RNA-directed RNA polymerase

Virally encoded enzyme (EC 2.7.7.48) which synthesizes RNA using RNA as a template. This enzyme activity is necessary for the viral genome replication and transcription of most RNA viruses.

Matching UniProtKB/Swiss-Prot entries

783 entries grouped by protein (browse by keywords)

reorder by strain

1 entry

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (194 kDa protein) (RNA-directed RNA polymerase)

116 entries

RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase)

L_ABLVB

Australian bat lyssavirus (isolate Bat/AUS/1996) (ABLV) reference strain

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_AMPV1

Avian metapneumovirus (isolate Canada goose/Minnesota/15a/2001) (AMPV) reference strain

L_BDV1

Borna disease virus 1 (BoDV-1) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_BDVV

Borna disease virus (strain V) (BDV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_BEFVB

Bovine ephemeral fever virus (strain BB7721) (BEFV) reference strain

L_BRSVA

Bovine respiratory syncytial virus (strain A51908) (BRS) reference strain

L_BUNL8

Bunyavirus La Crosse (isolate Human/United States/L78/1978) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_BUNYW

Bunyamwera virus (BUNV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_CCHFI

Crimean-Congo hemorrhagic fever virus (strain Nigeria/IbAr10200/1970) (CCHFV) reference strain

3PHU; 3PHW; 3PHX; 3ZNH; 5V5G; 5V5H; 5V5I

L_CDVO

Canine distemper virus (strain Onderstepoort) (CDV) reference strain

L_CHAV

Chandipura virus (strain I653514) (CHPV) reference strain

L_CHAVB

Chapare mammarenavirus (isolate Human/Bolivia/810419/2003) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_CPSVP

Citrus psorosis virus (isolate Spain/P-121) (CPsV) (Citrus ringspot virus) reference strain

L_DMSVA

Drosophila melanogaster sigma virus (isolate Drosophila/USA/AP30/2005) (DMelSV) reference strain

L_DUGBA

Dugbe virus (isolate ArD44313) (DUGV) reference strain

4HXD

L_EBLV1

European bat lyssavirus 1 (strain Bat/Germany/RV9/1968) (EBLV1) reference strain

L_EBLV2

European bat lyssavirus 2 (strain Human/Scotland/RV1333/2002) (EBLV2) reference strain

L_EBOSU

Sudan ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV) (Sudan Ebola virus) reference strain

L_EBOZM

Zaire ebolavirus (strain Mayinga-76) (ZEBOV) (Zaire Ebola virus) reference strain

L_EMARV

European mountain ash ringspot-associated virus (isolate Sorbus aucuparia) (EMARAV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_GOGV

Alethinophid 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009) (Golden Gate virus) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_GTOVV

Guanarito mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_HANTV

Hantaan virus (strain 76-118) (Korean hemorrhagic fever virus) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

5IZE

L_HENDH

Hendra virus (isolate Horse/Autralia/Hendra/1994) reference strain

L_HIRRV

Hirame rhabdovirus (strain Korea/CA 9703/1997) (HIRRV) reference strain

L_HMPVC

Human metapneumovirus (strain CAN97-83) (HMPV) reference strain

4UCJ; 6U5O

L_HRSVA

Human respiratory syncytial virus A (strain A2) reference strain

6PZK; 6UEN

L_HRSVB

Human respiratory syncytial virus B (strain B1) reference strain

L_IHNVW

Infectious hematopoietic necrosis virus (strain WRAC) (IHNV) reference strain

L_ISFV

Isfahan virus (ISFV) reference strain

L_LASSJ

Lassa virus (strain Mouse/Sierra Leone/Josiah/1976) (LASV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_LATVB

Latino mammarenavirus (isolate Rat/Bolivia/MARU 1924/1965) (LATV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_LBVAV

Lettuce big-vein associated virus (isolate Japan/Kagawa) (LBVaV) reference strain

L_LNYV3

Lettuce necrotic yellows virus (isolate 318) (LNYV) reference strain

L_LYCVA

Lymphocytic choriomeningitis virus (strain Armstrong) (LCMV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

3JSB; 5LTF; 5LTN; 5LTS; 5T2T

L_MABVM

Lake Victoria marburgvirus (strain Musoke-80) (MARV) (Marburg virus (strain Kenya/Musoke/1980)) reference strain

L_MEASA

Measles virus (strain Edmonston-AIK-C vaccine) (MeV) (Subacute sclerose panencephalitis virus) reference strain

L_MEASC

Measles virus (strain Ichinose-B95a) (MeV) (Subacute sclerose panencephalitis virus) reference strain

L_MEASE

Measles virus (strain Edmonston) (MeV) (Subacute sclerose panencephalitis virus) reference strain

L_MMVR

Maize mosaic virus (isolate Maize/United States/Reed/2005) (MMV) reference strain

L_MOKV

Mokola virus (MOKV) reference strain

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_MPV15

Murine pneumonia virus (strain 15) (MPV) reference strain

L_MUMPM

Mumps virus (strain Miyahara vaccine) (MuV) reference strain

L_NDVB1

Newcastle disease virus (strain Chicken/United States/B1/48) (NDV) reference strain

L_NIPAV

Nipah virus reference strain

L_PARVP

Parana mammarenavirus (isolate Rat/Paraguay/12056/1965) (PARV) (Paran mammarenavirus) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_PI2HT

Human parainfluenza 2 virus (strain Toshiba) (HPIV-2) reference strain

L_PIRVV

Pirital mammarenavirus (isolate Rat/Venezuela/VAV-488/1995) (PIRV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_PIV5

Parainfluenza virus 5 (strain W3) (PIV5) (Simian virus 5) reference strain

6V85; 6V86

L_PUUMS

Puumala virus (strain Sotkamo/V-2969/81) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_RABVH

Rabies virus (strain HEP-Flury) (RABV) reference strain

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_RABVP

Rabies virus (strain Pasteur vaccins / PV) (RABV) reference strain

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_RABVS

Rabies virus (strain SAD B19) (RABV) reference strain

Large structural protein (Protein L) (Replicase) (Transcriptase)

6UEB

L_RVFVZ

Rift valley fever virus (strain ZH-548 M12) (RVFV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_RYSV

Rice yellow stunt virus (RYSV) (Rice transitory yellowing virus) reference strain

L_SENDA

Sendai virus (strain Hamamatsu) (SeV) reference strain

L_SENDO

Sendai virus (strain Ohita) (SeV) reference strain

L_SHRV

Snakehead rhabdovirus (SHRV) reference strain

L_SV41

Simian virus 41 (SV41) reference strain

L_SVCV

Spring viremia of carp virus (Rhabdovirus carpia) reference strain

5H5Z; 5Y91

L_SYNV

Sonchus yellow net virus (SYNV) reference strain

L_TACVF

Tacaribe virus (strain Franze-Fernandez) (TCRV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_TAMVU

Tamiami mammarenavirus (isolate Rat/United States/W 10777/1964) (TAMV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_TAVCV

Taro vein chlorosis virus (TAVCV) reference strain

L_TIBVC

Tibrogargan virus (strain CS132) (TIBV) reference strain

L_TSWV1

Tomato spotted wilt virus (strain Brazilian Br-01) (TSWV) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_TUPVT

Tupaia virus (isolate Tupaia/Thailand/-/1986) (TUPV) reference strain

L_UUKS

Uukuniemi virus (strain S23) (Uuk) reference strain

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_VSIVA

Vesicular stomatitis Indiana virus (strain San Juan) (VSIV) reference strain

5A22; 6U1X

L_ABLVH

Australian bat lyssavirus (isolate Human/AUS/1998) (ABLV)

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_ALLVP

Allpahuayo mammarenavirus (isolate Rat/Peru/CLHP-2472/1997) (ALLV)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_BCNVU

Bear Canyon mammarenavirus (isolate Mouse/United States/AV A0070039/2000) (BCNV)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_BUNLC

Bunyavirus La Crosse

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

2XI5; 2XI7; 5AMQ; 5AMR; 6Z6B; 6Z6G; 6Z8K

L_CPXVB

Cupixi mammarenavirus (isolate Rat/Brasil/BeAn 119303/1970) (CPXV)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_EBORE

Reston ebolavirus (strain Philippines-96) (REBOV) (Reston Ebola virus)

L_EBORR

Reston ebolavirus (strain Reston-89) (REBOV) (Reston Ebola virus)

L_EBOSM

Sudan ebolavirus (strain Maleo-79) (SEBOV) (Sudan Ebola virus)

L_EBOZ5

Zaire ebolavirus (strain Kikwit-95) (ZEBOV) (Zaire Ebola virus)

L_HRSVL

Human respiratory syncytial virus A (strain Long)

L_IHNVO

Infectious hematopoietic necrosis virus (strain Oregon69) (IHNV)

L_IPPYV

Ippy mammarenavirus (isolate Rat/Central African Republic/Dak An B 188 d/1970) (IPPYV)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_JUNIN

Junin mammarenavirus (JUNV) (Junn mammarenavirus)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_MABVA

Lake Victoria marburgvirus (strain Angola/2005) (MARV)

L_MABVO

Lake Victoria marburgvirus (strain Ozolin-75) (MARV) (Marburg virus (strain South Africa/Ozolin/1975))

L_MABVP

Lake Victoria marburgvirus (strain Popp-67) (MARV) (Marburg virus (strain West Germany/Popp/1967))

L_MABVR

Lake Victoria marburgvirus (strain Ravn-87) (MARV) (Marburg virus (strain Kenya/Ravn/1987))

L_MACHU

Machupo virus (MACV)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_MILVL

Mirafiori lettuce virus (isolate Lettuce/Netherlands/LS301-O) (MiLV) (Mirafiori lettuce big-vein virus)

L_MOBVC

Mobala mammarenavirus (isolate Rat/Central African Republic/Acar 3080/1983) (MOBV)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_NDVB

Newcastle disease virus (strain Beaudette C/45) (NDV)

L_OLVVA

Oliveros mammarenavirus (isolate Mouse/Argentina/RIID 3229/1990) (OLVV)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_PI3H4

Human parainfluenza 3 virus (strain Wash/47885/57) (HPIV-3) (Human parainfluenza 3 virus (strain NIH 47885))

L_PIV5W

Parainfluenza virus 5 (strain 21004-WR) (PIV5) (Simian virus 5)

L_PUUMG

Puumala virus (strain Bank vole/Russia/CG1820/1984)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_RABVA

Rabies virus (strain PM1503/AVO1) (RABV)

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_RABVB

Rabies virus (strain silver-haired bat-associated) (RABV) (SHBRV)

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_RABVD

Rabies virus (strain China/DRV) (RABV)

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_RABVE

Rabies virus (strain ERA) (RABV)

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_RABVI

Rabies virus (strain India) (RABV)

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_RABVN

Rabies virus (strain Nishigahara RCEH) (RABV)

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_RABVR

Rabies virus (strain China/MRV) (RABV)

Large structural protein (Protein L) (Replicase) (Transcriptase)

L_RINDR

Rinderpest virus (strain RBOK) (RDV)

L_SABVB

Sabia mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV) (Sabi mammarenavirus)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

L_SBVBH

Bovine Schmallenberg virus (isolate Bovine/BH80/Germany/2011) (SBV)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_SENDE

Sendai virus (strain Enders) (SeV)

L_SENDF

Sendai virus (strain Fushimi) (SeV)

L_SENDZ

Sendai virus (strain Z) (SeV) (Sendai virus (strain HVJ))

L_SEOU8

Seoul virus (strain 80-39)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

L_TOSV

Toscana virus (Tos)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (Large structural protein) (Replicase) (Transcriptase)

6QVV; 6QW0; 6QW5

L_VSIVC

Vesicular stomatitis Indiana virus (strain 94GUB Central America) (VSIV)

L_VSIVM

Vesicular stomatitis Indiana virus (strain Mudd-Summers) (VSIV)

5CHS

L_VSIVN

Vesicular stomatitis Indiana virus (strain 98COE North America) (VSIV)

L_VSIVS

Vesicular stomatitis Indiana virus (strain 85CLB South America) (VSIV)

L_VSNJH

Vesicular stomatitis New Jersey virus (strain Hazelhurst subtype Hazelhurst) (VSNJV)

L_VSNJO

Vesicular stomatitis New Jersey virus (strain Ogden subtype Concan) (VSNJV)

L_WWAVU

Whitewater Arroyo mammarenavirus (isolate Rat/United States/AV 9310135/1995) (WWAV)

RNA-directed RNA polymerase L (Protein L) (EC 2.7.7.48) (EC 3.1.-.-) (Large structural protein) (Replicase) (Transcriptase)

9 entries

Non-structural polyprotein 1AB

NS1AB_HASV1

Human astrovirus-1 (HAstV-1) reference strain

NS1AB_TASV1

Turkey astrovirus 1 (TAstV-1) reference strain

NS1AB_ANV1

Avian nephritis virus 1 (ANV-1)

NS1AB_HASV4

Human astrovirus-4 (HAstV-4)

NS1AB_HASV5

Human astrovirus-5 (HAstV-5)

NS1AB_HASV8

Human astrovirus-8 (HAstV-8)

NS1AB_MASV1

Mink astrovirus 1 (MAstV-1)

NS1AB_OASV1

Ovine astrovirus 1 (OAstV-1)

NS1AB_TASV2

Turkey astrovirus 2 (TAstV-2)

1 entry

Polyprotein

23 entries

RNA1 polyprotein (P1)

POL1_BAYMY

Barley yellow mosaic virus (isolate China/Yancheng/1998) (BaYMV) reference strain

Genome polyprotein 1

POL1_BBWVS

Broad bean wilt virus 1 (strain Spinach/United States/ATCC PV-132/1963) (BBWV-1) reference strain

RNA1 polyprotein (Genome polyprotein B)

POL1_CPMVS

Cowpea mosaic virus (strain SB) (CPMV) reference strain

RNA1 polyprotein (B RNA polyprotein) (Bottom component polyprotein) (Genome polyprotein B) (P1)

POL1_CRLVP

Cherry rasp leaf virus (isolate Potato/United States) (CRLV) reference strain

RNA1 polyprotein (Genome polyprotein B) (P1)

POL1_SDVS5

Satsuma dwarf virus (isolate Satsuma mandarin/Japan/S-58/1977) (SDV) reference strain

POL1_TORVR

Tomato ringspot virus (isolate raspberry) (ToRSV) reference strain

POL1_TOTV

Tomato torrado virus (isolate Solanum lycopersicum/Spain/PRIToTV0301/-) (ToTV) reference strain

