Lentivirus

Enveloped, spherical to pleomorphic in shape, 80-100 nm in diameter. Mature capsid contains 1572 capsid proteins.

Monopartite, linear, dimeric, ssRNA(+) genome of 9,75 kb, with a 5'-cap and a 3’poly-A tail. There are two long terminal repeats (LTRs) of about 600nt long at the 5' and 3' ends. The LTRs contain the U3, R, and U5 regions. There are also a primer binding site (PBS) at the 5’end and a polypurine tract (PPT) at the 3’end.

GENE EXPRESSION

The integrated provirus utilizes the promotor elements in the 5’LTR to drive transcription. This gives rise to the unspliced full length mRNA that will serve as genomic RNA to be packaged into virions or used as a template for translation of gag and gag-(pro)pol (1 ribosomal frameshift) polyproteins. The uncompletely spliced mRNAs encode env that is cleaved into SU and TM envelope proteins, and the accessory proteins vif, vpu, and vpr. Completely spliced mRNAs encode Rev, Tat and Nef accessory proteins. Rev escorts unspliced and uncompletely spliced RNAs out of the nucleus of infected cells.

REPLICATION

NUCLEAR

Lytic replication:

  1. Virus attaches to host receptors through the SU glycoprotein (gp120), with subsequent interaction with a chemokine coreceptor. TM glycoprotein (gp41) mediates fusion with cell membrane.
  2. Internalization and partial uncoating.
  3. ssRNA(+) genome is copied into a linear dsDNA molecule by the reverse transcriptase.
  4. Nuclear entry of the viral dsDNA which is covalently and randomly integrated into the cell’s genome by the viral integrase (=provirus).
  5. Transcription of provirus by Pol II produces viral spliced and unspliced RNAs.
  6. Translation of spliced viral RNAs produces tat, rev, and nef proteins.
  7. Rev mediates nuclear export of the uncompletely spliced RNAs.
  8. Translation of unspliced viral RNAs produces Env, Gag and Gag-Pol polyproteins.
  9. Assembly of the virion at the host cellular membrane and packaging of the viral RNA genome.
  10. Budding through the plasma membrane and release of the virions.
  11. Proteolytic processing of the precursors polyproteins by viral protease and maturation of the virions.

Latent replication : replication as a provirus integrated in the host chromosome.

Host-virus interaction

Adaptive immune response inhibition

Lentiviruses have evolved different strategies to inhibit the host adaptive immune response. HIV-1 TAT acts at the transcriptional level by modifying proteasome composition by upregulating the LMP7 and MECL1 subunits and downregulating the LMP2 subunit, thereby promoting presentation of cryptic and subdominant CTL epitopes.

Three other HIV-1 proteins, Nef, Env and Vpu, contribute to downregulate CD4. Env forms a complex with CD4 in the endoplasmic reticulum, and retains the receptor in this compartment. Nef and Vpu target the receptor for degradation in the lysosome and the proteasome, respectively.

Apoptosis modulation

Vpr plays a role in the “induction of apoptosis” in HIV-1 infected cells via destabilization of the mitochondrial membrane leading to cytochrome C release and activation of the host caspase 9/3 pathway.

Autophagy modulation

HIV-1 Tat suppressed the induction of autophagy-associated genes and inhibited the formation of autophagosomes process ,.

Cell-cycle modulation

The Vpr protein form HIV-1 and HIV-2 induces a cell cycle arrest at G2/M transition through inactivation of the host cyclinB/cdc2 complex .

Innate immune response inhibition

Tat can inhibit PKR activity by both RNA-dependent and RNA-independent mechanisms .

Matching UniProtKB/Swiss-Prot entries

679 entries grouped by strain (browse by keywords)

All proteins are shown (view only 333 complete proteome entries)

9 entries

Human immunodeficiency virus type 1 group M subtype A (isolate MAL) (HIV-1) reference strain

Select_allDeselect_all
VIF_HV1MA Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPU_HV1MA Protein Vpu (U ORF protein) (Viral protein U)
VPR_HV1MA Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1MA Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1MA Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1MA Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1MA Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1MA Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1MA Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1) reference strain

Select_allDeselect_all
VIF_HV1B1 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPU_HV1B1 Protein Vpu (U ORF protein) (Viral protein U)
VPR_HV1B1 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1B1 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1B1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1B1 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1B1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

