAVP9
Porcine parvovirus (strain 90HS) (PPV)
CAPSD_PAVPK
Porcine parvovirus (strain Kresse) (PPV)
CAPSD_PAVPN
Porcine parvovirus (strain NADL-2) (PPV)

3 entries

Penton protein (CP-P) (Penton base protein) (Protein III)

Select_allDeselect_all
CAPSP_ADE02
Human adenovirus C serotype 2 (HAdV-2) (Human adenovirus 2) reference strain
CAPSP_ADE05
Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5) reference strain
CAPSP_ADE12
Human adenovirus A serotype 12 (HAdV-12) (Human adenovirus 12) reference strain

62 entries

Envelope glycoprotein gp160 (Env polyprotein)

Select_allDeselect_all
ENV_HV1B1
Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1) reference strain
ENV_HV1BR
Human immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI) (HIV-1) reference strain
ENV_HV1EL
Human immunodeficiency virus type 1 group M subtype D (isolate ELI) (HIV-1) reference strain
ENV_HV1H2
Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) (HIV-1) reference strain
ENV_HV1MA
Human immunodeficiency virus type 1 group M subtype A (isolate MAL) (HIV-1) reference strain
ENV_HV1MN
Human immunodeficiency virus type 1 group M subtype B (isolate MN) (HIV-1) reference strain
ENV_HV1VI
Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850) (HIV-1) reference strain
ENV_HV1YF
Human immunodeficiency virus type 1 group N (isolate YBF30) (HIV-1) reference strain
ENV_HV2BE
Human immunodeficiency virus type 2 subtype A (isolate BEN) (HIV-2) reference strain
ENV_HV2ST
Human immunodeficiency virus type 2 subtype A (isolate ST) (HIV-2) reference strain
ENV_HV190
Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056) (HIV-1)
ENV_HV192
Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025) (HIV-1)
ENV_HV193
Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020) (HIV-1)
ENV_HV196
Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535) (HIV-1)
ENV_HV197
Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11) (HIV-1)
ENV_HV19N
Human immunodeficiency virus type 1 group M subtype G (isolate 92NG083) (HIV-1)
ENV_HV1A2
Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2) (HIV-1)
ENV_HV1AN
Human immunodeficiency virus type 1 group O (isolate ANT70) (HIV-1)
ENV_HV1B8
Human immunodeficiency virus type 1 group M subtype B (isolate BH8) (HIV-1)
ENV_HV1B9
Human immunodeficiency virus type 1 group M subtype B (strain 89.6) (HIV-1)
ENV_HV1BN
Human immunodeficiency virus type 1 group M subtype B (isolate BRVA) (HIV-1)
ENV_HV1C4
Human immunodeficiency virus type 1 group M subtype B (isolate CDC-451) (HIV-1)
ENV_HV1ET
Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220) (HIV-1)
ENV_HV1H3
Human immunodeficiency virus type 1 group M subtype B (isolate HXB3) (HIV-1)
ENV_HV1J3
Human immunodeficiency virus type 1 group M subtype B (isolate JH32) (HIV-1)
ENV_HV1JR
Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF) (HIV-1)
ENV_HV1KB
Human immunodeficiency virus type 1 group M subtype B (isolate KB-1/ETR) (HIV-1)
ENV_HV1LW
Human immunodeficiency virus type 1 group M subtype B (isolate LW123) (HIV-1)
ENV_HV1M2
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257) (HIV-1)
ENV_HV1MF
Human immunodeficiency virus type 1 group M subtype B (isolate MFA) (HIV-1)
ENV_HV1MP
Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255) (HIV-1)
ENV_HV1MV
Human immunodeficiency virus type 1 group O (isolate MVP5180) (HIV-1)
ENV_HV1N5
Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1)

Truncated surface protein (SU) (Glycoprotein 120) (gp120)

ENV_HV1ND
Human immunodeficiency virus type 1 group M subtype D (isolate NDK) (HIV-1)
ENV_HV1OY
Human immunodeficiency virus type 1 group M subtype B (isolate OYI) (HIV-1)
ENV_HV1RH
Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3) (HIV-1)
ENV_HV1S1
Human immunodeficiency virus type 1 group M subtype B (isolate SF162) (HIV-1)
ENV_HV1S2
Human immunodeficiency virus type 1 group M subtype J (isolate SE9280) (HIV-1)
ENV_HV1S3
Human immunodeficiency virus type 1 group M subtype B (isolate SF33) (HIV-1)
ENV_HV1S9
Human immunodeficiency virus type 1 group M subtype J (isolate SE9173) (HIV-1)
ENV_HV1SC
Human immunodeficiency virus type 1 group M subtype B (isolate SC) (HIV-1)
ENV_HV1V9
Human immunodeficiency virus type 1 group M subtype H (isolate VI991) (HIV-1)
ENV_HV1W1
Human immunodeficiency virus type 1 group M subtype B (isolate WMJ1) (HIV-1)
ENV_HV1W2
Human immunodeficiency virus type 1 group M subtype B (isolate WMJ22) (HIV-1)
ENV_HV1Y2
Human immunodeficiency virus type 1 group M subtype B (isolate YU-2) (HIV-1)
ENV_HV1YB
Human immunodeficiency virus type 1 group N (isolate YBF106) (HIV-1)
ENV_HV1Z2
Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34) (HIV-1)
ENV_HV1Z3
Human immunodeficiency virus type 1 group M subtype U (isolate Z3) (HIV-1)