RNA1 polyprotein

POL1_ARMVN

Arabis mosaic virus (isolate NW) (ArMV)

POL1_BAMMN

Barley mild mosaic virus (strain Na1) (BaMMV)

Genome polyprotein 1

POL1_BAYMG

Barley yellow mosaic virus (isolate Germany) (BaYMV)

Genome polyprotein 1

POL1_BAYMJ

Barley yellow mosaic virus (strain Japanese II-1) (BaYMV)

Genome polyprotein 1

POL1_BBWV2

Broad bean wilt virus 2 (BBWV-2)

RNA1 polyprotein (Genome polyprotein B)

POL1_BPMV

Bean-pod mottle virus (strain Kentucky G7) (BPMV)

RNA1 polyprotein (Genome polyprotein B) (P1)

POL1_BRAV

Blackcurrant reversion association virus (BRAV)

POL1_BRSV

Beet ringspot virus (BRSV) (Tomato black ring virus (strain S))

POL1_CNSV

Cycas necrotic stunt virus (CNSV)

POL1_CPSMV

Cowpea severe mosaic virus (strain DG) (CPSMV)

RNA1 polyprotein (Genome polyprotein B) (P1)

POL1_GCMV

Grapevine chrome mosaic virus (GCMV) (Hungarian grapevine chrome mosaic virus)

POL1_GFLV

Grapevine fanleaf virus (GFLV)

POL1_RCMV

Red clover mottle virus (RCMV)

RNA1 polyprotein (Genome polyprotein B) (P1)

POL1_RRVC

Raspberry ringspot virus (strain cherry) (RpRSV)

POL1_TBRVM

Tomato black ring virus (strain MJ) (TBRV)

POL1_TRSVB

Tobacco ringspot virus (strain Bud Blight) (TobRV) (TRSV)

2 entries

ORFB polyprotein

POLB_CHPVE

Cryphonectria hypovirus 1 (strain EP713) (CHV-1/EP713) (Chestnut blight fungus hypovirulence-associated virus) reference strain

POLB_CHPVU

Cryphonectria hypovirus 1 (strain Euro7) (CHV-1/Euro7) (Chestnut blight fungus hypovirulence-associated virus) reference strain

1 entry

Polyprotein-FSD

236 entries

Genome polyprotein

POLG_AEVCA

Avian encephalomyelitis virus (strain Calnek vaccine) (AEV) reference strain

POLG_AIVA8

Aichi virus (strain Human/A846/88/1989) (AiV) (Aichi virus (strain A846/88)) reference strain

5AOO; 5GKA; 5LVC; 5LZ3

POLG_ASGVP

Apple stem grooving virus (strain P-209) (ASGV) reference strain

Genome polyprotein (241 kDa polyprotein) (ORF1 polyprotein)

POLG_BECN1

Bovine enteric calicivirus Newbury agent-1 (isolate Bovine/UK/Newbury1/1976) (BEC) reference strain

POLG_BSTV1

Brome streak virus (strain 11-Cal) (BStV) (Brome streak mosaic rymovirus) reference strain

POLG_BVDVN

Bovine viral diarrhea virus (isolate NADL) (BVDV) (Mucosal disease virus) reference strain

1S48; 1S49; 1S4F; 4ILD; 4JNT; 5GVU; 5WSO

POLG_BVY3

Blackberry virus Y (isolate Blackberry plant/USA:Arkansas/C3ARK/2005) (BVY) reference strain

POLG_CILVC

Citrus leprosis virus C (isolate Citrus sinesis/Brazil/Cordeiropolis/2003) (CiLV-C) reference strain

RNA replication protein

POLG_COSAA

Cosavirus A (isolate Human/Pakistan/0553/-) (HCoSV-A) reference strain

POLG_DEN1W

Dengue virus type 1 (strain Nauru/West Pac/1974) (DENV-1) reference strain

3J8D; 3L6P; 3LKW; 4AL8; 4GSX; 4GT0; 4LCY; 4OIG; 5VIC; 5WJL; 5WKF

POLG_EMCVR

Encephalomyocarditis virus (strain Rueckert) (EMCV) reference strain

POLG_FCVUR

Feline calicivirus (strain Cat/United States/Urbana/1960) (FCV) reference strain

POLG_HAVHM

Human hepatitis A virus genotype IB (isolate HM175) (HHAV) (Human hepatitis A virus (isolate Human/Australia/HM175/1976)) reference strain

1HAV; 1QA7; 2H6M; 2H9H; 2HAL; 4QPG; 4QPI; 4WZN; 5WTE; 5WTF; 5WTH

POLG_HCV77

Hepatitis C virus genotype 1a (isolate H77) (HCV) reference strain

1A1R; 1A1V; 1CWX; 1HEI; 1JR6; 1N1L; 1ONB; 1R7C; 1R7D; 1R7E; 1R7F; 1R7G; 1RGQ; 2A4R; 2F9V; 2HD0; 2JXF; 2KDR; 2N1P; 2O8M; 2OBO; 2OBQ; 2OC0; 2OC1; 2OC7; 2OC8; 2OIN; 2P59; 2QV1; 2XI2; 2XI3; 2XNI; 3RC4; 3RC5; 4CL1; 4JZN; 4JZO; 4MWF; 4N0Y; 4Q0X; 4XVJ; 4Z0X; 5EOC; 5ERW; 5FGB; 5FGC; 5JZI; 5YXN; 5YXU; 6BQJ; 6BQK; 6BZU; 6BZV; 6BZW; 6BZY; 6UYD; 6WO5; 6WOQ

POLG_HPE2W

Human parechovirus 2 (strain Williamson) (HPeV-2) (Echovirus 23) reference strain

POLG_HRV8A

Human rhinovirus A serotype 89 (strain 41467-Gallo) (HRV-89) reference strain

POLG_MRFVC

Maize rayado fino virus (isolate Costa Rica/Guapiles) (MRFV) reference strain

POLG_NVN68

Norwalk virus (strain GI/Human/United States/Norwalk/1968) (Hu/NV/NV/1968/US) reference strain

2FYQ; 2FYR; 2LNC; 3UR6; 3UR9; 4IMQ; 4IMZ; 4IN1; 4IN2; 4INH; 4XBB; 4XBC; 4XBD; 5DG6; 5DGJ; 5E0G; 5E0H; 5E0J; 5T6D; 5T6F; 5T6G; 5TG1; 5TG2; 5WEJ; 6BIB; 6BIC; 6BID; 6W5H; 6W5J; 6W5K; 6W5L

POLG_POL1M

Poliovirus type 1 (strain Mahoney) reference strain

1AL2; 1AR6; 1AR7; 1AR8; 1AR9; 1ASJ; 1DGI; 1FPT; 1HXS; 1L1N; 1NG7; 1NN8; 1PO1; 1PO2; 1POV; 1RA6; 1RA7; 1RAJ; 1RDR; 1TQL; 1VBD; 1XYR; 2BBL; 2BBP; 2IJD; 2IJF; 2ILY; 2ILZ; 2IM0; 2IM1; 2IM2; 2IM3; 2PLV; 3EPC; 3IYB; 3IYC; 3J3O; 3J3P; 3J48; 3J8F; 3J9F; 3JBC; 3JBD; 3JBE; 3JBF; 3JBG; 3OL7; 4DCD; 4K4S; 4K4T; 4K4U; 4K4V; 4K4W; 4NLO; 4NLP; 4NLQ; 4NLR; 4NLS; 4NLT; 4NLU; 4NLV; 4NLW; 4NLX; 4NLY; 4R0E; 5KTZ; 5KU0; 5KU2; 5KWL; 5Z3Q; 6HLV; 6P9O; 6P9W; 6PSZ

POLG_PVYN

Potato virus Y (strain N) (PVY) reference strain

POLG_PYFV1

Parsnip yellow fleck virus (isolate P-121) (PYFV) reference strain

POLG_RGMVD

Ryegrass mosaic virus (isolate Denmark/Danish) (RGMV) reference strain

POLG_RHDVF

Rabbit hemorrhagic disease virus (strain Rabbit/Germany/FRG/1989) (Ra/LV/RHDV/GH/1989/GE) (RHDV-FRG) reference strain

Genome polyprotein (p254)

1KHV; 1KHW; 6M24; 6M2J; 6M2K

POLG_RTSVA

Rice tungro spherical virus (strain A) (RTSV) (Rice tungro spherical waikavirus) reference strain

POLG_SALVA

Salivirus A (isolate Human/Nigeria/NG-J1/2007) (SV-A) reference strain

POLG_SPMMV

Sweet potato mild mottle virus (isolate Salazar) (SPMMV) reference strain

POLG_SVSAP

Sapporo virus (isolate GI/Human/Germany/pJG-Sap01) (Hu/Dresden/pJG-Sap01/DE) reference strain

POLG_SVV1

Seneca Valley virus (isolate -/United States/SSV-001/2002) (SVV) reference strain

3CJI; 6ADL; 6L0T

POLG_TRMVU

Triticum mosaic virus (isolate Triticum aestivum/United States/U06-123/2006) (TriMV) reference strain

POLG_VESVA

Vesicular exanthema of swine virus serotype A48 (isolate Swine/United States/A48/1948) (VESV) reference strain

POLG_YEFV1

Yellow fever virus (strain 17D vaccine) (YFV) reference strain

1NA4; 1YKS; 3EVA; 3EVB; 3EVC; 3EVD; 3EVE; 3EVF; 5FFM; 5N6B; 6EPK; 6IW0; 6IW1; 6IW2; 6IW4; 6QSN; 6SS7; 6SS8; 6SS9; 6SSA

POLG_ZIKV

Zika virus (ZIKV) reference strain

5GJ4; 5GPI; 5GXJ; 5JPS; 5JRZ; 5K6K; 5RHG; 5RHH; 5RHI; 5RHJ; 5RHK; 5RHL; 5RHM; 5RHO; 5RHP; 5RHQ; 5RHR; 5RHS; 5RHT; 5RHU; 5RHV; 5RHW; 5RHX; 5RHY; 5T1V; 5TFN; 5TFO; 5TFR; 5TMH; 5U04; 5U0B; 5U0C; 5VI7; 5VIM; 5W41; 5Y4Z; 5YOD; 5YOF; 5Z0R; 5Z0V; 5ZMQ; 5ZMS; 5ZOB; 6ADW; 6ADX; 6ADY; 6JPW; 6KK2; 6KK3; 6KK4; 6KK5; 6KK6; 6KPQ; 6L50; 6MH3; 6UX2; 6WCZ; 6Y3B

POLG_AEVL2

Avian encephalomyelitis virus (strain L2Z) (AEV)

POLG_AEVVR

Avian encephalomyelitis virus (strain Van Reokel) (AEV)

POLG_ALKV

Alkhumra hemorrhagic fever virus (ALKV) (Alkhurma hemorrhagic fever virus)

POLG_ASGVK

Apple stem grooving virus (strain Korea) (ASGV)

Genome polyprotein (241 kDa polyprotein) (ORF1 polyprotein)

POLG_BANV

Banzi virus (BANV)

POLG_BCMNN

Bean common mosaic necrosis virus (strain NL-3) (BCMNV) (Bean common mosaic virus serotype A (strain NL-3))

POLG_BECNB

Bovine enteric calicivirus NB (isolate Bovine/United States/Nebraska/1980) (BEC-NB)

POLG_BOVEV

Bovine enterovirus (strain VG-5-27) (BEV)

1BEV

POLG_BTMV

Beet mosaic virus (BtMV)

POLG_BUSV

Bussuquara virus (BUSV)

POLG_BVDVC

Bovine viral diarrhea virus (strain CP7) (BVDV) (Mucosal disease virus)

2AJJ; 2AJM; 2AJN; 2AJO; 2CJQ; 4DVK; 4DVL; 4DVN; 4DW3; 4DW4; 4DW5; 4DW7; 4DWA; 4DWC

POLG_BVDVS

Bovine viral diarrhea virus (strain SD-1) (BVDV) (Mucosal disease virus)

2YQ2; 2YQ3

POLG_BYMV

Bean yellow mosaic virus

POLG_CACV4

Canine calicivirus (strain 48) (CaCV)

POLG_CSFVA

Classical swine fever virus (strain Alfort) (CSFV) (Hog cholera virus)

4CBG; 4CBH; 4CBI; 4CBL; 4CBM; 5MZ4

POLG_CSFVB

Classical swine fever virus (strain Brescia) (CSFV) (Hog cholera virus)

POLG_CX16G

Coxsackievirus A16 (strain G-10)

POLG_CX16T

Coxsackievirus A16 (strain Tainan/5079/98)

4MG3; 5C8C; 6LHT

POLG_CXA21

Coxsackievirus A21 (strain Coe)

1Z7S; 1Z7Z

POLG_CXA24

Coxsackievirus A24 (strain EH24/70)

POLG_CXA9

Coxsackievirus A9 (strain Griggs)

1D4M; 3J2J

POLG_CXB1J

Coxsackievirus B1 (strain Japan)

POLG_CXB2O

Coxsackievirus B2 (strain Ohio-1)

POLG_CXB3N

Coxsackievirus B3 (strain Nancy)

2VB0; 2ZTX; 2ZTY; 2ZTZ; 2ZU1; 2ZU3; 3CDU; 3CDW; 4WFX; 4WFY; 4WFZ; 4Y2A

POLG_CXB3W

Coxsackievirus B3 (strain Woodruff)

1COV; 1JEW; 3JD7

POLG_CXB4E

Coxsackievirus B4 (strain E2)

POLG_CXB4J

Coxsackievirus B4 (strain JVB / Benschoten / New York/51)

1Z8R

POLG_CXB5P

Coxsackievirus B5 (strain Peterborough / 1954/UK/85)

POLG_CXB6S

Coxsackievirus B6 (strain Schmitt)

POLG_DEN1B

Dengue virus type 1 (strain Brazil/97-11/1997) (DENV-1)

3UZQ

POLG_DEN1S

Dengue virus type 1 (strain Singapore/S275/1990) (DENV-1)

3L6P; 3LKW

POLG_DEN26

Dengue virus type 2 (strain Thailand/16681/1984) (DENV-2)

2R69; 4O6B

POLG_DEN27

Dengue virus type 2 (strain 16681-PDK53) (DENV-2)

2R29; 3EVG; 6FLA

POLG_DEN28

Dengue virus type 2 (isolate Thailand/0168/1979) (DENV-2)

1P58; 2M9P; 2M9Q; 3C6D

POLG_DEN2J

Dengue virus type 2 (strain Jamaica/1409/1983) (DENV-2)