pdb 1A9M; 1AJV; 1AJX; 1AXA; 1BQM; 1BQN; 1D4H; 1D4I; 1D4J; 1DLO; 1DW6; 1EBK; 1EBW; 1EBY; 1EBZ; 1EC0; 1EC1; 1EC2; 1EC3; 1EET; 1G35; 1GNM; 1GNN; 1GNO; 1HAR; 1HBV; 1HEF; 1HEG; 1HIH; 1HMV; 1HNI; 1HNV; 1HOS; 1HPS; 1HPZ; 1HQE; 1HQU; 1HRH; 1HTE; 1HTF; 1HTG; 1HVI; 1HVK; 1HVP; 1HVU; 1HYS; 1IKV; 1IKW; 1IKX; 1IKY; 1J5O; 1KJH; 1MER; 1MES; 1MET; 1MEU; 1N5Y; 1N6Q; 1NPA; 1NPV; 1NPW; 1QE1; 1QMC; 1R0A; 1RDH; 1RTD; 1RVL; 1RVM; 1RVN; 1RVO; 1RVP; 1RVQ; 1RVR; 1S6P; 1S6Q; 1S9E; 1S9G; 1SBG; 1SUQ; 1SV5; 1T03; 1T05; 1T7K; 1TV6; 1TVR; 1UWB; 1W5V; 1W5W; 1W5X; 1W5Y; 1YT9; 1ZP8; 1ZPA; 1ZSF; 1ZSR; 2AQU; 2B5J; 2B6A; 2BAN; 2BBB; 2BE2; 2EXF; 2G69; 2HB3; 2HMI; 2HNZ; 2HS1; 2HS2; 2I4D; 2I4U; 2I4V; 2I4W; 2I4X; 2I5J; 2IAJ; 2IC3; 2IDW; 2IEO; 2JZW; 2L45; 2L46; 2L4L; 2UXZ; 2UY0; 2VG5; 2VG6; 2VG7; 2X4U; 2YKM; 2YKN; 2ZD1; 2ZE2; 3AVI; 3BGR; 3DLK; 3GGA; 3GGV; 3GGX; 3HVT; 3IG1; 3IRX; 3IS9; 3ISN; 3ITH; 3JSM; 3JYT; 3K2P; 3K4V; 3KLE; 3KLF; 3KLG; 3KLH; 3KLI; 3NDT; 3NU3; 3NU4; 3NU5; 3NU6; 3NU9; 3NUJ; 3NUO; 3OK9; 3PSU; 3QAA; 3QLH; 3QO9; 3TKG; 3TKW; 3TL9; 3TLH; 3V4I; 3V6D; 3V81; 3ZPS; 3ZPT; 3ZPU; 4COE; 4CP7; 4CPQ; 4CPR; 4CPS; 4CPT; 4CPU; 4CPW; 4CPX; 4DG1; 4G1Q; 4G8G; 4G8I; 4G9D; 4G9F; 4H4M; 4H4O; 4I2P; 4I2Q; 4ICL; 4ID5; 4IDK; 4IFV; 4IFY; 4IG0; 4IG3; 4KFB; 4KKO; 4KO0; 4LSL; 4LSN; 4MFB; 4O44; 4O4G; 4OJR; 4PQU; 4PUO; 4PWD; 4Q0B; 4QAG; 4R5P; 4RW4; 4RW6; 4RW7; 4RW8; 4RW9; 4U8W; 4WE1; 4YE3; 4YHQ; 4ZIP; 4ZLS; 5AGZ; 5AH6; 5AH7; 5AH8; 5AH9; 5AHA; 5AHB; 5AHC; 5BRY; 5BS4; 5C24; 5C25; 5C42; 5CYM; 5CYQ; 5D3G; 5FDL; 5HBM; 5HLF; 5HP1; 5HRO; 5I3U; 5I42; 5J1E; 5JFP; 5JFU; 5JG1; 5T6Z; 5T70; 5TEP; 5TER; 5TW3; 5TXL; 5TXM; 5TXN; 5TXO; 5TXP

REV_HV1B1 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1B1 Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI) (HIV-1) reference strain

Select_allDeselect_all
VIF_HV1BR Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1BR Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1BR Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1BR Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1BR Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1BR Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1BR Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1BR Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1BR Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) (HIV-1) reference strain

Select_allDeselect_all
TAT_HV1H2 Protein Tat (Transactivating regulatory protein)
VIF_HV1H2 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPU_HV1H2 Protein Vpu (U ORF protein) (Viral protein U)
VPR_HV1H2 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1H2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1H2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1H2 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1H2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1H2 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate MN) (HIV-1) reference strain

Select_allDeselect_all
VIF_HV1MN Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1MN Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1MN Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1MN Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1MN Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1MN Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1MN Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1MN Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1MN Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group M subtype D (isolate ELI) (HIV-1) reference strain

Select_allDeselect_all
VIF_HV1EL Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1EL Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1EL Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1EL Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1EL Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1EL Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1EL Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1EL Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1EL Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850) (HIV-1) reference strain

Select_allDeselect_all
VIF_HV1VI Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1VI Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1VI Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1VI Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1VI Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1VI Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1VI Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1VI Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1VI Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group N (isolate YBF30) (HIV-1) reference strain

Select_allDeselect_all
VIF_HV1YF Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPU_HV1YF Protein Vpu (U ORF protein) (Viral protein U)
VPR_HV1YF Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1YF Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1YF Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1YF Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1YF Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1YF Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1YF Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate BEN) (HIV-2) reference strain

Select_allDeselect_all
VIF_HV2BE Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_HV2BE Protein Vpx (Viral protein X) (X ORF protein)
VPR_HV2BE Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV2BE Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2BE Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2BE Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2BE Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2BE Protein Rev (Regulator of expression of viral proteins)
TAT_HV2BE Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate ST) (HIV-2) reference strain

Select_allDeselect_all
VIF_HV2ST Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_HV2ST Protein Vpx (Viral protein X) (X ORF protein)
VPR_HV2ST Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV2ST Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2ST Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2ST Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2ST Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2ST Protein Rev (Regulator of expression of viral proteins)
TAT_HV2ST Protein Tat (Transactivating regulatory protein)

9 entries

Simian immunodeficiency virus (isolate EK505) (SIV-cpz) (Chimpanzee immunodeficiency virus) reference strain

Select_allDeselect_all
VIF_SIVEK Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_SIVEK Protein Vpr (R ORF protein) (Viral protein R)
VPU_SIVEK Protein Vpu (U ORF protein) (Viral protein U)
ENV_SIVEK Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVEK Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVEK Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_SIVEK Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVEK Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_SIVEK Protein Tat (Transactivating regulatory protein)

9 entries

Simian immunodeficiency virus (isolate MB66) (SIV-cpz) (Chimpanzee immunodeficiency virus) reference strain