Truncated surface protein (SU) (Glycoprotein 120) (gp120)

ENV_HV1Z6
Human immunodeficiency virus type 1 group M subtype D (isolate Z6) (HIV-1)
ENV_HV1Z8
Human immunodeficiency virus type 1 group M subtype D (isolate Z84) (HIV-1)
ENV_HV1ZH
Human immunodeficiency virus type 1 group M subtype A (isolate Z321) (HIV-1)
ENV_HV2CA
Human immunodeficiency virus type 2 subtype A (isolate CAM2) (HIV-2)
ENV_HV2D1
Human immunodeficiency virus type 2 subtype A (isolate D194) (HIV-2)
ENV_HV2D2
Human immunodeficiency virus type 2 subtype B (isolate D205) (HIV-2)
ENV_HV2EH
Human immunodeficiency virus type 2 subtype B (isolate EHO) (HIV-2)
ENV_HV2G1
Human immunodeficiency virus type 2 subtype A (isolate Ghana-1) (HIV-2)
ENV_HV2KR
Human immunodeficiency virus type 2 subtype A (isolate KR) (HIV-2)
ENV_HV2NZ
Human immunodeficiency virus type 2 subtype A (isolate NIH-Z) (HIV-2)
ENV_HV2RO
Human immunodeficiency virus type 2 subtype A (isolate ROD) (HIV-2)
ENV_HV2S2
Human immunodeficiency virus type 2 subtype A (isolate ST/24.1C#2) (HIV-2)
ENV_HV2SB
Human immunodeficiency virus type 2 subtype A (isolate SBLISY) (HIV-2)
ENV_HV2UC
Human immunodeficiency virus type 2 subtype B (isolate UC1) (HIV-2)

3 entries

Pre-glycoprotein polyprotein GP complex

Select_allDeselect_all
GLYC_GTOVV
Guanarito mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
GLYC_JUNIN
Junin mammarenavirus (JUNV) (Junn mammarenavirus)
GLYC_MACHU
Machupo virus (MACV)

11 entries

Glycoprotein

Select_allDeselect_all
GLYCO_DMSVA
Drosophila melanogaster sigma virus (isolate Drosophila/USA/AP30/2005) (DMelSV) reference strain
GLYCO_TIBVC
Tibrogargan virus (strain CS132) (TIBV) reference strain
GLYCO_TUPVT
Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV) reference strain
GLYCO_VSIVA
Vesicular stomatitis Indiana virus (strain San Juan) (VSIV) reference strain
GLYCO_VSIVG
Vesicular stomatitis Indiana virus (strain Glasgow) (VSIV) reference strain
GLYCO_SVCV
Spring viremia of carp virus (Rhabdovirus carpia)
GLYCO_VSIVC
Vesicular stomatitis Indiana virus (strain 94GUB Central America) (VSIV)
GLYCO_VSIVN
Vesicular stomatitis Indiana virus (strain 98COE North America) (VSIV)
GLYCO_VSIVO
Vesicular stomatitis Indiana virus (strain Orsay) (VSIV)
GLYCO_VSIVS
Vesicular stomatitis Indiana virus (strain 85CLB South America) (VSIV)
GLYCO_VSNJO
Vesicular stomatitis New Jersey virus (strain Ogden subtype Concan) (VSNJV)

1 entry

Glycoprotein G

GLYCP_NIPAV
Nipah virus

1 entry

Envelopment polyprotein (M polyprotein)

GP_CCHFI
Crimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970) (CCHFV) reference strain

1 entry

Glycoprotein 2b (Protein GP2b) (GP(S))

GP2B_EAVBU
Equine arteritis virus (strain Bucyrus) (EAV) reference strain

1 entry

Glycoprotein 3 (Protein GP3)

GP3_EAVBU
Equine arteritis virus (strain Bucyrus) (EAV) reference strain

1 entry

Glycoprotein 4 (Protein GP4)