3UZV; 6VG5; 6VSO

POLG_DEN2N

Dengue virus type 2 (strain Thailand/NGS-C/1944) (DENV-2)

3IYA; 3J27; 3J2P; 4CBF; 4UIH; 6FLA; 6FLB; 6FLC; 6IZX; 6IZY

POLG_DEN2P

Dengue virus type 2 (strain Puerto Rico/PR159-S1/1969) (DENV-2)

1L9K; 1OAN; 1OK8; 1OKE; 1P58; 1R6A; 1R6R; 1THD; 2P1D; 2P3L; 2P3O; 2P3Q; 2P40; 2P41; 3J8D; 3ZKO; 4M9F; 4M9I; 4M9K; 4M9M; 4M9T; 5HHG

POLG_DEN2Q

Dengue virus type 2 (strain Peru/IQT2913/1996) (DENV-2)

3IXY

POLG_DEN3C

Dengue virus type 3 (strain China/80-2/1980) (DENV-3)

POLG_DEN3I

Dengue virus type 3 (strain Singapore/8120/1995) (DENV-3)

3U1I; 3U1J; 4CTJ; 4CTK; 4V0Q; 4V0R

POLG_DEN3M

Dengue virus type 3 (strain Martinique/1243/1999) (DENV-3)

POLG_DEN3P

Dengue virus type 3 (strain Philippines/H87/1956) (DENV-3)

1UZG; 2J7U; 2J7W; 3P8Z; 3P97; 3UZE; 3VTT; 5CCV; 5E9Q; 5EC8; 5EHG; 5EHI; 5EIF; 5EIW; 5EKX

POLG_DEN3S

Dengue virus type 3 (strain Sri Lanka/1266/2000) (DENV-3)

2J7U; 2J7W; 3VWS; 4C11; 4HHJ; 5DTO; 5EIW; 5F3T; 5F3Z; 5F41; 5HMW; 5HMX; 5HMY; 5HMZ; 5HN0; 5I3P; 5I3Q; 5IQ6; 5JJR; 5JJS; 5WJN; 5WKH; 6H80; 6H9R; 6XD0; 6XD1

POLG_DEN4D

Dengue virus type 4 (strain Dominica/814669/1981) (DENV-4)

2H0P; 3UAJ; 3UC0; 3WE1; 4X42; 5B1C

POLG_DEN4H

Dengue virus type 4 (strain Thailand/0476/1997) (DENV-4)

POLG_DEN4P

Dengue virus type 4 (strain Philippines/H241/1956) (DENV-4)

4AM0

POLG_DEN4S

Dengue virus type 4 (strain Singapore/8976/1995) (DENV-4)

POLG_DEN4T

Dengue virus type 4 (strain Thailand/0348/1991) (DENV-4)

2JLQ; 2JLR; 2JLS; 2JLU; 2JLV; 2JLW; 2JLX; 2JLY; 2JLZ; 2WHX; 2WZQ; 3UYP; 5YVV; 5YVW

POLG_EBHSG

European brown hare syndrome virus (strain GD) (Ha/LV/EBHSV/GD/1989/FR) (EBHSV-GD)

Genome polyprotein (p254)

POLG_EC01F

Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)

1EV1; 5IYT

POLG_EC05N

Echovirus 5 (strain Noyce)

POLG_EC06C

Echovirus 6 (strain Charles)

1Q1X

POLG_EC09B

Echovirus 9 (strain Barty)

POLG_EC09H

Echovirus 9 (strain Hill)

POLG_EC11G

Echovirus 11 (strain Gregory)

2C8I

POLG_EC12T

Echovirus 12 (strain Travis)

POLG_EC30B

Echovirus 30 (strain Bastianni)

POLG_EHV

Edge Hill virus (EHV)

POLG_EMCV

Encephalomyocarditis virus

POLG_EMCVB

Encephalomyocarditis virus (strain emc-b nondiabetogenic)

POLG_EMCVD

Encephalomyocarditis virus (strain emc-d diabetogenic)

POLG_ENMGO

Mengo encephalomyocarditis virus

1MEC; 2M7Y; 2MEV; 2MMH; 2MMI; 2MMK; 2MML; 4NYZ; 4NZ0; 4Y2C; 4Y3C

POLG_FCVC6

Feline calicivirus (strain CFI/68 FIV) (FCV)

POLG_FCVF4

Feline calicivirus (strain Japanese F4) (FCV)

POLG_FCVF9

Feline calicivirus (strain F9) (FCV)

2M4H

POLG_FMDV1

Foot-and-mouth disease virus (strain A10-61) (Aphthovirus A) (FMDV)

1ZBA; 1ZBE; 2BHG; 2J92; 2WV4; 2WV5

POLG_FMDV5

Foot-and-mouth disease virus (isolate -/Germany/A5Westerwald/1951 serotype A) (FMDV)

POLG_FMDVA

Foot-and-mouth disease virus (isolate Bovine/United Kingdom/A12Valle119/1932 serotype A) (FMDV)

1BCV

POLG_FMDVC

Foot-and-mouth disease virus (isolate Bovine/Brazil/A24Cruzeiro/1955 serotype A) (FMDV)

POLG_FMDVI

Foot-and-mouth disease virus (isolate -/Brazil/C3Indaial/1971 serotype C) (FMDV)

POLG_FMDVO

Foot-and-mouth disease virus (isolate Bovine/Germany/O1Kaufbeuren/1966 serotype O) (FMDV)

1QMY; 1QOL; 1QQP; 2JQF; 2JQG; 4QBB; 6FFA

POLG_FMDVS

Foot-and-mouth disease virus (isolate -/Spain/S8c1SantaPau/1970 serotype C) (FMDV)

1QGC; 4WYL; 4WYW; 4WZM; 4WZQ; 4X2B; 5JXS; 5N8X; 5N95; 6GVV; 6GVY; 6KWK; 6KWL; 6S2L

POLG_FMDVT

Foot-and-mouth disease virus (isolate -/Germany/C1Oberbayen/1960 serotype C) (FMDV)

1EJO; 1FMD; 1QGC

POLG_FMDVZ

Foot-and-mouth disease virus (isolate -/Azerbaijan/A22-550/1965 serotype A) (FMDV)

1FMD; 6A6H

POLG_GBVB

Hepatitis GB virus B (GBV-B) (GB virus B)

2LZP; 2LZQ; 2MKB

POLG_HAV88

Human hepatitis A virus genotype IIB (isolate SLF88) (HHAV) (Human hepatitis A virus (isolate Human/Sierra Leone/SLF88/1988))

POLG_HAVCF

Human hepatitis A virus genotype IIA (isolate CF-53) (HHAV) (Human hepatitis A virus (isolate Human/France/CF-53/1979))

POLG_HAVGB

Human hepatitis A virus genotype IA (isolate GBM) (HHAV) (Human hepatitis A virus (isolate Human/Germany/GBM/1976))

POLG_HAVH2

Human hepatitis A virus genotype IA (isolate H2) (HHAV) (Human hepatitis A virus (isolate Human/China/H2/1982))

POLG_HAVJ8

Human hepatitis A virus genotype IIIB (isolate HAJ85-1) (HHAV) (Human hepatitis A virus (isolate Human/Japan/HAJ85-1/1985))

POLG_HAVLA

Human hepatitis A virus genotype IA (isolate LA) (HHAV) (Human hepatitis A virus (isolate Human/Northern California/LA/1974))

POLG_HAVMB

Human hepatitis A virus genotype IB (isolate MBB) (HHAV) (Human hepatitis A virus (isolate Human/Northern Africa/MBB/1978))

2A4O; 2CXV

POLG_HAVNO

Human hepatitis A virus genotype IIIA (isolate NOR-21) (HHAV) (Human hepatitis A virus (isolate Human/Norway/NOR-21/1998))

POLG_HAVS2

Simian hepatitis A virus genotype V (isolate AGM-27) (SHAV) (Simian hepatitis A virus (isolate Cercopithecus/Kenya/AGM-27/1985))

POLG_HCV1

Hepatitis C virus genotype 1a (isolate 1) (HCV)

1RTL; 2A4G; 2GVF; 3EYD; 3HKW; 3KN2; 3QGH; 3QGI; 3RC4; 3RC5; 3SU4; 6MVO; 6N4N

POLG_HCV6A

Hepatitis C virus genotype 6a (isolate 6a33) (HCV)

POLG_HCVBB

Hepatitis C virus genotype 2c (isolate BEBE1) (HCV)

POLG_HCVBK

Hepatitis C virus genotype 1b (isolate BK) (HCV)

1A1Q; 1BT7; 1C2P; 1CSJ; 1CU1; 1GX5; 1GX6; 1JXP; 1NHU; 1NHV; 1NS3; 1OS5; 1QUV; 2AWZ; 2AX0; 2AX1; 2BRK; 2BRL; 2DXS; 2GIQ; 2GIR; 2HAI; 2HWH; 2HWI; 2I1R; 2JC0; 2JC1; 2O5D; 2WCX; 2WHO; 2WRM; 2XWY; 2ZKU; 3BR9; 3BSA; 3BSC; 3CDE; 3CIZ; 3CJ0; 3CJ2; 3CJ3; 3CJ4; 3CJ5; 3CO9; 3CVK; 3CWJ; 3D28; 3D5M; 3E51; 3FQK; 3FRZ; 3G86; 3GYN; 3H2L; 3H59; 3H5S; 3H5U; 3H98; 3IGV; 3MF5; 3RVB; 3UA7; 3UDL; 3VQS; 4A92; 4B6E; 4B6F; 4B71; 4B73; 4B74; 4B75; 4B76; 4DGV; 4DGY; 4EO6; 4EO8; 4IH5; 4IH6; 4IH7; 4K8B; 4KAI; 4KB7; 4KBI; 4KE5; 4MIA; 4MIB; 4MK7; 4MK8; 4MK9; 4MKA; 4MKB; 4TN2; 4WXP; 5FPS; 5FPT; 5FPY; 5KZP; 5W2E; 6MVP; 6W4G; 8OHM

POLG_HCVCO

Hepatitis C virus genotype 1b (isolate Con1) (HCV)

1ZH1; 2JY0; 2KWT; 2KWZ; 3FQL; 3FQM; 3FQQ; 3KN2; 3KQH; 3KQK; 3KQL; 3KQN; 3KQU; 3Q0Z; 3QGD; 3QGE; 3QGF; 3QGG; 4NLD; 4U01; 5E4F; 5PZK; 5PZL; 5PZM; 5PZN; 5PZO; 5PZP; 5TRH; 5TRI; 5TRJ; 5TRK; 5TWN

POLG_HCVED

Hepatitis C virus genotype 4a (isolate ED43) (HCV)

6P6Z

POLG_HCVEU

Hepatitis C virus genotype 6a (isolate EUHK2) (HCV)

POLG_HCVEV

Hepatitis C virus genotype 5a (isolate EUH1480) (HCV)

2M6X

POLG_HCVH9

Hepatitis C virus genotype 1c (isolate HC-G9) (HCV)

POLG_HCVIN

Hepatitis C virus genotype 1c (isolate India) (HCV)

POLG_HCVJ1

Hepatitis C virus genotype 1b (isolate HC-J1) (HCV)

2KNU; 3MRG; 3MRH; 3MRI; 3MRJ; 3MRL

POLG_HCVJ4

Hepatitis C virus genotype 1b (strain HC-J4) (HCV)

1NB4; 1NB6; 1NB7; 2F55; 2MTS; 2XHU; 2XHV; 2XHW; 2YOJ; 3CSO; 3GNV; 3GNW; 3GOL; 3HKY; 3LKH; 3MWV; 3MWW; 3SKA; 3SKE; 3SKH; 3TYQ; 3TYV; 3U4O; 3U4R; 3UPH; 3UPI; 4DRU; 4EAW; 4GMC; 4IZ0; 4J02; 4J04; 4J06; 4J08; 4J0A; 4JJS; 4JJU; 4JTW; 4JTY; 4JTZ; 4JU1; 4JU2; 4JU3; 4JU4; 4JU6; 4JU7; 4JVQ; 4JY0; 4JY1; 4MZ4; 4OOW; 4RY4; 4RY5; 4RY6; 4RY7; 5CZB; 5NPH; 5NPI

POLG_HCVJ6

Hepatitis C virus genotype 2a (isolate HC-J6) (HCV)

1YUY; 1YV2; 1YVX; 1YVZ; 2XWH; 4ADP

POLG_HCVJ8

Hepatitis C virus genotype 2b (isolate HC-J8) (HCV)

1XCQ; 1XCT; 1XF5; 3GSZ; 3HVO

POLG_HCVJA

Hepatitis C virus genotype 1b (isolate Japanese) (HCV)

1DXP; 1DY8; 1DY9; 1W3C; 2K8J; 3OYP; 3P8N; 3P8O; 4A1T; 4A1V; 4A1X; 4I31; 4I32; 4I33; 4JMY; 4KTC

POLG_HCVJF

Hepatitis C virus genotype 2a (isolate JFH-1) (HCV)

2KZQ; 2LIF; 2LVG; 2XXD; 2XYM; 3I5K; 4AEP; 4AEX; 4E76; 4E78; 4E7A; 4J1V; 4OBC; 4WT9; 4WTA; 4WTC; 4WTD; 4WTE; 4WTF; 4WTG; 4WTI; 4WTJ; 4WTK; 4WTL; 4WTM; 5NPJ; 5QJ0; 5QJ1; 5TWM; 5UJ2; 6HT4

POLG_HCVJK

Hepatitis C virus genotype 3k (isolate JK049) (HCV)

POLG_HCVJL

Hepatitis C virus genotype 6g (isolate JK046) (HCV)

POLG_HCVJP

Hepatitis C virus genotype 2b (isolate JPUT971017) (HCV)

POLG_HCVJT

Hepatitis C virus genotype 1b (isolate HC-JT) (HCV)

POLG_HCVK3

Hepatitis C virus genotype 3a (isolate k3a) (HCV)

POLG_HCVNZ

Hepatitis C virus genotype 3a (isolate NZL1) (HCV)

6P6S

POLG_HCVR6

Hepatitis C virus genotype 1b (isolate HCR6) (HCV)

POLG_HCVSA

Hepatitis C virus genotype 5a (isolate SA13) (HCV)

POLG_HCVT5

Hepatitis C virus genotype 6b (isolate Th580) (HCV)

POLG_HCVTR

Hepatitis C virus genotype 3b (isolate Tr-Kj) (HCV)

POLG_HCVTW

Hepatitis C virus genotype 1b (isolate Taiwan) (HCV)