Select_allDeselect_all
VIF_SIVMB Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_SIVMB Protein Vpr (R ORF protein) (Viral protein R)
VPU_SIVMB Protein Vpu (U ORF protein) (Viral protein U)
ENV_SIVMB Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVMB Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
NEF_SIVMB Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_SIVMB Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVMB Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_SIVMB Protein Tat (Transactivating regulatory protein)

9 entries

Simian immunodeficiency virus (isolate TAN1) (SIV-cpz) (Chimpanzee immunodeficiency virus) reference strain

Select_allDeselect_all
TAT_SIVTN Protein Tat (Transactivating regulatory protein)
VIF_SIVTN Virion infectivity factor (Vif)
VPU_SIVTN Protein Vpu (U ORF protein) (Viral protein U)
VPR_SIVTN Protein Vpr (R ORF protein) (Viral protein R)
ENV_SIVTN Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVTN Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVTN Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVTN Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVTN Protein Rev (Regulator of expression of viral proteins)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2) (HIV-1)

Select_allDeselect_all
TAT_HV1A2 Protein Tat (Transactivating regulatory protein)
VIF_HV1A2 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1A2 Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1A2 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1A2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1A2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1A2 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1A2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1A2 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF) (HIV-1)

Select_allDeselect_all
TAT_HV1JR Protein Tat (Transactivating regulatory protein)
VIF_HV1JR Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1JR Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1JR Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1JR Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1JR Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1JR Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1JR Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1JR Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3) (HIV-1)

Select_allDeselect_all
VPR_HV1RH Protein Vpr (R ORF protein) (Viral protein R)
VIF_HV1RH Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPU_HV1RH Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1RH Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1RH Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1RH Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1RH Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1RH Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1RH Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate YU-2) (HIV-1)

Select_allDeselect_all
TAT_HV1Y2 Protein Tat (Transactivating regulatory protein)
VPU_HV1Y2 Protein Vpu (U ORF protein) (Viral protein U)
VIF_HV1Y2 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1Y2 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1Y2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1Y2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1Y2 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1Y2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1Y2 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)

9 entries

Human immunodeficiency virus type 1 group M subtype B (strain 89.6) (HIV-1)

Select_allDeselect_all
VPR_HV1B9 Protein Vpr (R ORF protein) (Viral protein R)
VIF_HV1B9 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPU_HV1B9 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1B9 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1B9 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1B9 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1B9 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1B9 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1B9 Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025) (HIV-1)

Select_allDeselect_all
VPR_HV192 Protein Vpr (R ORF protein) (Viral protein R)
VIF_HV192 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPU_HV192 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV192 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV192 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV192 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV192 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV192 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV192 Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220) (HIV-1)

Select_allDeselect_all
TAT_HV1ET Protein Tat (Transactivating regulatory protein)
VIF_HV1ET Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1ET Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1ET Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1ET Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1ET Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1ET Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1ET Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1ET Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)

9 entries

Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020) (HIV-1)

Select_allDeselect_all
TAT_HV193 Protein Tat (Transactivating regulatory protein)
VPU_HV193 Protein Vpu (U ORF protein) (Viral protein U)
VIF_HV193 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV193 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV193 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV193 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV193 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV193 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV193 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)

9 entries

Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056) (HIV-1)

Select_allDeselect_all
VIF_HV190 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV190 Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV190 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV190 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV190 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV190 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV190 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV190 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV190 Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group N (isolate YBF106) (HIV-1)

Select_allDeselect_all
VIF_HV1YB Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1YB Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1YB Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1YB Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1YB Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1YB Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1YB Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1YB Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1YB Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group O (isolate ANT70) (HIV-1)

Select_allDeselect_all
VIF_HV1AN Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1AN Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1AN Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1AN Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1AN Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1AN Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1AN Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1AN Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1AN Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 1 group O (isolate MVP5180) (HIV-1)

Select_allDeselect_all
VIF_HV1MV Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPU_HV1MV Protein Vpu (U ORF protein) (Viral protein U)
VPR_HV1MV Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1MV Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1MV Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1MV Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1MV Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1MV Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1MV Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate CAM2) (HIV-2)

Select_allDeselect_all
VIF_HV2CA Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_HV2CA Protein Vpx (Viral protein X) (X ORF protein)
VPR_HV2CA Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV2CA Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2CA Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2CA Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2CA Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2CA Protein Rev (Regulator of expression of viral proteins)
TAT_HV2CA Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate D194) (HIV-2)

Select_allDeselect_all
VPR_HV2D1 Protein Vpr (R ORF protein) (Viral protein R)
VIF_HV2D1 Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_HV2D1 Protein Vpx (Viral protein X) (X ORF protein)
ENV_HV2D1 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2D1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2D1 Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2D1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2D1 Protein Rev (Regulator of expression of viral proteins)
TAT_HV2D1 Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate Ghana-1) (HIV-2)

Select_allDeselect_all
VIF_HV2G1 Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_HV2G1 Protein Vpx (Viral protein X) (X ORF protein)
VPR_HV2G1 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV2G1 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2G1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2G1 Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2G1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2G1 Protein Rev (Regulator of expression of viral proteins)
TAT_HV2G1 Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate KR) (HIV-2)

Select_allDeselect_all
TAT_HV2KR Protein Tat (Transactivating regulatory protein)
VIF_HV2KR Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_HV2KR Protein Vpx (Viral protein X) (X ORF protein)
VPR_HV2KR Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV2KR Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2KR Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2KR Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2KR Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2KR Protein Rev (Regulator of expression of viral proteins)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate NIH-Z) (HIV-2)