GP4_EAVBU
Equine arteritis virus (strain Bucyrus) (EAV) reference strain

2 entries

Glycoprotein 5 (Protein GP5) (G(L))

Select_allDeselect_all
GP5_PRRSL
Porcine reproductive and respiratory syndrome virus (strain Lelystad) (PRRSV) reference strain
GP5_PRRSS
Porcine reproductive and respiratory syndrome virus (isolate Pig/United States/SD 01-08/2001) (PRRSV)

124 entries

Hemagglutinin

Select_allDeselect_all
HEMA_I34A1
Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) reference strain
HEMA_I68A4
Influenza A virus (strain A/Hong Kong/1/1968 H3N2) reference strain
HEMA_I77AF
Influenza A virus (strain A/Gull/Maryland/704/1977 H13N6) reference strain
HEMA_I96A0
Influenza A virus (strain A/Goose/Guangdong/1/1996 H5N1 genotype Gs/Gd) reference strain
HEMA_I000F
Influenza A virus (strain A/Chicken/Weybridge H7N7) (Influenza A virus (strain A/FPV/Weybridge H7N7))
HEMA_I000X
Influenza A virus (strain A/X-31 H3N2)
HEMA_I00A0
Influenza A virus (strain A/Duck/Hong Kong/2986.1/2000 H5N1 genotype C)
HEMA_I00A1
Influenza A virus (strain A/New Zealand:South Canterbury/35/2000 H1N1)
HEMA_I06A0
Influenza A virus (strain A/Russia:St.Petersburg/8/2006 H1N1)
HEMA_I07A0
Influenza A virus (strain A/USA:Texas/UR06-0195/2007 H1N1)
HEMA_I18A0
Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) (Influenza A virus (strain A/South Carolina/1/1918 H1N1))
HEMA_I30A0
Influenza A virus (strain A/Swine/Iowa/15/1930 H1N1)
HEMA_I33A0
Influenza A virus (strain A/Wilson-Smith/1933 H1N1) (Influenza A virus (strain A/WS/1933 H1N1))
HEMA_I34A0
Influenza A virus (strain A/Fowl plague virus/Rostock/8/1934 H7N1)
HEMA_I35A3
Influenza A virus (strain A/USA:Phila/1935 H1N1)
HEMA_I36A0
Influenza A virus (strain A/Henry/1936 H1N1)
HEMA_I40A0
Influenza A virus (strain A/Hickox/1940 H1N1)
HEMA_I43A0
Influenza A virus (strain A/USA:Iowa/1943 H1N1)
HEMA_I45A0
Influenza A virus (strain A/USA:Huston/AA/1945 H1N1)
HEMA_I49A0
Influenza A virus (strain A/Chicken/Germany/n/1949 H10N7)
HEMA_I49A1
Influenza A virus (strain A/Duck/Germany/1949 H10N7)
HEMA_I51A0
Influenza A virus (strain A/USA:Albany/12/1951 H1N1)
HEMA_I54A0
Influenza A virus (strain A/Leningrad/1/1954 H1N1)
HEMA_I54A2
Influenza A virus (strain A/Malaysia:Malaya/302/1954 H1N1)
HEMA_I56A1
Influenza A virus (strain A/Duck/Czechoslovakia/1956 H4N6)
HEMA_I56A2
Influenza A virus (strain A/Duck/England/1/1956 H11N6)
HEMA_I56A3
Influenza A virus (strain A/Equine/Prague/1/1956 H7N7)
HEMA_I57A0
Influenza A virus (strain A/Japan/305/1957 H2N2)
HEMA_I57A5
Influenza A virus (strain A/Singapore/1/1957 H2N2)
HEMA_I59A0
Influenza A virus (strain A/Chicken/Scotland/1959 H5N1)
HEMA_I61A0
Influenza A virus (strain A/Tern/South Africa/1961 H5N3)
HEMA_I61A1
Influenza A virus (strain A/Swine/Wisconsin/1/1961 H1N1)
HEMA_I63A0
Influenza A virus (strain A/Equine/Cambridge/1/1963 H7N7)
HEMA_I63A2
Influenza A virus (strain A/Equine/Miami/1/1963 H3N8)
HEMA_I63A3
Influenza A virus (strain A/Duck/Ukraine/1/1963 H3N8)
HEMA_I63A4
Influenza A virus (strain A/Equine/Uruguay/1/1963 H3N8)
HEMA_I64A5