1N64; 2ZJO

POLG_HCVVA

Hepatitis C virus genotype 2k (isolate VAT96) (HCV)

POLG_HCVVN

Hepatitis C virus genotype 6d (isolate VN235) (HCV)

POLG_HCVVO

Hepatitis C virus genotype 6k (isolate VN405) (HCV)

POLG_HCVVP

Hepatitis C virus genotype 6h (isolate VN004) (HCV)

POLG_HE701

Human enterovirus 70 (strain J670/71) (EV70) (EV-70)

POLG_HE71

Human enterovirus 71 (EV71) (EV-71)

5GQ1; 5GRB

POLG_HE71B

Human enterovirus 71 (strain USA/BrCr/1970) (EV71) (EV-71)

POLG_HE71M

Human enterovirus 71 (strain 7423/MS/87) (EV71) (EV-71)

3W95; 6HLW; 6I2K

POLG_HED68

Human enterovirus D68 (EV68) (EV-68)

4WM7; 4WM8; 5BNN; 5BNO; 5BNP; 6HLN; 6HMV

POLG_HKV1

Human klassevirus 1 (HKV-1)

POLG_HPE1H

Human parechovirus 1 (strain Harris) (HPeV-1) (Echovirus 22)

4UDF; 4Z92; 5MJV

POLG_HPEV5

Human parechovirus 5 (strain CT86-6760) (HPeV-5) (Echovirus 23)

POLG_HRV14

Human rhinovirus 14 (HRV-14)

1D3I; 1HRI; 1HRV; 1K5M; 1NA1; 1NCQ; 1R08; 1R09; 1RMU; 1RUC; 1RUD; 1RUE; 1RUF; 1RUG; 1RUH; 1RUI; 1RUJ; 1RVF; 1VRH; 1XR5; 2B0F; 2HWB; 2HWC; 2IN2; 2R04; 2R06; 2R07; 2RM2; 2RMU; 2RR1; 2RS1; 2RS3; 2RS5; 4PDW; 4RHV; 5W3E; 5W3L; 5W3M; 5W3O; 6HLT; 6KYZ; 6KZ0

POLG_HRV16

Human rhinovirus 16 (HRV-16)

1AYM; 1AYN; 1C8M; 1D3E; 1NCR; 1ND2; 1ND3; 1QJU; 1QJX; 1QJY; 1TP7; 1XR7; 4K50

POLG_HRV1A

Human rhinovirus 1A (HRV-1A)

1AYM; 1AYN; 1R1A; 2HWD; 2HWE; 2HWF

POLG_HRV1B

Human rhinovirus 1B (HRV-1B)

1XR6

POLG_HRV2

Human rhinovirus 2 (HRV-2)

1A3R; 1CQQ; 1FPN; 1V9U; 2HRV; 2XYA; 3DPR; 3TN9; 3VDD; 4L3B; 5FX5; 5FX6; 6FFN; 6FFS

POLG_HRV3

Human rhinovirus 3 (HRV-3)

1RHI

POLG_ILHV

Ilheus virus (ILHV)

POLG_JAEV1

Japanese encephalitis virus (strain SA-14) (JEV)

2Z83; 3P54; 4HDG; 4HDH; 4K6M; 4MTP; 5MV1; 5MV2; 5O19; 5O36; 5OW2; 5WSN; 5YWO; 5YWP

POLG_JAEV5

Japanese encephalitis virus (strain SA(v)) (JEV)

POLG_JAEVJ

Japanese encephalitis virus (strain Jaoars982) (JEV)

2HYL; 2I84; 5YWO; 5YWP

POLG_JAEVM

Japanese encephalitis virus (strain M28) (JEV)

POLG_KFDV

Kyasanur forest disease virus (KFDV)

POLG_KOKV

Kokobera virus (KOKV)

2V6I; 2V6J

POLG_KUNJM

Kunjin virus (strain MRM61C)

1SFK; 2HCN; 2HCS; 2HFZ; 2OF6; 2QEQ

POLG_LANVT

Langat virus (strain TP21)

1Z66; 2GG1

POLG_LIV

Louping ill virus (Li)

6J5C

POLG_LMV0

Lettuce mosaic virus (strain 0 / isolate French) (LMV)

POLG_LMVE

Lettuce mosaic virus (strain E) (LMV)

POLG_LORDV

Lordsdale virus (strain GII/Human/United Kingdom/Lordsdale/1993) (Human enteric calicivirus) (Hu/NV/LD/1993/UK)

POLG_MCFA

Mosquito cell fusing agent (CFA flavivirus)

POLG_MVEV5

Murray valley encephalitis virus (strain MVE-1-51) (MVEV)

2PX2; 2PX4; 2PX5; 2PX8; 2PXA; 2PXC; 2V8O; 2WV9

POLG_OHFV

Omsk hemorrhagic fever virus (OHFV)

POLG_PEMVC

Pepper mottle virus (isolate California) (PeMV) (PepMoV C)

POLG_PEMVM

Peanut mottle virus (strain M)

POLG_PESV

Porcine enteric sapovirus (isolate Swine/United States/Cowden/1980) (Sw/SV/Cowden/1980/US)

2MXD

POLG_PEV9U

Porcine enterovirus 9 (strain UKG/410/73)

6Q69

POLG_POL1S

Poliovirus type 1 (strain Sabin)

POLG_POL2L

Poliovirus type 2 (strain Lansing)

1EAH; 3EPF

POLG_POL2W

Poliovirus type 2 (strain W-2)

POLG_POL32

Poliovirus type 3 (strain 23127)

POLG_POL3L

Poliovirus type 3 (strains P3/Leon/37 and P3/Leon 12A[1]B)

1PIV; 1PVC; 1VBA; 1VBB; 1VBC; 1VBE; 3EPD; 3IYB; 3IYC; 5O5B; 5O5P

POLG_POWVL

Tick-borne powassan virus (strain LB) (POWV) (Powassan virus)

POLG_PPVD

Plum pox potyvirus (strain D) (PPV)

POLG_PPVNA

Plum pox potyvirus (isolate NAT) (PPV)

POLG_PPVRA

Plum pox potyvirus (strain Rankovic) (PPV)

POLG_PPVSK

Plum pox potyvirus (strain SK 68) (PPV)

POLG_PRSVH

Papaya ringspot virus (strain P / mutant HA)

POLG_PSBMV

Pea seed-borne mosaic virus (strain DPD1)

POLG_PVMA

Potato virus A (PVA)

POLG_PVYHU

Potato virus Y (strain Hungarian) (PVY)

POLG_RHDV3

Rabbit hemorrhagic disease virus (strain V-351) (Ra/LV/RHDV/V351/1991/CK) (RHDV-V351)

Genome polyprotein (p254)

POLG_RHDVA

Rabbit hemorrhagic disease virus (strain AST89) (Ra/LV/RHDV/AST89/1989/SP) (RHDV-AST89)

Genome polyprotein (p254)

3ZUE

POLG_RHDVB

Rabbit hemorrhagic disease virus (strain BS89) (Ra/LV/RHDV/BS89/1989/IT) (RHDV-BS89)

Genome polyprotein (p254)

POLG_RHDVS

Rabbit hemorrhagic disease virus (strain SD) (Ra/LV/RHDV/SD/1989/FR) (RHDV-SD)

Genome polyprotein (p254)

POLG_ROCV

Rocio virus (ROCV)

POLG_RTSVT

Rice tungro spherical virus (strain Vt6) (RTSV) (Rice tungro spherical waikavirus)

POLG_SAFV

Saffold virus (SafV) (Human TMEV-like virus-Saffold)

5A8F; 5CFC; 5CFD

POLG_SBMVG

Soybean mosaic virus (strain G2) (SMV)

POLG_SBMVN

Soybean mosaic virus (strain N) (SMV)

POLG_SMSV1

San Miguel sea lion virus serotype 1 (SMSV-1) (SMSV serotype 1)

POLG_SOUV3

Southampton virus (strain GI/Human/United Kingdom/Southampton/1991) (SHV) (Hu/NV/SHV/1991/UK)

2IPH

POLG_SVDVH

Swine vesicular disease virus (strain H/3 '76) (SVDV)

POLG_SVDVU

Swine vesicular disease virus (strain UKG/27/72) (SVDV)

1OOP

POLG_SVM10

Sapporo virus (isolate GII/Human/Thailand/Mc10/2000) (Hu/SaV/Mc10/2000/Thailand)

POLG_TBEVH

Tick-borne encephalitis virus (strain Hypr) (TBEV)

5O6A; 5O6V; 7JNO

POLG_TBEVS

Tick-borne encephalitis virus Far Eastern subtype (strain Sofjin) (SOFV) (Sofjin virus)

1K4R

POLG_TBEVW

Tick-borne encephalitis virus European subtype (strain Neudoerfl) (NEUV) (Neudoerfl virus)

1N6G; 1NA4; 1SVB; 1URZ; 6J5G; 6S8C

POLG_TEV

Tobacco etch virus (TEV)

1LVB; 1LVM; 1Q31; 6SUQ

POLG_TMEVB

Theiler's murine encephalomyelitis virus (strain BeAn 8386) (TMEV)

1TMF

POLG_TMEVD

Theiler's murine encephalomyelitis virus (strain DA) (TMEV)

1TME; 1TMF

POLG_TMEVG

Theiler's murine encephalomyelitis virus (strain GDVII) (TMEV)

POLG_TUMVJ

Turnip mosaic virus (strain Japanese) (TuMV)

3RNV

POLG_TUMVQ

Turnip mosaic virus (strain Quebec) (TuMV)

POLG_TVMV

Tobacco vein mottling virus (TVMV)

3MMG

POLG_USUV

Usutu virus (USUV)

6A0P; 6S92; 6S93; 6S94

POLG_WNV

West Nile virus (WNV)

2FP7; 2G05; 2G2G; 2GGV; 2IJO; 2P5P; 2YOL; 3E90; 3I50; 5IDK

POLG_WNV9

West Nile virus (strain NY-99) (WNV) (West Nile virus (strain NY-1999))

2OY0; 3I50; 3IYW; 3J0B; 3LKZ; 4O6C; 4O6D; 4OIE; 4OII; 6UTE

POLG_WSLV

Wesselsbron virus (WSLV)

POLG_YEFVA

Yellow fever virus (strain Ghana/Asibi/1927) (YFV)

2JQM; 2JV6; 6EPK

POLG_YEFVC

Yellow fever virus (isolate Ivory Coast/1999) (YFV)

POLG_YEFVE

Yellow fever virus (isolate Ethiopia/Couma/1961) (YFV)

POLG_YEFVF

Yellow fever virus (strain French neurotropic vaccine FNV) (YFV)

POLG_YEFVI

Yellow fever virus (isolate Ivory Coast/85-82H/1982) (YFV)

POLG_YEFVN

Yellow fever virus (isolate Angola/14FA/1971) (YFV)

5YXA

POLG_YEFVT

Yellow fever virus (strain Trinidad/TRINID79A/1979) (YFV)

POLG_YEFVU

Yellow fever virus (isolate Uganda/A7094A4/1948) (YFV)

POLG_ZIKVF

Zika virus (isolate ZIKV/Human/French Polynesia/10087PF/2013) (ZIKV)

5GOZ; 5GP1; 5H30; 5H32; 5H37; 5IRE; 5IZ7; 5JMT; 5KQR; 5KQS; 5KVE; 5LBS; 5LBV; 5LCV; 5M5B; 5MRK; 5NJU; 5NJV; 5U4W; 5UHY; 5ULP; 5Y0A; 5Y6M; 5Y6N; 6CO8; 6I7P; 6JFH; 6JFI; 6LD1; 6LD2; 6LD3; 6LD4; 6LD5; 6NIP; 6NIU; 6PLK; 6RWZ; 6S0J; 6UM3; 7BSD; 7BU8; 7BUA

POLG_ZIKVK

Zika virus (isolate ZIKV/Human/Cambodia/FSS13025/2010) (ZIKV)

6UTA

POLG_ZYMVC

Zucchini yellow mosaic virus (strain California) (ZYMV)

POLG_ZYMVR

Zucchini yellow mosaic virus (strain Reunion Island) (ZYMV)

POLG_ZYMVS

Zucchini yellow mosaic virus (strain Singapore) (ZYMV)

48 entries

Polyprotein P1234 (P1234) (Non-structural polyprotein)

POLN_ABPVR

Acute bee paralysis virus (strain Rothamsted) (ABPV) reference strain

Replicase polyprotein (EC 2.7.7.48) (EC 3.4.22.-)

POLN_CHIKS

Chikungunya virus (strain S27-African prototype) (CHIKV) reference strain

3GPG; 3GPO; 3GPQ; 3TRK; 4TU0; 5I22; 6Z0U; 6Z0V

POLN_CRPVC

Cricket paralysis virus (isolate Teleogryllus commodus/Australia/CrPVVIC/1968) (CrPV) reference strain

Replicase polyprotein

6C3R

POLN_HEVCH

Hepatitis E virus genotype 1 (isolate Human/China/HeBei/1987) (HEV) reference strain

Non-structural polyprotein pORF1

POLN_RUBVM

Rubella virus (strain M33) (RUBV) reference strain

Non-structural polyprotein p200 (p200)

POLN_RUBVO

Rubella virus (strain TO-336 vaccine) (RUBV) reference strain

Non-structural polyprotein p200 (p200)

POLN_RUBVT

Rubella virus (strain Therien) (RUBV) reference strain

Non-structural polyprotein p200 (p200)

POLN_SFV

Semliki forest virus (SFV) reference strain

1FW5; 5DRV; 5FW5

POLN_SINDV

Sindbis virus (SINV) reference strain

Polyprotein P1234 (P1234) (Non-structural polyprotein) (p270 nonstructural polyprotein)

4GUA

POLN_AHEV

Avian hepatitis E virus (isolate Chicken/California/Meng) (AHEV)

Non-structural polyprotein pORF1

POLN_AURAV

Aura virus (AURAV)

POLN_BFV

Barmah forest virus (BFV)

POLN_CHIK3

Chikungunya virus (strain 37997) (CHIKV)

6W0T

POLN_DCVEB

Drosophila C virus (strain EB) (DCV)

Replicase polyprotein

POLN_EEEV1

Eastern equine encephalitis virus (strain PE-0.0155) (EEEV) (Eastern equine encephalomyelitis virus)

POLN_EEEV8

Eastern equine encephalitis virus (strain PE-3.0815) (EEEV) (Eastern equine encephalomyelitis virus)