Select_allDeselect_all
VIF_HV2NZ Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_HV2NZ Protein Vpx (Viral protein X) (X ORF protein)
VPR_HV2NZ Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV2NZ Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2NZ Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2NZ Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2NZ Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2NZ Protein Rev (Regulator of expression of viral proteins)
TAT_HV2NZ Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate ROD) (HIV-2)

Select_allDeselect_all
VIF_HV2RO Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_HV2RO Protein Vpx (Viral protein X) (X ORF protein)
VPR_HV2RO Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV2RO Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2RO Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2RO Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2RO Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2RO Protein Rev (Regulator of expression of viral proteins)
TAT_HV2RO Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate SBLISY) (HIV-2)

Select_allDeselect_all
VPR_HV2SB Protein Vpr (R ORF protein) (Viral protein R)
VIF_HV2SB Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_HV2SB Protein Vpx (Viral protein X) (X ORF protein)
ENV_HV2SB Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2SB Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2SB Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2SB Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2SB Protein Rev (Regulator of expression of viral proteins)
TAT_HV2SB Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 2 subtype B (isolate EHO) (HIV-2)

Select_allDeselect_all
VPX_HV2EH Protein Vpx (Viral protein X) (X ORF protein)
VIF_HV2EH Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2EH Protein Vpr (Viral protein R)
ENV_HV2EH Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2EH Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2EH Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2EH Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2EH Protein Rev (Regulator of expression of viral proteins)
TAT_HV2EH Protein Tat (Transactivating regulatory protein)

9 entries

Human immunodeficiency virus type 2 subtype B (isolate UC1) (HIV-2)

Select_allDeselect_all
TAT_HV2UC Protein Tat (Transactivating regulatory protein)
VIF_HV2UC Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2UC Protein Vpr (R ORF protein) (Viral protein R)
VPX_HV2UC Protein Vpx (Viral protein X) (X ORF protein)
ENV_HV2UC Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2UC Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2UC Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2UC Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2UC Protein Rev (Regulator of expression of viral proteins)

9 entries

Simian immunodeficiency virus (isolate CPZ GAB1) (SIV-cpz) (Chimpanzee immunodeficiency virus)

Select_allDeselect_all
VIF_SIVCZ Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_SIVCZ Protein Vpr (R ORF protein) (Viral protein R)
VPU_SIVCZ Protein Vpu (U ORF protein) (Viral protein U)
ENV_SIVCZ Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVCZ Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVCZ Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_SIVCZ Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVCZ Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_SIVCZ Protein Tat (Transactivating regulatory protein)

9 entries

Simian immunodeficiency virus (isolate F236/smH4) (SIV-sm) (Simian immunodeficiency virus sooty mangabey monkey)

Select_allDeselect_all
VPR_SIVS4 Protein Vpr (R ORF protein) (Viral protein R)
VPX_SIVS4 Protein Vpx (Viral protein X) (X ORF protein)
VIF_SIVS4 Virion infectivity factor (Vif) (Q protein) (SOR protein)
ENV_SIVS4 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVS4 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVS4 Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVS4 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVS4 Protein Rev (Regulator of expression of viral proteins)
TAT_SIVS4 Protein Tat (Transactivating regulatory protein)

9 entries

Simian immunodeficiency virus (isolate K6W) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

Select_allDeselect_all
VPR_SIVMK Protein Vpr (R ORF protein) (Viral protein R)
VIF_SIVMK Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_SIVMK Protein Vpx (Viral protein X) (X ORF protein)
ENV_SIVMK Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVMK Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVMK Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVMK Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVMK Protein Rev (Regulator of expression of viral proteins)
TAT_SIVMK Protein Tat (Transactivating regulatory protein)

9 entries

Simian immunodeficiency virus (isolate Mm142-83) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

Select_allDeselect_all
TAT_SIVM1 Protein Tat (Transactivating regulatory protein)
VIF_SIVM1 Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_SIVM1 Protein Vpr (R ORF protein) (Viral protein R)
VPX_SIVM1 Protein Vpx (Viral protein X) (X ORF protein)
ENV_SIVM1 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVM1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVM1 Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVM1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVM1 Protein Rev (Regulator of expression of viral proteins)

9 entries

Simian immunodeficiency virus (isolate PBj14/BCL-3) (SIV-sm) (Simian immunodeficiency virus sooty mangabey monkey)

Select_allDeselect_all
VPX_SIVSP Protein Vpx (Viral protein X) (X ORF protein)
VIF_SIVSP Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_SIVSP Protein Vpr (R ORF protein) (Viral protein R)
ENV_SIVSP Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVSP Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVSP Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVSP Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVSP Protein Rev (Regulator of expression of viral proteins)
TAT_SIVSP Protein Tat (Transactivating regulatory protein)

8 entries

Bovine immunodeficiency virus (strain R29) (BIV) (Bovine immunodeficiency-like virus)

Select_allDeselect_all
VPW_BIV29 Protein Vpw
VIF_BIV29 Virion infectivity factor (Q protein)
VPY_BIV29 Protein Vpy
ENV_BIV29 Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 62) ...
GAG_BIV29 Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p16 (MA); p2L; Capsid protein p26 (CA); p3; ...
POL_BIV29 Gag-Pol polyprotein (Pr170Gag-Pol) [Cleaved into: Matrix protein p16 (MA); p2L; Capsid protein p26 ...
REV_BIV29 Protein Rev
TAT_BIV29 Protein Tat (S ORF) (Transactivating regulatory protein) (bTat)

8 entries

Human immunodeficiency virus type 1 group M subtype B (isolate OYI) (HIV-1)

Select_allDeselect_all
VIF_HV1OY Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1OY Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1OY Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1OY Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1OY Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1OY Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1OY Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1OY Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 1 group M subtype D (isolate NDK) (HIV-1)