Influenza A virus (strain A/Equine/C.Detroit/1/1964 H7N7)
HEMA_I64A6
Influenza A virus (strain A/Equine/Detroit/1/1964 H7N7)
HEMA_I66A0
Influenza A virus (strain A/Turkey/Ontario/7732/1966 H5N9)
HEMA_I66A1
Influenza A virus (strain A/Turkey/Wisconsin/1/1966 H9N2)
HEMA_I66A2
Influenza A virus (strain A/Equine/Lexington/1/1966 H7N7)
HEMA_I67A2
Influenza A virus (strain A/Swine/Wisconsin/1/1967 H1N1)
HEMA_I68A0
Influenza A virus (strain A/Aichi/2/1968 H3N2)
HEMA_I68A3
Influenza A virus (strain A/Turkey/Ontario/6118/1968 H8N4)
HEMA_I68A5
Influenza A virus (strain A/Korea/426/1968 H2N2)
HEMA_I68A6
Influenza A virus (strain A/Northern Territory/60/1968 H3N2) (Influenza A virus (strain NT60)) (Influenza A virus (strain A/NT/60/1968 H3N2))
HEMA_I71A1
Influenza A virus (strain A/Memphis/1/1971 H3N2)
HEMA_I71A2
Influenza A virus (strain A/Turkey/Oregon/1971 H7N3)
HEMA_I71A3
Influenza A virus (strain A/Equine/Tokyo/1971 H3N2)
HEMA_I72A0
Influenza A virus (strain A/Equine/Algiers/1972 H3N8)
HEMA_I72A2
Influenza A virus (strain A/Udorn/307/1972 H3N2)
HEMA_I72A3
Influenza A virus (strain A/Memphis/102/1972 H3N2)
HEMA_I72A4
Influenza A virus (strain A/Memphis/101/1972 H3N2)
HEMA_I72A5
Influenza A virus (strain A/Shearwater/Australia/1972 H6N5)
HEMA_I72A7
Influenza A virus (strain A/Equine/Switzerland/137/1972 H7N7)
HEMA_I73A1
Influenza A virus (strain A/Equine/Cambridge/1/1973 H7N7)
HEMA_I73A4
Influenza A virus (strain A/Equine/London/1416/1973 H7N7)
HEMA_I73A5
Influenza A virus (strain A/Port Chalmers/1/1973 H3N2)
HEMA_I74A2
Influenza A virus (strain A/Duck/Memphis/928/1974 H3N8)
HEMA_I75A0
Influenza A virus (strain A/Beijing/39/1975 H3N2)
HEMA_I75A3
Influenza A virus (strain A/Victoria/3/1975 H3N2)
HEMA_I75A4
Influenza A virus (strain A/Chicken/Alabama/1/1975 H4N8)
HEMA_I76A1
Influenza A virus (strain A/Duck/Alberta/28/1976 H4N6)
HEMA_I76A2
Influenza A virus (strain A/Duck/Alberta/60/1976 H12N5)
HEMA_I76A3
Influenza A virus (strain A/Duck/Alberta/78/1976 H3N8)
HEMA_I76A4
Influenza A virus (strain A/Duck/Alberta/35/1976 H1N1)
HEMA_I76A6
Influenza A virus (strain A/Memphis/110/1976 H3N2)
HEMA_I76A8
Influenza A virus (strain A/Equine/Fontainebleau/1976 H3N8) (Influenza A virus (strain A/Equine/France/1/1976 H3N8))
HEMA_I76AI
Influenza A virus (strain A/Swine/New Jersey/11/1976 H1N1)
HEMA_I76AJ
Influenza A virus (strain A/Equine/New Market/1976 H3N8)
HEMA_I76AK
Influenza A virus (strain A/Duck/New Zealand/31/1976 H4N6)
HEMA_I76AL
Influenza A virus (strain A/Equine/Sao Paulo/1/1976 H7N7)
HEMA_I77A4
Influenza A virus (strain A/Swine/Colorado/1/1977 H3N2)
HEMA_I77A8
Influenza A virus (strain A/England/321/1977 H3N2)
HEMA_I77A9
Influenza A virus (strain A/Equine/New Market/1/1977 H7N7)
HEMA_I77AA
Influenza A virus (strain A/Brazil/11/1978 H1N1)
HEMA_I77AB
Influenza A virus (strain A/USSR/90/1977 H1N1)
HEMA_I77AG
Influenza A virus (strain A/Budgerigar/Hokkaido/1/1977 H4N6)
HEMA_I78A3
Influenza A virus (strain A/Mallard/New York/6750/1978 H2N2)
HEMA_I78A4
Influenza A virus (strain A/Mallard/New York/6874/1978 H3N2)