POLN_EEEVF

Eastern equine encephalitis virus (strain Florida 91-469) (EEEV) (Eastern equine encephalomyelitis virus)

POLN_EEVV3

Venezuelan equine encephalitis virus (strain 3880) (VEEV)

POLN_EEVVC

Venezuelan equine encephalitis virus (strain CPA201) (VEEV)

POLN_EEVVM

Venezuelan equine encephalitis virus (strain Mena II) (VEEV)

POLN_EEVVP

Venezuelan equine encephalitis virus (strain P676) (VEEV)

3GQE; 3GQO; 5ISN; 5MQX

POLN_EEVVT

Venezuelan equine encephalitis virus (strain Trinidad donkey) (VEEV)

2HWK; 5EZQ; 5EZS; 6BCM

POLN_EOPV

Ectropis obliqua picorna-like virus (EoPV)

Non-structural polyprotein

POLN_GETV

Getah virus (GETV)

6QZU; 6R0F; 6R0G; 6R0P; 6R0R; 6R0T

POLN_HEVBU

Hepatitis E virus genotype 1 (isolate Human/Burma) (HEV-1)

Non-structural polyprotein pORF1

POLN_HEVCT

Hepatitis E virus genotype 4 (isolate Human/China/T1) (HEV-4) (Hepatitis E virus genotype 4 (isolate Human/China/Ct1))

Non-structural polyprotein pORF1

POLN_HEVHY

Hepatitis E virus genotype 1 (isolate Human/India/Hyderabad) (HEV-1)

Non-structural polyprotein pORF1

POLN_HEVME

Hepatitis E virus genotype 2 (isolate Human/Mexico) (HEV-2)

Non-structural polyprotein pORF1

POLN_HEVMG

Hepatitis E virus genotype 3 (isolate Swine/United States/swUS1) (HEV-3) (Hepatitis E virus genotype 3 (isolate Swine/United States/Meng))

Non-structural polyprotein pORF1

POLN_HEVMY

Hepatitis E virus genotype 1 (isolate Human/Myanmar/HEVNE8L) (HEV-1)

Non-structural polyprotein pORF1

POLN_HEVPA

Hepatitis E virus genotype 1 (isolate Human/Pakistan/Sar-55) (HEV-1)

Non-structural polyprotein pORF1

POLN_HEVUS

Hepatitis E virus genotype 3 (isolate Human/United States/US2) (HEV-3)

Non-structural polyprotein pORF1

POLN_MAYAB

Mayaro virus (strain Brazil) (MAYV)

5IQ5

POLN_ONNVG

O'nyong-nyong virus (strain Gulu) (ONNV)

POLN_ONNVI

O'nyong-nyong virus (strain Igbo Ora) (ONNV) (Igbo Ora virus)

POLN_ONNVS

O'nyong-nyong virus (strain SG650) (ONNV)

POLN_RRVN

Ross river virus (strain NB5092) (RRV)

POLN_RUBVB

Rubella virus (strain BRD1) (RUBV)

Non-structural polyprotein p200 (p200)

POLN_RUBVC

Rubella virus (strain BRDII) (RUBV)

Non-structural polyprotein p200 (p200)

POLN_RUBVD

Rubella virus (strain Cendehill) (RUBV)

Non-structural polyprotein p200 (p200)

POLN_RUBVN

Rubella virus (strain RN-UK86) (RUBV)

Non-structural polyprotein p200 (p200)

POLN_RUBVR

Rubella virus (strain RA27/3 vaccine) (RUBV)

Non-structural polyprotein p200 (p200)

POLN_RUBVV

Rubella virus (strain TO-336) (RUBV)

Non-structural polyprotein p200 (p200)

POLN_SAGV

Sagiyama virus (SAGV)

POLN_SINDO

Sindbis virus subtype Ockelbo (strain Edsbyn 82-5) (OCKV) (Ockelbo virus)

POLN_SLDV

Sleeping disease virus (SDV)

POLN_SPDV

Salmon pancreas disease virus (SPDV)

POLN_WEEV

Western equine encephalitis virus (WEEV)

8 entries

RNA replicase polyprotein (EC 2.7.7.48)

POLR_TYMV

Turnip yellow mosaic virus reference strain

RNA replicase polyprotein (206 kDa polyprotein)

4A5U; 5LW5; 5LWA; 6YPT

POLR_ELV

Erysimum latent virus (ELV)

POLR_EPMV

Eggplant mosaic virus

POLR_KYMVJ

Kennedya yellow mosaic virus (strain Jervis bay) (KYMV)

POLR_NORAV

Nora virus

Replication polyprotein

POLR_OYMV

Ononis yellow mosaic virus

POLR_TYMVA

Turnip yellow mosaic virus (isolate Australia)

POLR_TYMVC

Turnip yellow mosaic virus (isolate TYMC)

36 entries

Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)

R1AB_BC133

Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005) reference strain

R1AB_BC279

Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005) reference strain

R1AB_BC512

Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005) reference strain

R1AB_BCHK4

Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004) reference strain

4YO9; 4YOG; 4YOI; 4YOJ; 6MEA; 6MEB; 6MEN; 6MWM

R1AB_BCHK5

Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004) reference strain

R1AB_BCHK9

Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9) reference strain

5UTV

R1AB_BEV

Berne virus (BEV) reference strain

R1AB_BRV1

Breda virus 1 (BRV-1) reference strain

R1AB_BYVU

Beet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain

Replicase polyprotein 1ab

R1AB_CVH22

Human coronavirus 229E (HCoV-229E) reference strain

1P9S; 2J97; 2J98; 3EJG; 4RS4; 4S1T

R1AB_CVM2

Murine coronavirus (strain 2) (MHV-2) (Murine hepatitis virus) reference strain

R1AB_CVMA5

Murine coronavirus (strain A59) (MHV-A59) (Murine hepatitis virus) reference strain

2GTH; 2GTI; 3VC8; 3VCB; 4YPT; 5WFI; 6JIJ

R1AB_CVPPU

Porcine transmissible gastroenteritis coronavirus (strain Purdue) (TGEV) reference strain

1LVO; 1P9U; 2AMP; 6IVC

R1AB_FIPV

Feline coronavirus (strain FIPV WSU-79/1146) (FCoV) reference strain

3ETI; 3EW5; 3GZF; 3JZT; 3UB0; 4ZRO; 5EU8; 6LP9

R1AB_GLRV3

Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) (Grapevine leafroll-associated closterovirus (isolate 109)) reference strain

Replicase polyprotein 1ab

R1AB_IBVB

Avian infectious bronchitis virus (strain Beaudette) (IBV) reference strain

3EJF; 3EKE; 4X2Z; 5BZ0

R1AB_LIYV9

Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain

Replicase polyprotein 1ab

R1AB_SARS

Severe acute respiratory syndrome coronavirus (SARS-CoV) reference strain

1O5S; 1P76; 1P9T; 1PA5; 1PUK; 1Q1X; 1Q2W; 1QZ8; 1SXF; 1UJ1; 1UK2; 1UK3; 1UK4; 1UW7; 1WOF; 1YSY; 1Z1I; 1Z1J; 2A5A; 2A5I; 2A5K; 2ACF; 2AHM; 2AJ5; 2ALV; 2AMD; 2AMQ; 2BX3; 2BX4; 2C3S; 2D2D; 2DUC; 2FAV; 2FE8; 2FYG; 2G1F; 2G9T; 2GA6; 2GDT; 2GRI; 2GT7; 2GT8; 2GTB; 2GX4; 2GZ7; 2GZ8; 2GZ9; 2H2Z; 2H85; 2HOB; 2HSX; 2IDY; 2JZD; 2JZE; 2JZF; 2K7X; 2K87; 2OP9; 2OZK; 2PWX; 2Q6G; 2QC2; 2QCY; 2QIQ; 2RHB; 2RNK; 2V6N; 2VJ1; 2XYQ; 2XYR; 2XYV; 2Z3C; 2Z3D; 2Z3E; 2Z94; 2Z9G; 2Z9J; 2Z9K; 2Z9L; 3D62; 3E9S; 3EBN; 3R24; 4TWW; 4TWY; 4WY3; 4ZUH; 5B6O; 5C5N; 5C5O; 5C8S; 5C8T; 5C8U; 5E6J; 5F22; 5N19; 5N5O; 5NFY; 6JYT; 6LNQ; 6NUR; 6NUS; 6W79; 6WCO

R1AB_SARS2

Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2) reference strain

5R7Y; 5R7Z; 5R80; 5R81; 5R82; 5R83; 5R84; 5R8T; 5RE4; 5RE5; 5RE6; 5RE7; 5RE8; 5RE9; 5REA; 5REB; 5REC; 5RED; 5REE; 5REF; 5REG; 5REH; 5REI; 5REJ; 5REK; 5REL; 5REM; 5REN; 5REO; 5REP; 5RER; 5RES; 5RET; 5REU; 5REV; 5REW; 5REX; 5REY; 5REZ; 5RF0; 5RF1; 5RF2; 5RF3; 5RF4; 5RF5; 5RF6; 5RF7; 5RF8; 5RF9; 5RFA; 5RFB; 5RFC; 5RFD; 5RFE; 5RFF; 5RFG; 5RFH; 5RFI; 5RFJ; 5RFK; 5RFL; 5RFM; 5RFN; 5RFO; 5RFP; 5RFQ; 5RFR; 5RFS; 5RFT; 5RFU; 5RFV; 5RFW; 5RFX; 5RFY; 5RFZ; 5RG0; 5RG1; 5RG2; 5RG3; 5RGG; 5RGH; 5RGI; 5RGJ; 5RGK; 5RGL; 5RGM; 5RGN; 5RGO; 5RGP; 5RGQ; 5RGR; 5RGS; 5RGT; 5RGU; 5RGV; 5RGW; 5RGX; 5RGY; 5RGZ; 5RH0; 5RH1; 5RH2; 5RH3; 5RH4; 5RH5; 5RH6; 5RH7; 5RH8; 5RH9; 5RHA; 5RHB; 5RHC; 5RHD; 5RHE; 5RHF; 5RL0; 5RL1; 5RL2; 5RL3; 5RL4; 5RL5; 5RL6; 5RL7; 5RL8; 5RL9; 5RLB; 5RLC; 5RLD; 5RLE; 5RLF; 5RLG; 5RLH; 5RLI; 5RLJ; 5RLK; 5RLL; 5RLM; 5RLN; 5RLO; 5RLP; 5RLQ; 5RLR; 5RLS; 5RLT; 5RLU; 5RLV; 5RLW; 5RLY; 5RLZ; 5RM0; 5RM1; 5RM2; 5RM3; 5RM4; 5RM5; 5RM6; 5RM7; 5RM8; 5RM9; 5RMA; 5RMB; 5RMC; 5RMD; 5RME; 5RMF; 5RMG; 5RMH; 5RMI; 5RMJ; 5RMK; 5RML; 5RMM; 5RS7; 5RS8; 5RS9; 5RSB; 5RSC; 5RSD; 5RSE; 5RSF; 5RSG; 5RSH; 5RSI; 5RSJ; 5RSK; 5RSL; 5RSM; 5RSN; 5RSO; 5RSP; 5RSQ; 5RSR; 5RSS; 5RST; 5RSU; 5RSV; 5RSW; 5RSX; 5RSY; 5RSZ; 5RT0; 5RT1; 5RT2; 5RT3; 5RT4; 5RT5; 5RT6; 5RT7; 5RT8; 5RT9; 5RTA; 5RTB; 5RTC; 5RTD; 5RTE; 5RTF; 5RTG; 5RTH; 5RTI; 5RTJ; 5RTK; 5RTL; 5RTM; 5RTN; 5RTO; 5RTP; 5RTQ; 5RTR; 5RTS; 5RTT; 5RTU; 5RTV; 5RTW; 5RTX; 5RTY; 5RTZ; 5RU0; 5RU1; 5RU2; 5RU3; 5RU4; 5RU5; 5RU6; 5RU7; 5RU8; 5RU9; 5RUA; 5RUC; 5RUD; 5RUE; 5RUF; 5RUG; 5RUH; 5RUI; 5RUJ; 5RUK; 5RUL; 5RUM; 5RUN; 5RUO; 5RUP; 5RUQ; 5RUR; 5RUS; 5RUT; 5RUU; 5RUV; 5RUW; 5RUX; 5RUY; 5RUZ; 5RV0; 5RV1; 5RV2; 5RV3; 5RV4; 5RV5; 5RV6; 5RV7; 5RV8; 5RV9; 5RVA; 5RVB; 5RVC; 5RVD; 5RVE; 5RVF; 5RVG; 5RVH; 5RVI; 5RVJ; 5RVK; 5RVL; 5RVM; 5RVN; 5RVO; 5RVP; 5RVQ; 5RVR; 5RVS; 5RVT; 5RVU; 5RVV; 5S18; 5S1A; 5S1C; 5S1E; 5S1G; 5S1I; 5S1K; 5S1M; 5S1O; 5S1Q; 5S1S; 5S1U; 5S1W; 5S1Y; 5S20; 5S22; 5S24; 5S26; 5S27; 5S28; 5S29; 5S2A; 5S2B; 5S2C; 5S2D; 5S2E; 5S2F; 5S2G; 5S2H; 5S2I; 5S2J; 5S2K; 5S2L; 5S2M; 5S2N; 5S2O; 5S2P; 5S2Q; 5S2R; 5S2S; 5S2T; 5S2U; 5S2V; 5S2W; 5S2X; 5S2Y; 5S2Z; 5S30; 5S31; 5S32; 5S33; 5S34; 5S35; 5S36; 5S37; 5S38; 5S39; 5S3A; 5S3B; 5S3C; 5S3D; 5S3E; 5S3F; 5S3G; 5S3H; 5S3I; 5S3J; 5S3K; 5S3L; 5S3M; 5S3N; 5S3O; 5S3P; 5S3Q; 5S3R; 5S3S; 5S3T; 5S3U; 5S3V; 5S3W; 5S3X; 5S3Y; 5S3Z; 5S40; 5S41; 5S42; 5S43; 5S44; 5S45; 5S46; 5S47; 5S48; 5S49; 5S4A; 5S4B; 5S4C; 5S4D; 5S4E; 5S4F; 5S4G; 5S4H; 5S4I; 5S4J; 5S4K; 5S6X; 5S6Y; 5S6Z; 5S70; 5S71; 5S72; 5S73; 5S74; 6LU7; 6LZE; 6M03; 6M0K; 6M2N; 6M2Q; 6M71; 6VWW; 6VXS; 6W01; 6W02; 6W4B; 6W4H; 6W61; 6W63; 6W6Y; 6W75; 6W9C; 6W9Q; 6WC1; 6WCF; 6WEN; 6WEY; 6WIQ; 6WJT; 6WKQ; 6WKS; 6WLC; 6WNP; 6WOJ; 6WQ3; 6WQD; 6WQF; 6WRH; 6WRZ; 6WTC; 6WTJ; 6WTK; 6WTM; 6WTT; 6WUU; 6WVN; 6WX4; 6WXC; 6WXD; 6WZU; 6X1B; 6X4I; 6XA4; 6XA9; 6XAA; 6XB0; 6XB1; 6XB2; 6XBG; 6XBH; 6XBI; 6XCH; 6XDH; 6XFN; 6XG3; 6XHM; 6XHU; 6XIP; 6XKF; 6XKH; 6XKM; 6XMK; 6XOA; 6XQS; 6XQT; 6XQU; 6XR3; 6Y2E; 6Y2F; 6Y2G; 6Y84; 6YB7; 6YNQ; 6YVA; 6YVF; 6YWK; 6YWL; 6YWM; 6YYT; 6YZ1; 6Z2E; 6Z5T; 6Z6I; 6Z72; 6ZCT; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 6ZPE; 6ZRT; 6ZRU; 6ZSL; 7A1U; 7ABU; 7ADW; 7AF0; 7AGA; 7AHA; 7AK4; 7AKU; 7ALH; 7ALI; 7AMJ; 7ANS; 7AP6; 7APH; 7AQE; 7AQI; 7AQJ; 7AR5; 7AR6; 7ARF; 7AVD; 7AWR; 7AWS; 7AWU; 7AWW; 7AX6; 7AXM; 7AXO; 7AY7; 7B3E; 7B83; 7BB2; 7BE7; 7BF3; 7BF4; 7BF5; 7BF6; 7BFB; 7BGP; 7BQ7; 7BQY; 7BRO; 7BRP; 7BTF; 7BUY; 7BV1; 7BV2; 7BZF; 7C2I; 7C2J; 7C2K; 7C2Q; 7C2Y; 7C6S; 7C6U; 7C7P; 7C8B; 7C8R; 7C8T; 7C8U; 7CBT; 7CJD; 7CJM; 7CMD; 7COM; 7CWB; 7CWC; 7CX9; 7D1M; 7D1O; 7JFQ; 7JHE; 7JIB; 7JKV; 7JME; 7JOY; 7JP1; 7JPE; 7JPY; 7JPZ; 7JQ0; 7JQ1; 7JQ2; 7JQ3; 7JQ4; 7JQ5; 7JQB; 7JQC; 7JR3; 7JR4; 7JST; 7JU7; 7JUN; 7JVZ; 7JYC; 7JYY; 7JZ0; 7K0F; 7K1L; 7K1O; 7K3N; 7K3T; 7K40; 7K5I; 7K6D; 7K6E; 7K7P; 7K9P; 7KAG; 7KEG; 7KEH; 7KF4; 7KFI; 7KG3; 7KHP; 7KOA; 7KPH; 7KQO; 7KQP; 7KQW; 7KR0; 7KR1; 7KVL; 7KVR; 7KX5; 7KXB; 7KYU; 7L0D; 7L10; 7L11; 7L12; 7L13; 7L14; 7L1F; 7L5D; 7L6R; 7L6T; 7LB7; 7LBN; 7LBR; 7LBS; 7LDX; 7LFE; 7LFP; 7LFZ; 7LG2; 7LG3; 7LG7; 7LGO; 7LKR; 7LKS; 7LKT; 7LKU; 7LKV; 7LKW; 7LKX; 7LLF; 7LLZ; 7LOS; 7LTJ; 7NBR; 7NBS; 7NBY; 7NEV; 7NFV