Select_allDeselect_all
VIF_HV1ND Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPU_HV1ND Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1ND Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1ND Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1ND Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1ND Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1ND Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1ND Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34) (HIV-1)

Select_allDeselect_all
VIF_HV1Z2 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1Z2 Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1Z2 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1Z2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1Z2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1Z2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1Z2 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1Z2 Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255) (HIV-1)

Select_allDeselect_all
VPR_HV1MP Protein Vpr (R ORF protein) (Viral protein R)
VIF_HV1MP Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
ENV_HV1MP Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1MP Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1MP Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1MP Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1MP Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1MP Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257) (HIV-1)

Select_allDeselect_all
VIF_HV1M2 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1M2 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1M2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1M2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1M2 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1M2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1M2 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1M2 Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 1 group M subtype G (isolate 92NG083) (HIV-1)

Select_allDeselect_all
VIF_HV19N Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV19N Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV19N Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV19N Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV19N Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV19N Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV19N Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV19N Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 1 group M subtype H (isolate VI991) (HIV-1)

Select_allDeselect_all
VPR_HV1V9 Protein Vpr (R ORF protein) (Viral protein R)
VIF_HV1V9 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
ENV_HV1V9 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1V9 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1V9 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1V9 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1V9 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1V9 Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 1 group M subtype J (isolate SE9173) (HIV-1)

Select_allDeselect_all
VIF_HV1S9 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1S9 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1S9 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1S9 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1S9 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1S9 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1S9 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1S9 Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 1 group M subtype J (isolate SE9280) (HIV-1)

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VIF_HV1S2 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1S2 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1S2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1S2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1S2 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1S2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1S2 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1S2 Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535) (HIV-1)

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VIF_HV196 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV196 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV196 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV196 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV196 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV196 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV196 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV196 Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11) (HIV-1)

Select_allDeselect_all
VPR_HV197 Protein Vpr (R ORF protein) (Viral protein R)
VIF_HV197 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
ENV_HV197 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV197 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV197 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV197 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV197 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV197 Protein Tat (Transactivating regulatory protein)

8 entries

Human immunodeficiency virus type 2 subtype B (isolate D205) (HIV-2)

Select_allDeselect_all
VIF_HV2D2 Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2D2 Protein Vpr (R ORF protein) (Viral protein R)
VPX_HV2D2 Protein Vpx (Viral protein X) (X ORF protein)
ENV_HV2D2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV2D2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV2D2 Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2D2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV2D2 Protein Rev (Regulator of expression of viral proteins)

8 entries

Simian immunodeficiency virus (isolate GB1) (SIV-mnd) (Simian immunodeficiency virus mandrill)

Select_allDeselect_all
VIF_SIVGB Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_SIVGB Protein Vpr (R ORF protein) (Viral protein R)
ENV_SIVGB Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVGB Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVGB Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVGB Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVGB Protein Rev (Regulator of expression of viral proteins)
TAT_SIVGB Protein Tat (Transactivating regulatory protein)

8 entries

Simian immunodeficiency virus agm.grivet (isolate AGM gr-1) (SIV-agm.gri) (Simian immunodeficiency virus African green monkey grivet)

Select_allDeselect_all
VIF_SIVG1 Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_SIVG1 Protein Vpx (Viral protein X) (X ORF protein)
ENV_SIVG1 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVG1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVG1 Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVG1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVG1 Protein Rev (Regulator of expression of viral proteins)
TAT_SIVG1 Protein Tat (Transactivating regulatory protein)

8 entries

Simian immunodeficiency virus agm.vervet (isolate AGM TYO-1) (SIV-agm.ver) (Simian immunodeficiency virus African green monkey vervet)

Select_allDeselect_all
VIF_SIVVT Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_SIVVT Protein Vpx (Viral protein X) (X ORF protein)
ENV_SIVVT Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVVT Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVVT Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVVT Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVVT Protein Rev (Regulator of expression of viral proteins)
TAT_SIVVT Protein Tat (Transactivating regulatory protein)

8 entries

Simian immunodeficiency virus agm.vervet (isolate AGM155) (SIV-agm.ver) (Simian immunodeficiency virus African green monkey vervet)

Select_allDeselect_all
VIF_SIVV1 Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_SIVV1 Protein Vpx (Viral protein X) (X ORF protein)
ENV_SIVV1 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVV1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVV1 Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVV1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVV1 Protein Rev (Regulator of expression of viral proteins)
TAT_SIVV1 Protein Tat (Transactivating regulatory protein)

8 entries

Simian immunodeficiency virus agm.vervet (isolate AGM3) (SIV-agm.ver) (Simian immunodeficiency virus African green monkey vervet)

Select_allDeselect_all
VIF_SIVVG Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_SIVVG Protein Vpx (Viral protein X) (X ORF protein)
ENV_SIVVG Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_SIVVG Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_SIVVG Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVVG Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_SIVVG Protein Rev (Regulator of expression of viral proteins)
TAT_SIVVG Protein Tat (Transactivating regulatory protein)

7 entries

Feline immunodeficiency virus (strain San Diego) (FIV)

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VIF_FIVSD Virion infectivity factor
VPRL_FIVSD Probable Vpr-like protein (ORF2) (OrfA) (Protein Tat)
YOR3_FIVSD Uncharacterized protein ORF3 (ORFD)
ENV_FIVSD Envelope glycoprotein gp150 (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 100) ...
GAG_FIVSD Gag polyprotein [Cleaved into: Matrix protein p15 (MA); Capsid protein p24 (CA); p1; Nucleocapsid ...
POL_FIVSD Pol polyprotein [Cleaved into: Protease (EC 3.4.23.-) (Retropepsin); Reverse ...
REV_FIVSD Probable protein Rev (3'ORF) (ART/TRS) (Anti-repression transactivator) (ORF4) (ORFH) (Regulator of ...