HEMA_I78A7
Influenza A virus (strain A/Memphis/2/1978 H3N2)
HEMA_I78A8
Influenza A virus (strain A/Memphis/18/1978 H3N2)
HEMA_I79A4
Influenza A virus (strain A/Kiev/59/1979 H1N1)
HEMA_I79A7
Influenza A virus (strain A/Grey teal/Australia/2/1979 H4N4)
HEMA_I80A1
Influenza A virus (strain A/Duck/Australia/749/1980 H1N1)
HEMA_I80A2
Influenza A virus (strain A/Seal/Massachusetts/1/1980 H7N7)
HEMA_I80A4
Influenza A virus (strain A/Memphis/4/1980 H3N2)
HEMA_I80A6
Influenza A virus (strain A/Duck/Hokkaido/8/1980 H3N8)
HEMA_I80A8
Influenza A virus (strain A/Turkey/Minnesota/833/1980 H4N2)
HEMA_I80AA
Influenza A virus (strain A/India/6263/1980 H1N1)
HEMA_I80AB
Influenza A virus (strain A/Equine/Romania/1980 H3N8)
HEMA_I80AD
Influenza A virus (strain A/Gull/Minnesota/945/1980 H13N6)
HEMA_I81A2
Influenza A virus (strain A/Equine/Kentucky/1/1981)
HEMA_I81A3
Influenza A virus (strain A/Turkey/Minnesota/1661/1981 H1N1)
HEMA_I82A1
Influenza A virus (strain A/Mallard/Astrakhan/263/1982 H14N5) (Influenza A virus (strain A/Mallard/Gurjev/263/1982 H14N5))
HEMA_I82A3
Influenza A virus (strain A/Seal/Massachusetts/133/1982 H4N5)
HEMA_I83A1
Influenza A virus (strain A/Chile/1/1983 H1N1)
HEMA_I83A3
Influenza A virus (strain A/Duck/Ireland/113/1983 H5N8)
HEMA_I83A4
Influenza A virus (strain A/Turkey/Ireland/1378/1983 H5N8)
HEMA_I83A5
Influenza A virus (strain A/Chicken/Pennsylvania/1/1983 H5N2)
HEMA_I83A8
Influenza A virus (strain A/Hong Kong/5/1983 H3N2)
HEMA_I84A2
Influenza A virus (strain A/Whale/Maine/328/1984 H13N2)
HEMA_I84A3
Influenza A virus (strain A/Mink/Sweden/1984 H10N4)
HEMA_I84A4
Influenza A virus (strain A/Gull/Astrakhan/227/1984 H13N6)
HEMA_I84A5
Influenza A virus (strain A/Swine/Ukkel/1/1984 H3N2)
HEMA_I85A3
Influenza A virus (strain A/Chicken/Victoria/1/1985 H7N7)
HEMA_I85A4
Influenza A virus (strain A/Swine/Netherlands/12/1985 H1N1)
HEMA_I85A5
Influenza A virus (strain A/Equine/Santiago/1/1985 H3N8)
HEMA_I85A6
Influenza A virus (strain A/Starling/Victoria/5156/1985 H7N7)
HEMA_I85A7
Influenza A virus (strain A/Ruddy Turnstone/New Jersey/47/1985 H4N6)
HEMA_I86A1
Influenza A virus (strain A/Memphis/6/1986 H3N2)
HEMA_I86A2
Influenza A virus (strain A/Equine/Kentucky/2/1986 H3N8)
HEMA_I86A3
Influenza A virus (strain A/Equine/Tennessee/5/1986 H3N8)
HEMA_I87A1
Influenza A virus (strain A/Mallard/Ohio/556/1987 H5N9)
HEMA_I87A3
Influenza A virus (strain A/Equine/Kentucky/1/1987 H3N8)
HEMA_I88A4
Influenza A virus (strain A/Herring gull/DE/677/1988 H2N8)
HEMA_I88A6
Influenza A virus (strain A/Swine/Indiana/1726/1988 H1N1)
HEMA_I89A2
Influenza A virus (strain A/Beijing/353/1989 H3N2)
HEMA_I89A7
Influenza A virus (strain A/Equine/Jillin/1/1989 H3N8)
HEMA_I89A8
Influenza A virus (strain A/Equine/Suffolk/1989 H3N8)
HEMA_I96A2
Influenza A virus (strain A/USA:Memphis/10/1996 H1N1)
HEMA_I96A3
Influenza A virus (strain A/China:Nanchang/11/1996 H1N1)
HEMA_I97A0
Influenza A virus (strain A/Chicken/Hong Kong/220/1997 H5N1 genotype Gs/Gd)
HEMA_I97A1
Influenza A virus (strain A/Hong Kong/156/1997 H5N1 genotype Gs/Gd)