R1AB_WBV24

White bream virus (isolate Blicca bjoerkna L./Germany/DF24/00) (WBV) reference strain

R1AB_BCHK3

Bat coronavirus HKU3 (BtCoV) (SARS-like coronavirus HKU3)

R1AB_BCRP3

Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like coronavirus Rp3)

R1AB_CVBEN

Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT) (BCV)

R1AB_CVBLU

Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN) (BCV)

R1AB_CVBM

Bovine coronavirus (strain Mebus) (BCoV) (BCV)

R1AB_CVBQ

Bovine coronavirus (strain Quebec) (BCoV) (BCV)

R1AB_CVHN1

Human coronavirus HKU1 (isolate N1) (HCoV-HKU1)

R1AB_CVHN2

Human coronavirus HKU1 (isolate N2) (HCoV-HKU1)

R1AB_CVHN5

Human coronavirus HKU1 (isolate N5) (HCoV-HKU1)

R1AB_CVHNL

Human coronavirus NL63 (HCoV-NL63)

5NH0; 6FV1; 6FV2

R1AB_CVHOC

Human coronavirus OC43 (HCoV-OC43)

R1AB_CVMJH

Murine coronavirus (strain JHM) (MHV-JHM) (Murine hepatitis virus)

R1AB_IBVBC

Avian infectious bronchitis virus (strain Beaudette CK) (IBV)

R1AB_IBVM

Avian infectious bronchitis virus (strain M41) (IBV)

2Q6D; 2Q6F; 5C94

R1AB_MERS1

Middle East respiratory syndrome-related coronavirus (isolate United Kingdom/H123990006/2012) (MERS-CoV) (Betacoronavirus England 1)

4WUR; 5HOL; 5KO3

R1AB_PEDV7

Porcine epidemic diarrhea virus (strain CV777) (PEDV)

5HIY; 5HIZ

293 entries

RNA-directed RNA polymerase catalytic subunit (EC 2.7.7.48) (Polymerase basic protein 1) (PB1) (RNA-directed RNA polymerase subunit P1)

RDRP_ACLSA

Apple chlorotic leaf spot virus (isolate apple) (ACLSV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)

RDRP_ACLSP

Apple chlorotic leaf spot virus (isolate plum P863) (ACLSV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (216.5 kDa protein) (ORF1 protein) (RNA replicase)

RDRP_AHV2H

Atkinsonella hypoxylon virus (isolate 2H) (AhV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_AMVLE

Alfalfa mosaic virus (strain 425 / isolate Leiden) reference strain

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_APRVF

Aedes pseudoscutellaris reovirus (isolate France) (ApRV) reference strain

RNA-directed RNA polymerase VP2 (EC 2.7.7.48)

RDRP_AQRVC

Aquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain

RNA-directed RNA polymerase VP2 (EC 2.7.7.48)

RDRP_AQRVG

Aquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain

RNA-directed RNA polymerase VP2 (EC 2.7.7.48)

RDRP_ASPVP

Apple stem pitting virus (isolate PA66) (ASPV) reference strain

RNA replication polyprotein (ORF1 protein)

RDRP_BAVJK

Banna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

RNA-directed RNA polymerase VP1 (EC 2.7.7.48) (Virion protein 1) (VP1)

RDRP_BBMV

Broad bean mottle virus reference strain

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_BBSCV

Blueberry scorch virus (BBScV) reference strain

RNA replication polyprotein (223 kDa protein) (ORF1 protein)

RDRP_BMV

Brome mosaic virus (BMV) reference strain

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_BNYVS

Beet necrotic yellow vein virus (isolate Japan/S) (BNYVV) reference strain

Replicase (237 kDa protein)

RDRP_BOTVF

Botrytis virus F (isolate Botrytis cinerea/New Zealand/Howitt/2001) (BotV-F) reference strain

RNA replication protein

RDRP_BOTVX

Botrytis virus X (isolate Botrytis cinerea/New Zealand/Howitt/2006) (BOTV-X) reference strain

RNA replication protein

RDRP_BPGA

Enterobacteria phage GA (Bacteriophage GA) reference strain

RNA-directed RNA polymerase beta chain (EC 2.7.7.48) (RNA replicase beta chain)

RDRP_BPMS2

Escherichia phage MS2 (Bacteriophage MS2) reference strain

RNA-directed RNA polymerase beta chain (EC 2.7.7.48) (RNA replicase beta chain)

RDRP_BPMX1

Escherichia phage Qbeta reference strain

RNA-directed RNA polymerase subunit beta (EC 2.7.7.48) (RNA replicase beta chain)

RDRP_BPPH6

Pseudomonas phage phi6 (Bacteriophage phi-6) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein P2)

1HHS; 1HHT; 1HI0; 1HI1; 1HI8; 1UVI; 1UVJ; 1UVK; 1UVL; 1UVM; 1UVN; 1WAC; 2JL9; 2JLF; 2JLG; 4A8F; 4A8K; 4A8M; 4A8O; 4A8Q; 4A8S; 4A8W; 4A8Y; 4B02; 5FJ6; 5FJ7

RDRP_BPQBE

Escherichia virus Qbeta (Bacteriophage Q-beta) reference strain

RNA-directed RNA polymerase subunit beta (EC 2.7.7.48) (RNA replicase beta chain) (RNA-directed RNA polymerase subunit II)

3AGP; 3AGQ; 3AVT; 3AVU; 3AVV; 3AVW; 3AVX; 3AVY; 3MMP; 3VNU; 3VNV; 4FWT; 4Q7J; 4R71

RDRP_BPSP

Enterobacteria phage SP (Bacteriophage SP) reference strain

RNA-directed RNA polymerase subunit beta (EC 2.7.7.48) (RNA replicase beta chain)

RDRP_BSMV

Barley stripe mosaic virus (BSMV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Gamma-A protein)

RDRP_BSNV

Blotched snakehead virus (BSNV) (Channa lucius virus) reference strain

RNA-directed RNA polymerase (RDRP) (EC 2.7.7.48) (Protein VP1)

RDRP_BTV10

Bluetongue virus 10 (isolate USA) (BTV 10) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (VP1)

RDRP_BYDV1

Barley yellow dwarf virus (isolate MAV-PS1) (BYDV) reference strain

Putative RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_BYDVP

Barley yellow dwarf virus (isolate PAV) (BYDV) reference strain

Putative RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_CARMS

Carnation mottle virus (isolate China/Shanghai) (CarMV) reference strain

Probable RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)

RDRP_CARMV

Carnation mottle virus (CarMV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)

RDRP_CFMVN

Cocksfoot mottle virus (isolate Dactylis glomerata/Norway/CfMV-NO/1995) (CfMV) reference strain

Replicase polyprotein P2AB

RDRP_CGMVS

Cucumber green mottle mosaic virus (strain watermelon SH) (CGMMV) reference strain

Replicase large subunit (EC 2.7.7.48) (186 kDa protein)

RDRP_CLBVS

Citrus leaf blotch virus (isolate Nagami kumquat/France/SRA-153/1984) (CLBV) reference strain

RNA replication polyprotein (ORF1 protein)

RDRP_CMVFN

Cucumber mosaic virus (strain FNY) (CMV) reference strain

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CMVQ

Cucumber mosaic virus (strain Q) (CMV) reference strain

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CNV

Cucumber necrosis virus (CNV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p92)

RDRP_CPMV1

Cryphonectria parasitica mitovirus 1 (strain American chestnut tree/New Jersey/NB631) (CMV1) (Cryphonectria mitovirus 1) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (p93)

RDRP_CPVKS

Cryptosporidium parvum virus 1 (strain KSU-1) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_CRSVL

Carnation ringspot virus (isolate Lommel) (CRSV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)

RDRP_CTFVL

Colorado tick fever virus (strain USA/Florio N-7180) (CTFV) reference strain

RNA-directed RNA polymerase VP1 (EC 2.7.7.48)

RDRP_DXV96

Drosophila x virus (isolate Chung/1996) (DXV) reference strain

RNA-directed RNA polymerase (RDRP) (EC 2.7.7.48) (Protein VP1)

RDRP_FDVS

Fiji disease virus (isolate Sugarcane) (FDV) reference strain

RNA-directed RNA polymerase VP1 (EC 2.7.7.48)

RDRP_FXMV

Foxtail mosaic virus reference strain

RNA replication protein (152 kDa protein) (ORF1 protein)

RDRP_GFKVM

Grapevine fleck virus (isolate Italy/MT48) (GFkV) reference strain

RNA replication protein

RDRP_GLVWB

Giardia lamblia virus (isolate Wang) (GLV) reference strain

Probable RNA-directed RNA polymerase (EC 2.7.7.48) (Gag-Pol protein)

RDRP_GRVMC

Groundnut rosette virus (strain MC1) (GRV) reference strain

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48)

RDRP_GVAIS

Grapevine virus A (isolate Is 151) (GVA) reference strain

RNA replication protein

RDRP_HASV

Helicoverpa armigera stunt virus (HaSV) reference strain

Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)

RDRP_HPBVH

Human picobirnavirus (strain Human/Thailand/Hy005102/-) (PBV) reference strain

Potential RNA-dependent RNA polymerase (EC 2.7.7.48)

5I61; 5I62

RDRP_HV19S

Helminthosporium victoriae virus-190S (Hv190SV) reference strain

Probable RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_I34A1

Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) reference strain

2ZNL; 2ZTT; 3A1G

RDRP_I80A6

Influenza A virus (strain A/Duck/Hokkaido/8/1980 H3N8) reference strain

RDRP_I80A8

Influenza A virus (strain A/Turkey/Minnesota/833/1980 H4N2) reference strain

RDRP_I80AD

Influenza A virus (strain A/Gull/Minnesota/945/1980 H13N6) reference strain

RDRP_I96A0

Influenza A virus (strain A/Goose/Guangdong/1/1996 H5N1 genotype Gs/Gd) reference strain

3J9B

RDRP_IBDVB

Avian infectious bursal disease virus (strain Chicken/Cuba/Soroa/1998) (IBDV) (Gumboro disease virus) reference strain

RNA-directed RNA polymerase (RDRP) (EC 2.7.7.48) (Protein VP1)

RDRP_IBDVU

Avian infectious bursal disease virus (isolate Chicken/UK/UK661/1989) (IBDV) (Gumboro disease virus) reference strain

RNA-directed RNA polymerase (RDRP) (EC 2.7.7.48) (Protein VP1)

RDRP_ICRSV

Indian citrus ringspot virus (isolate Kinnow mandarin/India/K1/1996) (ICRSV) reference strain

RNA replication protein

RDRP_INBLE

Influenza B virus (strain B/Lee/1940) reference strain

RDRP_INCAA

Influenza C virus (strain C/Ann Arbor/1/1950) reference strain

RDRP_IPNVJ

Infectious pancreatic necrosis virus (strain Jasper) (IPNV) reference strain

RNA-directed RNA polymerase (RDRP) (EC 2.7.7.48) (Protein VP1)