7 entries

Human immunodeficiency virus type 1 group M subtype B (isolate LW123) (HIV-1)

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VIF_HV1LW Truncated virion infectivity factor (Vif) (SOR protein) [Cleaved into: Truncated p17]
VPU_HV1LW Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1LW Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1LW Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1LW Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1LW Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1LW Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)

7 entries

Human immunodeficiency virus type 1 group M subtype G (isolate SE6165) (HIV-1)

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TAT_HV1SE Protein Tat (Transactivating regulatory protein)
VPR_HV1SE Protein Vpr (R ORF protein) (Viral protein R)
VIF_HV1SE Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
GAG_HV1SE Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1SE Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1SE Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1SE Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)

7 entries

Ovine maedi visna related virus (strain South Africa) (SA-OMVV) (Ovine lentivirus)

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VIF_OMVVS Virion infectivity factor (Q protein)
VPRL_OMVVS Probable Vpr-like protein (Protein S) (Protein Tat)
VPW_OMVVS Putative uncharacterized protein W
ENV_OMVVS Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein (Glycoprotein 135) ...
GAG_OMVVS Gag polyprotein [Cleaved into: Matrix protein p16; Capsid protein p25; Nucleocapsid protein p14]
POL_OMVVS Pol polyprotein [Cleaved into: Protease (EC 3.4.23.-) (Retropepsin); Reverse ...
REV_OMVVS Protein Rev

6 entries

Caprine arthritis encephalitis virus (strain Cork) (CAEV-Co)

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VIF_CAEVC Virion infectivity factor (Q protein) (SOR protein)
VPRL_CAEVC Probable Vpr-like protein (Protein S) (Protein Tat)
ENV_CAEVC Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (Glycoprotein 135) (gp135); ...
GAG_CAEVC Gag polyprotein [Cleaved into: Matrix protein p16; Capsid protein p25; Nucleocapsid protein p14]
POL_CAEVC Pol polyprotein [Cleaved into: Protease (Retropepsin) (EC 3.4.23.-); Reverse ...
REV_CAEVC Protein Rev (Rev-C)

6 entries

Feline immunodeficiency virus (isolate Petaluma) (FIV)

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VIF_FIVPE Virion infectivity factor
VPRL_FIVPE Probable Vpr-like protein (ORF2) (OrfA) (Protein Tat)
ENV_FIVPE Envelope glycoprotein gp150 (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 100) ...
GAG_FIVPE Gag polyprotein [Cleaved into: Matrix protein p15 (MA); Capsid protein p24 (CA); p1; Nucleocapsid ...
POL_FIVPE Pol polyprotein [Cleaved into: Protease (Retropepsin) (EC 3.4.23.-); Reverse ...
REV_FIVPE Probable protein Rev (3'ORF) (ART/TRS) (Anti-repression transactivator) (ORF4) (ORFH) (Regulator of ...

6 entries

Human immunodeficiency virus type 1 group M subtype A (isolate U455) (HIV-1)

Select_allDeselect_all
VIF_HV1U4 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
GAG_HV1U4 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
NEF_HV1U4 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
POL_HV1U4 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
REV_HV1U4 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1U4 Protein Tat (Transactivating regulatory protein)

6 entries

Human immunodeficiency virus type 1 group M subtype B (isolate HXB3) (HIV-1)

Select_allDeselect_all
VPR_HV1H3 Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1H3 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1H3 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
NEF_HV1H3 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
REV_HV1H3 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1H3 Protein Tat (Transactivating regulatory protein)

6 entries

Human immunodeficiency virus type 1 group M subtype B (isolate SC) (HIV-1)

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VPR_HV1SC Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1SC Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1SC Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
NEF_HV1SC Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
REV_HV1SC Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1SC Protein Tat (Transactivating regulatory protein)

6 entries

Jembrana disease virus (JDV)

Select_allDeselect_all
VIF_JEMBR Virion infectivity factor (Vif)
ENV_JEMBR Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 62) ...
GAG_JEMBR Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p16 (MA); Capsid protein p26 (CA); ...
POL_JEMBR Gag-Pol polyprotein (Pr170Gag-Pol) [Cleaved into: Matrix protein p16 (MA); Capsid protein p26 (CA); ...
REV_JEMBR Protein Rev
TAT_JEMBR Protein Tat (Transactivating regulatory protein) (jTat)

6 entries

Maedi visna virus (strain 1514) (MVV) (Visna lentivirus)

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VIF_VILV Virion infectivity factor (Q protein)
VPRL_VILV Probable Vpr-like protein (Protein S) (Protein Tat)
ENV_VILV Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein (Glycoprotein 135) ...
GAG_VILV Gag polyprotein [Cleaved into: Matrix protein p16; Capsid protein p25; Nucleocapsid protein p14]
POL_VILV Pol polyprotein [Cleaved into: Protease (EC 3.4.23.-) (Retropepsin); Reverse ...
REV_VILV Protein Rev

6 entries

Maedi visna virus (strain KV1772) (MVV) (Visna lentivirus)