89 entries

Genome polyprotein

Select_allDeselect_all
POLG_BVDVN
Bovine viral diarrhea virus (isolate NADL) (BVDV) (Mucosal disease virus) reference strain
POLG_DEN1W
Dengue virus type 1 (strain Nauru/West Pac/1974) (DENV-1) reference strain
POLG_HCVH
Hepatitis C virus genotype 1a (isolate H) (HCV) reference strain
POLG_YEFV1
Yellow fever virus (strain 17D vaccine) (YFV) reference strain
POLG_ZIKV
Zika virus (strain Mr 766) (ZIKV) reference strain
POLG_BVDVC
Bovine viral diarrhea virus (strain CP7) (BVDV) (Mucosal disease virus)
POLG_BVDVS
Bovine viral diarrhea virus (strain SD-1) (BVDV) (Mucosal disease virus)
POLG_DEN1B
Dengue virus type 1 (strain Brazil/97-11/1997) (DENV-1)
POLG_DEN1S
Dengue virus type 1 (strain Singapore/S275/1990) (DENV-1)
POLG_DEN26
Dengue virus type 2 (strain Thailand/16681/1984) (DENV-2)
POLG_DEN27
Dengue virus type 2 (strain 16681-PDK53) (DENV-2)
POLG_DEN28
Dengue virus type 2 (isolate Thailand/0168/1979) (DENV-2)
POLG_DEN2J
Dengue virus type 2 (strain Jamaica/1409/1983) (DENV-2)
POLG_DEN2N
Dengue virus type 2 (strain Thailand/NGS-C/1944) (DENV-2)
POLG_DEN2P
Dengue virus type 2 (strain Puerto Rico/PR159-S1/1969) (DENV-2)
POLG_DEN2Q
Dengue virus type 2 (strain Peru/IQT2913/1996) (DENV-2)
POLG_DEN3C
Dengue virus type 3 (strain China/80-2/1980) (DENV-3)
POLG_DEN3I
Dengue virus type 3 (strain Singapore/8120/1995) (DENV-3)
POLG_DEN3M
Dengue virus type 3 (strain Martinique/1243/1999) (DENV-3)
POLG_DEN3P
Dengue virus type 3 (strain Philippines/H87/1956) (DENV-3)
POLG_DEN3S
Dengue virus type 3 (strain Sri Lanka/1266/2000) (DENV-3)
POLG_DEN4D
Dengue virus type 4 (strain Dominica/814669/1981) (DENV-4)
POLG_DEN4H
Dengue virus type 4 (strain Thailand/0476/1997) (DENV-4)
POLG_DEN4P
Dengue virus type 4 (strain Philippines/H241/1956) (DENV-4)
POLG_DEN4S
Dengue virus type 4 (strain Singapore/8976/1995) (DENV-4)
POLG_DEN4T
Dengue virus type 4 (strain Thailand/0348/1991) (DENV-4)
POLG_FMDV1
Foot-and-mouth disease virus (strain A10-61) (Aphthovirus A) (FMDV)
POLG_FMDV5
Foot-and-mouth disease virus (isolate -/Germany/A5Westerwald/1951 serotype A) (FMDV)
POLG_FMDVA
Foot-and-mouth disease virus (isolate Bovine/United Kingdom/A12Valle119/1932 serotype A) (FMDV)
POLG_FMDVC
Foot-and-mouth disease virus (isolate Bovine/Brazil/A24Cruzeiro/1955 serotype A) (FMDV)
POLG_FMDVI
Foot-and-mouth disease virus (isolate -/Brazil/C3Indaial/1971 serotype C) (FMDV)
POLG_FMDVO
Foot-and-mouth disease virus (isolate Bovine/Germany/O1Kaufbeuren/1966 serotype O) (FMDV)
POLG_FMDVS
Foot-and-mouth disease virus (isolate -/Spain/S8c1SantaPau/1970 serotype C) (FMDV)
POLG_FMDVT
Foot-and-mouth disease virus (isolate -/Germany/C1Oberbayen/1960 serotype C) (FMDV)
POLG_FMDVZ
Foot-and-mouth disease virus (isolate -/Azerbaijan/A22-550/1965 serotype A) (FMDV)
POLG_HCV1
Hepatitis C virus genotype 1a (isolate 1) (HCV)
POLG_HCV6A
Hepatitis C virus genotype 6a (isolate 6a33) (HCV)
POLG_HCVBB
Hepatitis C virus genotype 2c (isolate BEBE1) (HCV)
POLG_HCVCO
Hepatitis C virus genotype 1b (isolate Con1) (HCV)
POLG_HCVED