2YI8; 2YI9; 2YIA; 2YIB; 3ZED

RDRP_IPNVS

Infectious pancreatic necrosis virus (strain Sp) (IPNV) reference strain

RNA-directed RNA polymerase (RDRP) (EC 2.7.7.48) (Protein VP1)

RDRP_ISAV8

Infectious salmon anemia virus (isolate Atlantic salmon/Norway/810/9/99) (ISAV) reference strain

RNA-directed RNA polymerase catalytic subunit (EC 2.7.7.48) (Polymerase basic protein 1) (PB1) (Protein 1) (P1) (RNA-directed RNA polymerase subunit P1)

RDRP_LDCPR

Lymantria dispar cypovirus 1 (isolate Rao) (LdCPV-1) reference strain

RNA-directed RNA polymerase VP2 (EC 2.7.7.48)

RDRP_LOLV

Lolium latent virus (isolate Lolium/USA/US1/-) (LoLV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_LRVLG

Leishmania RNA virus 1 - 1 (isolate Leishmania guyanensis) (LRV-1-1) reference strain

Probable RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_MBVLF

Mushroom bacilliform virus (isolate Australia/AUS LF-1) (MBV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_MCMVK

Maize chlorotic mottle virus (isolate United States/Kansas/1987) (MCMV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (111 kDa protein) (Protein p111)

RDRP_MPRVN

Micromonas pusilla reovirus (isolate Netherlands/2005) (MpRV) reference strain

RNA-directed RNA polymerase VP2 (EC 2.7.7.48)

RDRP_MYRV9

Cryphonectria parasitica mycoreovirus 1 (strain 9B21) (CpMYRV-1) reference strain

RNA-directed RNA polymerase VP1 (EC 2.7.7.48)

RDRP_NCBVS

Nudaurelia capensis beta virus (isolate Pine emperor moth/South Africa) (NbetaV) reference strain

Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)

RDRP_NMV

Narcissus mosaic virus (NMV) reference strain

RNA replication protein (186 kDa protein) (ORF1 protein)

RDRP_NODAM

Nodamura virus (strain Mag115) (NoV) reference strain

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)

RDRP_OCSVU

Oat chlorotic stunt virus (isolate United Kingdom) (OCSV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p84)

RDRP_OLV2I

Olive latent virus 2 (isolate Italy) (OLV-2) reference strain

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_ORSVS

Odontoglossum ringspot virus (isolate Singapore 1) (ORSV) reference strain

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_OUMVV

Ourmia melon virus (isolate Melon/Iran/VE9) (OuMV) reference strain

RNA-dependent RNA polymerase (EC 2.7.7.48)

RDRP_P1AMV

Plantago asiatica mosaic potexvirus (P1AMV) reference strain

RNA replication protein (156 kDa protein) (ORF1 protein)

RDRP_PCV87

Peanut clump virus (isolate 87/TGTA2) (PCV) reference strain

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (RNA-directed RNA polymerase)

RDRP_PCVC

Penicillium chrysogenum virus (isolate Caston/2003) (PcV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_PEMVW

Pea enation mosaic virus-1 (strain WSG) (PEMV-1) reference strain

Protein P1-P2

RDRP_PLRV1

Potato leafroll virus (strain Potato/Scotland/strain 1/1984) (PLrV) reference strain

Protein P1-P2

RDRP_PMTVS

Potato mop-top virus (isolate Potato/Sweden/Sw) (PMTV) reference strain

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (RNA-directed RNA polymerase)

RDRP_PMV

Papaya mosaic potexvirus (PMV) reference strain

RNA replication protein (176 kDa protein) (ORF1 protein)

RDRP_PMVK

Panicum mosaic virus (strain United States/Kansas 109S) (PMV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p112)

RDRP_PNLV

Poinsettia latent virus (isolate Euphorbia pulcherrima/Germany/Siepen/2005) (PnLV) (Poinsettia cryptic virus) reference strain

Protein P2-P3

RDRP_POLVP

Pothos latent virus (isolate Pigeonpea/India) (PoLV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p84)

RDRP_PVMR

Potato virus M (strain Russian) (PVM) reference strain

RNA replication polyprotein (ORF1 protein)

RDRP_PVXX3

Potato virus X (strain X3) (PVX) reference strain

RNA replication protein (165 kDa protein) (ORF1 protein)

RDRP_PZSVT

Pelargonium zonate spot virus (isolate Tomato/Italy/1982) (PZSV) (Pelargonium zonate spot virus (isolate Tomato)) reference strain

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_QRFVE

Quaranfil virus (isolate QrfV/Tick/Afghanistan/EG_T_377/1968) (QRFV) reference strain

RNA-directed RNA polymerase catalytic subunit (EC 2.7.7.48)

RDRP_RBDVR

Raspberry bushy dwarf virus (isolate Malling Jewel raspberry/R15) (RBDV) reference strain

Methyltransferase/helicase/RNA-directed RNA polymerase (EC 2.1.1.-) (EC 2.7.7.48) (EC 3.6.4.13)

RDRP_RCNMV

Red clover necrotic mosaic virus (RCNMV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)

RDRP_RDVF

Rice dwarf virus (isolate Fujian) (RDV) reference strain

RNA-directed RNA polymerase P1 (EC 2.7.7.48) (Replicase)

RDRP_REOVD

Reovirus type 3 (strain Dearing) (T3D) (Mammalian orthoreovirus 3) reference strain

RNA-directed RNA polymerase lambda-3 (Lambda3) (EC 2.7.7.48) (Lambda3(Pol))

1MUK; 1MWH; 1N1H; 1N35; 1N38; 1UON

RDRP_REOVL

Reovirus type 1 (strain Lang) (T1L) (Mammalian orthoreovirus 1) reference strain

RNA-directed RNA polymerase lambda-3 (Lambda3) (EC 2.7.7.48) (Lambda3(Pol))

2CSE

RDRP_RGDV

Rice gall dwarf virus (RGDV) reference strain

RNA-directed RNA polymerase P1 (EC 2.7.7.48) (Replicase)

RDRP_ROTB2

Rotavirus X (isolate RVX/Human/Bangladesh/NADRV-B219/2002/GXP[X]) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-B219)) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTBU

Rotavirus A (strain RVA/Cow/United Kingdom/UK/1975/G6P7[5]) (RV-A) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTH7

Rotavirus A (isolate RVA/Human/United Kingdom/A64/1987/G10P11[14]) (RV-A) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTHC

Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989) (RV-C) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTJ1

Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-J19)) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTS1

Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A) (Simian Agent 11 (strain Both)) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTSH

Rotavirus A (isolate RVA/Monkey/South Africa/SA11-H96/1958/G3P5B[2]) (RV-A) (Simian Agent 11 (isolate SI/South Africa/H96/58)) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_RRSVT

Rice ragged stunt virus (isolate Thailand) (RRSV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_RSVT

Rice stripe virus (isolate T) (RSV) reference strain

RNA-dependent RNA polymerase (EC 2.7.7.48) (Replicase) (Transcriptase)

RDRP_SBMVA

Southern bean mosaic virus (isolate Bean/United States/Arkansas) (SBMV) reference strain

Replicase polyprotein P2AB

RDRP_SBWMN

Soil-borne wheat mosaic virus (strain United States/Nebraska/1981) (SBWMV) reference strain

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (209 kDa readthrough protein) (RNA-directed RNA polymerase)

RDRP_SCPMV

Southern cowpea mosaic virus (SCPMV) (Southern bean mosaic virus (strain cowpea)) reference strain

Replicase polyprotein P2AB

RDRP_SCV20

Saccharomyces 20S RNA narnavirus (ScNV-20S) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (p91)

RDRP_SCVLA

Saccharomyces cerevisiae virus L-A (ScV-L-A) (ScVL1) reference strain

Probable RNA-directed RNA polymerase (EC 2.7.7.48) (Gag-Pol protein)

RDRP_SCVLB

Saccharomyces cerevisiae virus L-BC (ScV-L-BC) (ScVLa) reference strain

Probable RNA-directed RNA polymerase (EC 2.7.7.48) (Gag-Pol protein)

RDRP_SHMV

Sunn-hemp mosaic virus (SHMV) (TMV strain cowpea) reference strain

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_SHVX

Shallot virus X (ShVX) reference strain

RNA replication protein (194 kDa protein)

RDRP_SJNNV

Striped jack nervous necrosis virus (SjNNV) reference strain

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)

RDRP_SMYEA

Strawberry mild yellow edge-associated virus (SMYEaV) reference strain

RNA replication protein (150 kDa protein) (ORF1 protein)

RDRP_SSDRV

Sclerotinia sclerotiorum debilitation-associated virus (isolate Sclerotinia/China/Xie/-) (SsDRV) reference strain

RNA replication protein

RDRP_TAV

Tomato aspermy virus (TAV) reference strain

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_TBSVC

Tomato bushy stunt virus (strain Cherry) (TBSV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p92)

RDRP_TCV

Turnip crinkle virus (TCV) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)

RDRP_THOGV

Thogoto virus (isolate SiAr 126) (Tho) reference strain

RNA-directed RNA polymerase catalytic subunit (EC 2.7.7.48) (RNA-directed RNA polymerase subunit P2)

RDRP_TMV

Tobacco mosaic virus (strain vulgare) (TMV) (Tobacco mosaic virus (strain U1)) reference strain

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TMVOM

Tobacco mosaic virus (strain OM) (TMV) reference strain

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TNVA

Tobacco necrosis virus (strain A) (TNV-A) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p82)

RDRP_TOBSV

Tobacco streak virus (strain WC) (TSV) reference strain

RNA-directed RNA polymerase 2a (2a pol) (EC 2.7.7.48) (2a polymerase)

RDRP_TRVPP

Tobacco rattle virus (isolate PpK20) (TRV) reference strain

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (194 kDa protein) (RNA-directed RNA polymerase)

RDRP_TVCV

Turnip vein-clearing virus (TVCV) reference strain

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TYYVF

Turnip yellows virus (isolate FL-1) (TuYV) (BWYV-FL1) reference strain

Protein P1-P2

RDRP_WCCVB

White clover cryptic virus 1 (isolate Boccardo/2004) (WCCV-1) reference strain

RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_WCMVM

White clover mosaic virus (strain M) (WCMV) reference strain

RNA replication protein (147 kDa protein) (ORF1 protein)

RDRP_WCMVO

White clover mosaic virus (strain O) (WCMV) reference strain

RNA replication protein (147 kDa protein) (ORF1 protein)

RDRP_YOMV

Youcai mosaic virus (YoMV) reference strain

Replicase large subunit (EC 2.7.7.48) (182 kDa protein)

RDRP_AHNNV

Atlantic halibut nervous necrosis virus (AhNNV)

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)

RDRP_AHSV9

African horse sickness virus 9 (AHSV-9)

RNA-directed RNA polymerase (EC 2.7.7.48) (VP1)

RDRP_AQRVA

Aquareovirus A (isolate Chum salmon/Japan/CSRV/1981) (AQRV-A)

RNA-directed RNA polymerase VP2 (EC 2.7.7.48)

RDRP_BBV

Black beetle virus (BBV)

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)

RDRP_BOOLV

Boolarra virus (BoV)

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)

RDRP_BPFR

Enterobacteria phage fr (Bacteriophage fr)

RNA-directed RNA polymerase beta chain (EC 2.7.7.48) (RNA replicase beta chain)

RDRP_BYDVR

Barley yellow dwarf virus (isolate P-PAV) (BYDV)

Putative RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_CCMV

Cowpea chlorotic mottle virus (CCMV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CMVAS

Cucumber mosaic virus (strain As) (CMV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CMVB

Cucumber mosaic virus (strain B) (CMV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CMVII

Cucumber mosaic virus (strain Iizuka) (CMV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CMVIX

Cucumber mosaic virus (strain Ixora) (CMV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CMVK

Cucumber mosaic virus (strain K) (CMV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CMVKO

Cucumber mosaic virus (strain Kor) (CMV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CMVMB

Cucumber mosaic virus (strain MB-8) (CMV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CMVNT

Cucumber mosaic virus (strain NT9) (CMV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CMVY

Cucumber mosaic virus (strain Y) (CMV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_CRV

Cymbidium ringspot virus (CymRSV)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p92)

RDRP_DHVI1

Dhori virus (strain Indian/1313/61) (Dho)

RNA-directed RNA polymerase catalytic subunit (EC 2.7.7.48) (RNA-directed RNA polymerase subunit P2)

RDRP_ESRV9

Eriocheir sinensis reovirus (isolate China/905) (EsRV)

RNA-directed RNA polymerase (EC 2.7.7.48)

RDRP_FHV

Flock house virus (FHV)

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)

RDRP_GGNNV

Greasy grouper nervous necrosis virus (GGNNV) (Epinephelus tauvina nervous necrosis virus)

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)

RDRP_I000X

Influenza A virus (strain A/X-31 H3N2)

RDRP_I00A0

Influenza A virus (strain A/Duck/Hong Kong/2986.1/2000 H5N1 genotype C)

RDRP_I00A1

Influenza A virus (strain A/New Zealand:South Canterbury/35/2000 H1N1)

RDRP_I01A0

Influenza A virus (strain A/Silky Chicken/Hong Kong/SF189/2001 H5N1 genotype A)

RDRP_I01A3

Influenza A virus (strain A/Chicken/Hong Kong/715.5/2001 H5N1 genotype E)

RDRP_I02A2

Influenza A virus (strain A/Chicken/Hong Kong/31.2/2002 H5N1 genotype X1)

RDRP_I02A3

Influenza A virus (strain A/Chicken/Hong Kong/37.4/2002 H5N1 genotype X2)

RDRP_I02A4

Influenza A virus (strain A/Silky Chicken/Hong Kong/YU100/2002 H5N1 genotype X3)

RDRP_I02A6

Influenza A virus (strain A/Chicken/Hong Kong/YU22/2002 H5N1 genotype Z)

RDRP_I02A7

Influenza A virus (strain A/Teal/China/2978.1/2002 H5N1 genotype W)

RDRP_I03A0

Influenza A virus (strain A/Hong Kong/212/2003 H5N1 genotype Z+)

RDRP_I03A1

Influenza A virus (strain A/Chicken/Shantou/4231/2003 H5N1 genotype V)

RDRP_I05A1

Influenza A virus (strain A/Goose/Guangxi/345/2005 H5N1 genotype G)

RDRP_I06A0

Influenza A virus (strain A/Russia:St.Petersburg/8/2006 H1N1)