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VIF_VILVK Virion infectivity factor (Q protein)
VPRL_VILVK Probable Vpr-like protein (Protein S) (Protein Tat)
ENV_VILVK Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein (Glycoprotein 135) ...
GAG_VILVK Gag polyprotein [Cleaved into: Matrix protein p16; Capsid protein p25; Nucleocapsid protein p14]
POL_VILVK Pol polyprotein [Cleaved into: Protease (EC 3.4.23.-) (Retropepsin); Reverse ...
REV_VILVK Protein Rev

6 entries

Simian immunodeficiency virus (isolate K78) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

Select_allDeselect_all
TAT_SIVML Protein Tat (Transactivating regulatory protein)
VPX_SIVML Protein Vpx (Viral protein X) (X ORF protein)
VPR_SIVML Protein Vpr (R ORF protein) (Viral protein R)
ENV_SIVML Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
NEF_SIVML Protein Nef (3'ORF) (Negative factor) (F-protein)
REV_SIVML Protein Rev (Regulator of expression of viral proteins)

5 entries

Equine infectious anemia virus (isolate CL22) (EIAV)

Select_allDeselect_all
ENV_EIAVC Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 90) ...
GAG_EIAVC Gag polyprotein [Cleaved into: Matrix protein p15 (MA); Capsid protein p26 (CA); p1; Nucleocapsid ...
POL_EIAVC Pol polyprotein [Cleaved into: Protease (Retropepsin) (EC 3.4.23.-); Reverse ...
REV_EIAVC Protein Rev (3'-ORF protein)
TAT_EIAVC Protein Tat (E-Tat) (Transactivating regulatory protein) (eTat)

5 entries

Equine infectious anemia virus (strain Wyoming) (EIAV)

Select_allDeselect_all
TAT_EIAVY Protein Tat (E-Tat) (Transactivating regulatory protein) (eTat)
ENV_EIAVY Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 90) ...
GAG_EIAVY Gag polyprotein [Cleaved into: Matrix protein p15 (MA); Capsid protein p26 (CA); p1; Nucleocapsid ...
POL_EIAVY Pol polyprotein [Cleaved into: Protease (Retropepsin) (EC 3.4.23.-); Reverse ...
REV_EIAVY Protein Rev (3'-ORF protein)

5 entries

Human immunodeficiency virus type 1 group M subtype B (isolate CDC-451) (HIV-1)

Select_allDeselect_all
VPU_HV1C4 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1C4 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1C4 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
REV_HV1C4 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1C4 Protein Tat (Transactivating regulatory protein)

5 entries

Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1)

Select_allDeselect_all
VIF_HV1N5 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1N5 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1N5 Truncated surface protein (SU) (Glycoprotein 120) (gp120)
GAG_HV1N5 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1N5 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

5 entries

Human immunodeficiency virus type 1 group M subtype B (isolate PCV12) (HIV-1)

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TAT_HV112 Protein Tat (Transactivating regulatory protein)
VPR_HV112 Protein Vpr (R ORF protein) (Viral protein R)
VIF_HV112 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
NEF_HV112 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
REV_HV112 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)

5 entries

Human immunodeficiency virus type 1 group M subtype B (isolate SF162) (HIV-1)

Select_allDeselect_all
VPU_HV1S1 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1S1 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
NEF_HV1S1 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
REV_HV1S1 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1S1 Protein Tat (Transactivating regulatory protein)

5 entries

Human immunodeficiency virus type 1 group M subtype B (isolate SF33) (HIV-1)

Select_allDeselect_all
VPR_HV1S3 Protein Vpr (R ORF protein) (Viral protein R)
ENV_HV1S3 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
NEF_HV1S3 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
REV_HV1S3 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1S3 Protein Tat (Transactivating regulatory protein)

5 entries

Human immunodeficiency virus type 1 group M subtype D (isolate Z6) (HIV-1)

Select_allDeselect_all
VIF_HV1Z6 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
ENV_HV1Z6 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
NEF_HV1Z6 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]
REV_HV1Z6 Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression of viral proteins)
TAT_HV1Z6 Protein Tat (Transactivating regulatory protein)

5 entries

Maedi visna virus (strain 1514 / clone LV1-1KS1) (MVV) (Visna lentivirus)

Select_allDeselect_all
VPRL_VILV1 Probable Vpr-like protein (Protein S) (Protein Tat)
VIF_VILV1 Virion infectivity factor (Q protein)
ENV_VILV1 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein (Glycoprotein 135) ...
GAG_VILV1 Gag polyprotein [Cleaved into: Matrix protein p16; Capsid protein p25; Nucleocapsid protein p14]
POL_VILV1 Pol polyprotein [Cleaved into: Protease (Retropepsin) (EC 3.4.23.-); Reverse ...

5 entries

Maedi visna virus (strain 1514 / clone LV1-1KS2) (MVV) (Visna lentivirus)

Select_allDeselect_all
VIF_VILV2 Virion infectivity factor (Q protein)
VPRL_VILV2 Probable Vpr-like protein (Protein S) (Protein Tat)
ENV_VILV2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein (Glycoprotein 135) ...
GAG_VILV2 Gag polyprotein [Cleaved into: Matrix protein p16; Capsid protein p25; Nucleocapsid protein p14]
POL_VILV2 Pol polyprotein [Cleaved into: Protease (Retropepsin) (EC 3.4.23.-); Reverse ...