Hepatitis C virus genotype 4a (isolate ED43) (HCV)
POLG_HCVEU
Hepatitis C virus genotype 6a (isolate EUHK2) (HCV)
POLG_HCVEV
Hepatitis C virus genotype 5a (isolate EUH1480) (HCV)
POLG_HCVH9
Hepatitis C virus genotype 1c (isolate HC-G9) (HCV)
POLG_HCVIN
Hepatitis C virus genotype 1c (isolate India) (HCV)
POLG_HCVJ1
Hepatitis C virus genotype 1b (isolate HC-J1) (HCV)
POLG_HCVJ4
Hepatitis C virus genotype 1b (strain HC-J4) (HCV)
POLG_HCVJ6
Hepatitis C virus genotype 2a (isolate HC-J6) (HCV)
POLG_HCVJ8
Hepatitis C virus genotype 2b (isolate HC-J8) (HCV)
POLG_HCVJA
Hepatitis C virus genotype 1b (isolate Japanese) (HCV)
POLG_HCVJF
Hepatitis C virus genotype 2a (isolate JFH-1) (HCV)
POLG_HCVJK
Hepatitis C virus genotype 3k (isolate JK049) (HCV)
POLG_HCVJL
Hepatitis C virus genotype 6g (isolate JK046) (HCV)
POLG_HCVJP
Hepatitis C virus genotype 2b (isolate JPUT971017) (HCV)
POLG_HCVJT
Hepatitis C virus genotype 1b (isolate HC-JT) (HCV)
POLG_HCVK3
Hepatitis C virus genotype 3a (isolate k3a) (HCV)
POLG_HCVNZ
Hepatitis C virus genotype 3a (isolate NZL1) (HCV)
POLG_HCVR6
Hepatitis C virus genotype 1b (isolate HCR6) (HCV)
POLG_HCVSA
Hepatitis C virus genotype 5a (isolate SA13) (HCV)
POLG_HCVT5
Hepatitis C virus genotype 6b (isolate Th580) (HCV)
POLG_HCVTR
Hepatitis C virus genotype 3b (isolate Tr-Kj) (HCV)
POLG_HCVTW
Hepatitis C virus genotype 1b (isolate Taiwan) (HCV)
POLG_HCVVA
Hepatitis C virus genotype 2k (isolate VAT96) (HCV)
POLG_HCVVN
Hepatitis C virus genotype 6d (isolate VN235) (HCV)
POLG_HCVVO
Hepatitis C virus genotype 6k (isolate VN405) (HCV)
POLG_HCVVP
Hepatitis C virus genotype 6h (isolate VN004) (HCV)
POLG_HE71B
Human enterovirus 71 (strain BrCr) (Ev 71)
POLG_HE71M
Human enterovirus 71 (strain 7423/MS/87) (Ev 71)
POLG_HPE1H
Human parechovirus 1 (strain Harris) (HPeV-1) (Echovirus 22)
POLG_JAEV1
Japanese encephalitis virus (strain SA-14)
POLG_JAEV5
Japanese encephalitis virus (strain SA(v))
POLG_JAEVJ
Japanese encephalitis virus (strain Jaoars982)
POLG_KUNJM
Kunjin virus (strain MRM61C)
POLG_LANVT
Langat virus (strain TP21)
POLG_LIV
Louping ill virus (Li)
POLG_MVEV5
Murray valley encephalitis virus (strain MVE-1-51) (MVEV)
POLG_POWVL
Tick-borne powassan virus (strain LB) (POWV) (Powassan virus)
POLG_TBEVH
Tick-borne encephalitis virus (strain Hypr) (TBEV)
POLG_TBEVS
Tick-borne encephalitis virus Far Eastern subtype (strain Sofjin) (SOFV) (Sofjin virus)
POLG_TBEVW
Tick-borne encephalitis virus European subtype (strain Neudoerfl) (NEUV) (Neudoerfl virus)
POLG_WNV
West Nile virus (WNV)
POLG_YEFVA
Yellow fever virus (strain Ghana/Asibi/1927) (YFV)
POLG_YEFVC
Yellow fever virus (isolate Ivory Coast/1999) (YFV)
POLG_YEFVE
Yellow fever virus (isolate Ethiopia/Couma/1961) (YFV)
POLG_YEFVF
Yellow fever virus (strain French neurotropic vaccine FNV) (YFV)
POLG_YEFVI
Yellow fever virus (isolate Ivory Coast/85-82H/1982) (YFV)
POLG_YEFVN
Yellow fever virus (isolate Angola/14FA/1971) (YFV)
POLG_YEFVT
Yellow fever virus (strain Trinidad/TRINID79A/1979) (YFV)
POLG_YEFVU
Yellow fever virus (isolate Uganda/A7094A4/1948) (YFV)