RDRP_I07A0

Influenza A virus (strain A/USA:Texas/UR06-0195/2007 H1N1)

RDRP_I18A0

Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) (Influenza A virus (strain A/South Carolina/1/1918 H1N1))

RDRP_I33A0

Influenza A virus (strain A/Wilson-Smith/1933 H1N1) (Influenza A virus (strain A/WS/1933 H1N1))

RDRP_I35A3

Influenza A virus (strain A/USA:Phila/1935 H1N1)

RDRP_I36A0

Influenza A virus (strain A/Henry/1936 H1N1)

RDRP_I40A0

Influenza A virus (strain A/Hickox/1940 H1N1)

RDRP_I43A0

Influenza A virus (strain A/USA:Iowa/1943 H1N1)

RDRP_I45A0

Influenza A virus (strain A/USA:Huston/AA/1945 H1N1)

RDRP_I47A0

Influenza A virus (strain A/Fort Monmouth/1/1947 H1N1)

RDRP_I49A1

Influenza A virus (strain A/Duck/Germany/1949 H10N7)

RDRP_I51A0

Influenza A virus (strain A/USA:Albany/12/1951 H1N1)

RDRP_I54A2

Influenza A virus (strain A/Malaysia:Malaya/302/1954 H1N1)

RDRP_I56A0

Influenza A virus (strain A/Beijing/11/1956 H1N1)

RDRP_I56A1

Influenza A virus (strain A/Duck/Czechoslovakia/1956 H4N6)

RDRP_I56A2

Influenza A virus (strain A/Duck/England/1/1956 H11N6)

RDRP_I57A0

Influenza A virus (strain A/Japan/305/1957 H2N2)

RDRP_I57A1

Influenza A virus (strain A/Leningrad/134/1957 H2N2)

RDRP_I57A2

Influenza A virus (strain A/Leningrad/134/17/1957 H2N2)

RDRP_I57A3

Influenza A virus (strain A/Leningrad/134/47/1957 H2N2)

RDRP_I57A5

Influenza A virus (strain A/Singapore/1/1957 H2N2)

RDRP_I59A0

Influenza A virus (strain A/Chicken/Scotland/1959 H5N1)

RDRP_I60A0

Influenza A virus (strain A/Ann Arbor/6/1960 H2N2)

RDRP_I61A1

Influenza A virus (strain A/Swine/Wisconsin/1/1961 H1N1)

RDRP_I66A0

Influenza A virus (strain A/Turkey/Ontario/7732/1966 H5N9)

RDRP_I66A1

Influenza A virus (strain A/Turkey/Wisconsin/1/1966 H9N2)

RDRP_I67A0

Influenza A virus (strain A/Tokyo/3/1967 H2N2)

RDRP_I67A2

Influenza A virus (strain A/Swine/Wisconsin/1/1967 H1N1)

RDRP_I68A3

Influenza A virus (strain A/Turkey/Ontario/6118/1968 H8N4)

RDRP_I68A4

Influenza A virus (strain A/Hong Kong/1/1968 H3N2)

6QX3

RDRP_I68A5

Influenza A virus (strain A/Korea/426/1968 H2N2)

RDRP_I68A6

Influenza A virus (strain A/Northern Territory/60/1968 H3N2) (Influenza A virus (strain NT60)) (Influenza A virus (strain A/NT/60/1968 H3N2))

6QNW; 6QPG; 6QX8; 6QXE; 6RR7

RDRP_I69A0

Influenza A virus (strain A/England/878/1969 H3N2)

RDRP_I70A0

Influenza A virus (strain A/Qu/7/1970 H3N2)

RDRP_I71A1

Influenza A virus (strain A/Memphis/1/1971 H3N2)

RDRP_I72A2

Influenza A virus (strain A/Udorn/307/1972 H3N2)

RDRP_I72A3

Influenza A virus (strain A/Memphis/102/1972 H3N2)

RDRP_I72A4

Influenza A virus (strain A/Memphis/101/1972 H3N2)

RDRP_I73A4

Influenza A virus (strain A/Equine/London/1416/1973 H7N7)

RDRP_I73A5

Influenza A virus (strain A/Port Chalmers/1/1973 H3N2)

RDRP_I73A6

Influenza A virus (strain A/Dunedin/4/1973 H3N2)

RDRP_I75A0

Influenza A virus (strain A/Beijing/39/1975 H3N2)

RDRP_I75A3

Influenza A virus (strain A/Victoria/3/1975 H3N2)

RDRP_I76A6

Influenza A virus (strain A/Memphis/110/1976 H3N2)

RDRP_I77A4

Influenza A virus (strain A/Swine/Colorado/1/1977 H3N2)

RDRP_I77AA

Influenza A virus (strain A/Brazil/11/1978 H1N1)

RDRP_I77AB

Influenza A virus (strain A/USSR/90/1977 H1N1)

RDRP_I77AD

Influenza A virus (strain A/Swine/Tennessee/26/1977 H1N1)

RDRP_I77AF

Influenza A virus (strain A/Gull/Maryland/704/1977 H13N6)

RDRP_I78A3

Influenza A virus (strain A/Mallard/New York/6750/1978 H2N2)

RDRP_I78A7

Influenza A virus (strain A/Memphis/2/1978 H3N2)

RDRP_I78A8

Influenza A virus (strain A/Memphis/18/1978 H3N2)

RDRP_I78AC

Influenza A virus (strain A/Turkey/Minnesota/501/1978 H6N8)

RDRP_I79A4

Influenza A virus (strain A/Kiev/59/1979 H1N1)

RDRP_I79A7

Influenza A virus (strain A/Grey teal/Australia/2/1979 H4N4)

RDRP_I80A2

Influenza A virus (strain A/Seal/Massachusetts/1/1980 H7N7)

RDRP_I80A4

Influenza A virus (strain A/Memphis/4/1980 H3N2)

RDRP_I80AA

Influenza A virus (strain A/India/6263/1980 H1N1)

RDRP_I81A4

Influenza A virus (strain A/Swine/Ontario/2/1981 H1N1)

RDRP_I82A4

Influenza A virus (strain A/Swine/Hong Kong/126/1982 H3N2)

RDRP_I83A1

Influenza A virus (strain A/Chile/1/1983 H1N1)

RDRP_I83A4

Influenza A virus (strain A/Turkey/Ireland/1378/1983 H5N8)

RDRP_I83A5

Influenza A virus (strain A/Chicken/Pennsylvania/1/1983 H5N2)

RDRP_I83A6

Influenza A virus (strain A/Chicken/Pennsylvania/1370/1983 H5N2)

RDRP_I83A8

Influenza A virus (strain A/Hong Kong/5/1983 H3N2)

RDRP_I85A3

Influenza A virus (strain A/Chicken/Victoria/1/1985 H7N7)

RDRP_I86A3

Influenza A virus (strain A/Equine/Tennessee/5/1986 H3N8)

RDRP_I88A3

Influenza A virus (strain A/Memphis/8/1988 H3N2)

RDRP_I88A7

Influenza A virus (strain A/Wisconsin/3523/1988 H1N1)

RDRP_I93A0

Influenza A virus (strain A/Kitakyushu/159/1993 H3N2)

RDRP_I96A2

Influenza A virus (strain A/USA:Memphis/10/1996 H1N1)

RDRP_I96A3

Influenza A virus (strain A/China:Nanchang/11/1996 H1N1)

RDRP_I97A0

Influenza A virus (strain A/Chicken/Hong Kong/220/1997 H5N1 genotype Gs/Gd)

RDRP_I97A1

Influenza A virus (strain A/Hong Kong/156/1997 H5N1 genotype Gs/Gd)

3CM8

RDRP_IBDV

Avian infectious bursal disease virus (IBDV) (Gumboro disease virus)

RNA-directed RNA polymerase (RDRP) (EC 2.7.7.48) (Protein VP1)

2PGG; 2PUS; 2QJ1; 2R70; 2R72

RDRP_IBDVA

Avian infectious bursal disease virus (strain Australian 002-73) (IBDV) (Gumboro disease virus)

RNA-directed RNA polymerase (RDRP) (EC 2.7.7.48) (Protein VP1)

RDRP_INBAC

Influenza B virus (strain B/Ann Arbor/1/1966 [cold-adapted])

RDRP_INBAD

Influenza B virus (strain B/Ann Arbor/1/1966 [wild-type])

RDRP_INBP9

Influenza B virus (strain B/Panama/45/1990)

6QWL

RDRP_INCJH

Influenza C virus (strain C/Johannesburg/1/1966)

5D98; 5D9A; 6F5P; 6XZD; 6XZG; 6XZP; 6XZQ; 6XZR; 6Y0C

RDRP_INCJJ

Influenza C virus (strain C/JJ/1950)

RDRP_MRNV

Macrobrachium rosenbergii nodavirus (MrNV)

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase)

RDRP_ORSVC

Odontoglossum ringspot virus (isolate Korean Cy) (ORSV-Cy)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_PAV

Pariacoto virus (PaV)

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase) (Protein A)

RDRP_PLRVW

Potato leafroll virus (strain Potato/Netherlands/Wageningen/1989) (PLrV)

Protein P1-P2

RDRP_PMMVJ

Pepper mild mottle virus (strain Japan) (PMMV-J)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_PMMVS

Pepper mild mottle virus (strain Spain) (PMMV-S)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_PRV

Pieris rapae virus

RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (RNA replicase)

RDRP_PSVJ

Peanut stunt virus (strain J) (PSV)

RNA-directed RNA polymerase 2a (protein 2a) (EC 2.7.7.48)

RDRP_PVX

Potato virus X (PVX)

RNA replication protein (165 kDa protein) (ORF1 protein)

RDRP_PVXCP

Potato virus X (strain CP) (PVX)

RNA replication protein (165 kDa protein) (ORF1 protein)

RDRP_PVXHB

Potato virus X (strain HB) (PVX)

RNA replication protein (165 kDa protein) (ORF1 protein)

RDRP_RDVA

Rice dwarf virus (isolate Akita) (RDV)

RNA-directed RNA polymerase P1 (EC 2.7.7.48) (Replicase)

RDRP_REOVJ

Reovirus type 2 (strain D5/Jones) (T2J) (Mammalian orthoreovirus 2)

RNA-directed RNA polymerase lambda-3 (Lambda3) (EC 2.7.7.48) (Lambda3(Pol))

RDRP_ROT41

Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14]) (RV-A) (Rotavirus A (isolate B4106))

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTAD

Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTBN

Rotavirus A (strain RVA/Cow/United States/NCDV-Lincoln/1969/G6P6[1]) (RV-A) (Rotavirus A (strain Nebraska calf diarrhea virus))

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTGI

Rotavirus B (isolate RVB/Rat/United States/IDIR/1984/G1P[X]) (RV-B) (Rotavirus B (isolate infectious diarrhea of infant rats))

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTH3

Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTH6

Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTHD

Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4]) (RV-A) (Rotavirus A (strain DS1))

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTHK

Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTHL

Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTHP

Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTHS

Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTHT

Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6]) (RV-A) (Rotavirus A (strain St. Thomas 3))

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTHW

Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTPC

Rotavirus C (strain RVC/Pig/United States/Cowden/1980) (RV-C)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTPG

Rotavirus A (strain RVA/Pig/United States/Gottfried/1983/G4P2B[6]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTPY

Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTRF

Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTSP

Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A) (Simian Agent 11 (strain Patton))

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

2R7O; 2R7Q; 2R7R; 2R7S; 2R7T; 2R7U; 2R7V; 2R7W; 2R7X; 4F5X

RDRP_ROTTU

Rotavirus A (isolate RVA/Monkey/United States/TUCH/2003/G3P[24]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTW3

Rotavirus A (strain RVA/Cow/United States/WC3/1981/G6P7[5]) (RV-A) (Rotavirus (strain Wistar calf 3))

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTWI

Rotavirus A (isolate RVA/Human/United States/WI61/1983/G9P1A[8]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_ROTYO

Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein VP1)

RDRP_SCV23

Saccharomyces 23S RNA narnavirus (ScNV-23S)

RNA-directed RNA polymerase (EC 2.7.7.48) (p104)

RDRP_TBRFV

Tomato brown rugose fruit virus (isolate TOBRFV/Tomato/Jordan/Tom1-Jo/2015) (ToBRFV)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TMGMV

Tobacco mild green mosaic virus (TMGMV) (TMV strain U2)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TMOB

Tobamovirus Ob

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TMVB

Tobacco mosaic virus (strain B935A) (TMV)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TMVKR

Tobacco mosaic virus (strain Korean NC 82) (TMV)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TMVRA

Tobacco mosaic virus (strain Rakkyo) (TMV-R)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TNVD

Tobacco necrosis virus (strain D) (TNV-D)

RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p82)

RDRP_TOMK1

Tomato mosaic virus (strain Kazakh K1) (ToMV) (TMV strain K1)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TOMK2

Tomato mosaic virus (strain Kazakh K2) (ToMV) (TMV strain K2)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

RDRP_TOML

Tomato mosaic virus (strain L) (ToMV) (TMV strain tomato)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

3VKW; 3WRX; 3WRY

RDRP_TOMS1

Tomato mosaic virus (strain S-1) (ToMV)

Replicase large subunit (EC 2.1.1.-) (EC 2.7.7.-) (EC 2.7.7.48) (EC 3.6.4.13) (183 kDa protein) (RNA-directed RNA polymerase)

9 entries

Replicase polyprotein 1ab (ORF1ab polyprotein)

RPOA_EAVBU

Equine arteritis virus (strain Bucyrus) (EAV) reference strain

1MBM; 2L8K; 4IUM; 4N0N; 4N0O; 5F17; 5HBZ; 5HC1

RPOA_PRRSB

Porcine reproductive and respiratory syndrome virus (strain HB-1) (PRRSV) reference strain

RPOA_PRRSL

Porcine reproductive and respiratory syndrome virus (strain Lelystad) (PRRSV) reference strain

RPOA_SHFV

Simian hemorrhagic fever virus (SHFV) reference strain

RPOA_LDVC

Lactate dehydrogenase elevating virus (strain C) (LDV)

RPOA_LDVP

Lactate dehydrogenase elevating virus (strain Plagemann) (LDV)

RPOA_PRRS1

Porcine reproductive and respiratory syndrome virus (strain 16244B) (PRRSV)

5EYI; 5YLX

RPOA_PRRSR

Porcine reproductive and respiratory syndrome virus (strain VR-2332) (PRRSV)

RPOA_PRRSS

Porcine reproductive and respiratory syndrome virus (isolate Pig/United States/SD 01-08/2001) (PRRSV)

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