4 entries

Equine infectious anemia virus (isolate 1369) (EIAV)

Select_allDeselect_all
ENV_EIAV9 Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 90) ...
GAG_EIAV9 Gag polyprotein [Cleaved into: Matrix protein p15 (MA); Capsid protein p26 (CA); p1; Nucleocapsid ...
POL_EIAV9 Pol polyprotein [Cleaved into: Protease (Retropepsin) (EC 3.4.23.-); Reverse ...
REV_EIAV9 Protein Rev (3'-ORF protein)

4 entries

Feline immunodeficiency virus (isolate TM2) (FIV)

Select_allDeselect_all
VIF_FIVT2 Virion infectivity factor
ENV_FIVT2 Envelope glycoprotein gp150 (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 100) ...
GAG_FIVT2 Gag polyprotein [Cleaved into: Matrix protein p15 (MA); Capsid protein p24 (CA); p1; Nucleocapsid ...
POL_FIVT2 Pol polyprotein [Cleaved into: Protease (EC 3.4.23.-) (Retropepsin); Reverse ...

4 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BH5) (HIV-1)

Select_allDeselect_all
VIF_HV1B5 Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]
VPR_HV1B5 Protein Vpr (R ORF protein) (Viral protein R)
GAG_HV1B5 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1B5 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

3 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BH8) (HIV-1)

Select_allDeselect_all
VPU_HV1B8 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1B8 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
NEF_HV1B8 Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]

3 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BRVA) (HIV-1)

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VPU_HV1BN Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1BN Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
NEF_HV1BN Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]

3 entries

Human immunodeficiency virus type 1 group M subtype B (isolate JH32) (HIV-1)

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VPU_HV1J3 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1J3 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
GAG_HV1J3 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...

2 entries

Caprine arthritis encephalitis virus (CAEV)

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VPU_CAEV Protein Vpu (ORF-X protein) (Protein UPX)
REV_CAEV Protein Rev (Rev-C)

2 entries

Caprine arthritis encephalitis virus (strain 63) (CAEV-63)

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VPRL_CAEVG Probable Vpr-like protein (Protein S) (Protein Tat)
ENV_CAEVG Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (Glycoprotein 135) (gp135); ...

2 entries

Feline immunodeficiency virus (isolate Wo) (FIV)

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ENV_FIVWO Envelope glycoprotein gp150 (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 100) ...
GAG_FIVWO Gag polyprotein [Cleaved into: Matrix protein p15 (MA); Capsid protein p24 (CA); p1; Nucleocapsid ...

2 entries

Human immunodeficiency virus type 1 group M subtype A (isolate Z321) (HIV-1)

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ENV_HV1ZH Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...
NEF_HV1ZH Protein Nef (3'ORF) (Negative factor) (F-protein) [Cleaved into: C-terminal core protein]

2 entries

Human immunodeficiency virus type 1 group M subtype U (isolate Z3) (HIV-1)

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VPU_HV1Z3 Protein Vpu (U ORF protein) (Viral protein U)
ENV_HV1Z3 Truncated surface protein (SU) (Glycoprotein 120) (gp120)

2 entries

Simian immunodeficiency virus (isolate African mandrill) (SIV-mnd)

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REV_SIVAM Protein Rev (Regulator of expression of viral proteins)
TAT_SIVAM Protein Tat (Transactivating regulatory protein)

1 entry

Equine infectious anemia virus (isolate P3.2-1) (EIAV)

ENV_EIAV1 Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 90) ...

1 entry

Equine infectious anemia virus (isolate P3.2-2) (EIAV)

ENV_EIAV2 Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 90) ...

1 entry

Equine infectious anemia virus (isolate P3.2-3) (EIAV)

ENV_EIAV3 Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 90) ...

1 entry

Equine infectious anemia virus (isolate P3.2-5) (EIAV)

ENV_EIAV5 Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 90) ...

1 entry

Equine infectious anemia virus (strain WSU5) (EIAV)

ENV_EIAVW Envelope glycoprotein (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 90) ...

1 entry

Feline immunodeficiency virus (strain UK2) (FIV)

ENV_FIVU2 Envelope glycoprotein gp150 (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 100) ...

1 entry

Feline immunodeficiency virus (strain UK8) (FIV)

ENV_FIVU8 Envelope glycoprotein gp150 (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 100) ...

1 entry

Feline immunodeficiency virus (strain UT-113) (FIV)

ENV_FIVU1 Envelope glycoprotein gp150 (Env polyprotein) [Cleaved into: Surface protein (SU) (Glycoprotein 100) ...

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate KB-1/ETR) (HIV-1)

ENV_HV1KB Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate MFA) (HIV-1)

ENV_HV1MF Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate N1T-A) (HIV-1)

VIF_HV1NA Virion infectivity factor (Vif) (SOR protein) [Cleaved into: p17; p7]

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate WMJ1) (HIV-1)

ENV_HV1W1 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate WMJ22) (HIV-1)

ENV_HV1W2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...

1 entry

Human immunodeficiency virus type 1 group M subtype D (isolate Z84) (HIV-1)

ENV_HV1Z8 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...

1 entry

Human immunodeficiency virus type 2 subtype A (isolate ST/24.1C#2) (HIV-2)

ENV_HV2S2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...

1 entry

Simian immunodeficiency virus (isolate 1A11) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

NEF_SIVMA Protein Nef (3'ORF) (Negative factor) (F-protein)

1 entry

Simian immunodeficiency virus (isolate Mm251) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

ENV_SIVM2 Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) ...

1 entry

Simian immunodeficiency virus (isolate STM) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

GAG_SIVMS Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...

1 entry

Simian immunodeficiency virus AGM.tantalus (SIV-agm.tan) (Simian immunodeficiency virus African green monkey tantalus)

VIF_SIVTA Virion infectivity factor (Vif) (Q protein) (SOR protein)