17 entries

Structural polyprotein (p110)

Select_allDeselect_all
POLS_RUBVT
Rubella virus (strain Therien) (RUBV) reference strain
POLS_SFV
Semliki forest virus (SFV) reference strain

Structural polyprotein (p130)

POLS_SINDV
Sindbis virus (SINV) reference strain

Structural polyprotein (p130)

POLS_EEVV3
Venezuelan equine encephalitis virus (strain 3880) (VEEV)

Structural polyprotein (p130)

POLS_EEVV8
Venezuelan equine encephalitis virus (strain TC-83) (VEEV)

Structural polyprotein (p130)

POLS_EEVVE
Venezuelan equine encephalitis virus (strain Everglades Fe3-7c) (VEEV)

Structural polyprotein (p130)

POLS_EEVVM
Venezuelan equine encephalitis virus (strain Mena II) (VEEV)

Structural polyprotein (p130)

POLS_EEVVP
Venezuelan equine encephalitis virus (strain P676) (VEEV)

Structural polyprotein (p130)

POLS_EEVVT
Venezuelan equine encephalitis virus (strain Trinidad donkey) (VEEV)

Structural polyprotein (p130)

POLS_RUBVB
Rubella virus (strain BRD1) (RUBV)
POLS_RUBVC
Rubella virus (strain BRDII) (RUBV)
POLS_RUBVD
Rubella virus (strain Cendehill) (RUBV)
POLS_RUBVM
Rubella virus (strain M33) (RUBV)
POLS_RUBVN
Rubella virus (strain RN-UK86) (RUBV)
POLS_RUBVO
Rubella virus (strain TO-336 vaccine) (RUBV)
POLS_RUBVR
Rubella virus (strain RA27/3 vaccine) (RUBV)
POLS_RUBVV
Rubella virus (strain TO-336) (RUBV)

1 entry

Frameshifted structural polyprotein (p130)

POLSF_SFV
Semliki forest virus (SFV)

2 entries

Envelope glycoprotein p57 (gp84) (gp94)

Select_allDeselect_all
VGLG_BDVV
Borna disease virus (strain V) (BDV) reference strain
VGLG_BDV1
Borna disease virus 1 (BoDV-1)

11 entries

Envelope glycoprotein (GP1,2) (GP)

Select_allDeselect_all
VGP_EBOZM
Zaire ebolavirus (strain Mayinga-76) (ZEBOV) (Zaire Ebola virus) reference strain
VGP_EBOEC
Zaire ebolavirus (strain Eckron-76) (ZEBOV) (Zaire Ebola virus)
VGP_EBOG4
Zaire ebolavirus (strain Gabon-94) (ZEBOV) (Zaire Ebola virus)
VGP_EBORE
Reston ebolavirus (strain Philippines-96) (REBOV) (Reston Ebola virus)
VGP_EBORR
Reston ebolavirus (strain Reston-89) (REBOV) (Reston Ebola virus)
VGP_EBORS
Reston ebolavirus (strain Siena/Philippine-92) (REBOV) (Reston Ebola virus)
VGP_EBOSB
Sudan ebolavirus (strain Boniface-76) (SEBOV) (Sudan Ebola virus)
VGP_EBOSM
Sudan ebolavirus (strain Maleo-79) (SEBOV) (Sudan Ebola virus)
VGP_EBOSU
Sudan ebolavirus (strain Uganda-00) (SEBOV) (Sudan Ebola virus)
VGP_EBOZ5
Zaire ebolavirus (strain Kikwit-95) (ZEBOV) (Zaire Ebola virus)
VGP_TAFVC
Tai Forest ebolavirus (strain Cote d'Ivoire-94) (TAFV) (Cote d'Ivoire Ebola virus)

1 entry

Major capsid protein VP1 (Major structural protein VP1)

VP1_POVJC
JC polyomavirus (JCPyV) (JCV) reference strain

8 entries

Outer capsid protein VP2

Select_allDeselect_all
VP2_BTV10
Bluetongue virus 10 (isolate USA) (BTV 10) reference strain
VP2_BTV11
Bluetongue virus 11 (isolate USA) (BTV 11)
VP2_BTV13
Bluetongue virus 13 (isolate USA) (BTV 13)
VP2_BTV17
Bluetongue virus 17 (isolate USA) (BTV 17)
VP2_BTV1A
Bluetongue virus 1 (isolate Australia) (BTV 1)
VP2_BTV1S
Bluetongue virus 1 (isolate South Africa) (BTV 1)
VP2_BTV1V
Bluetongue virus 1 (isolate South Africa vaccine) (BTV 1)
VP2_BTV3V
Bluetongue virus 3 (isolate South Africa vaccine) (BTV 3)