Orbivirus (taxid:10892)

VIRION

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Non enveloped, icosahedral, non-turreted virion with a triple capsid structure, about 80 nm in diameter. The intermediate capsid has a T=13 icosahedral symmetry, the inner capsid a T=2* icosahedral symmetry.

Virion maturation schemes
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GENOME

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Segmented linear dsRNA genome. Contains 10 segments coding for 12 proteins. Segments size range from 822 to 3,954 bp (BTV). Genome total size is 19,200 bp (BTV).

GENE EXPRESSION

The dsRNA genome is never completely uncoated, to prevent activation of antiviral state by the cell in response to dsRNA. The viral polymerase VP1 synthesizes a capped mRNA from each dsRNA segment. This capped mRNA is translocated to the cell cytoplasm where it is translated. VP6(a), NS3(a) and NS4 are presumably expressed by leaky scanning

ENZYMES

REPLICATION

CYTOPLASMIC

  1. Attachment to host receptors mediates clathrin-mediated endocytosis of virus into host cell.
  2. Particles are partially uncoated in endolysosomes, but not entirely, and penetrate in the cytoplasm.
  3. Early transcription of the dsRNA genome by viral polymerase occurs inside this sub-viral particle (naked core), so that dsRNA is never exposed to the cytoplasm.
  4. Full-length plus-strand transcripts from each of the dsRNA segments are synthesized. These plus-strand transcripts are used as templates for translation.
  5. Viral proteins and genomic RNAs aggregates in cytoplasmic viral factories.
  6. (+)RNAs are encapsidated in a sub-viral particle, in which they are transcribed to give RNA (-) molecules with which they become base-paired to produce dsRNA genomes.
  7. The capsid is assembled on the sub-viral particle.
  8. Mature virions are released presumably following cell death and associated breakdown of host plasma membrane.

Host-virus interaction

Apoptosis modulation

Bluetongue virus mediates host cell apoptosis via caspases activaton (caspases-8, caspases-9, caspase-3, and caspase-7) .

Innate immune response inhibition

Bluetongue virus NS4 protein might also be involved in counteracting the antiviral response of the host .

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

101 entries grouped by strain

11 entries

Bluetongue virus 10 (isolate USA) (BTV 10) reference strain

Select_allDeselect_all
VP8_BTV10 Non-structural protein P8 (Non-structural protein NS3) [Cleaved into: Non-structural protein NS3A]
VP6B_BTV10 Protein VP6-B (Minor inner core protein VP6-B)
VP7_BTV10 Core protein VP7
VP6A_BTV10 Protein VP6-A (Minor inner core protein VP6-A)
VP2_BTV10 Outer capsid protein VP2
VP4_BTV10 Core protein VP4
VP5_BTV10 Outer capsid protein VP5
VP3_BTV10 Core protein VP3 (Major inner capsid protein)
RDRP_BTV10 RNA-directed RNA polymerase (EC 2.7.7.48) (VP1)
VNS2_BTV10 Non-structural protein NS2
VNS1_BTV10 Non-structural protein NS1

10 entries

African horse sickness virus (AHSV) (Orbivirus alphaequi)

Select_allDeselect_all
VP7_AHSV Core protein VP7 (Capsid protein VP7) (VP7 antigen)
RDRP_AHSV RNA-directed RNA polymerase (EC 2.7.7.48) (VP1)
VP2_AHSV Outer capsid protein VP2
VNS2_AHSV Non-structural protein NS2
VP3_AHSV Core protein VP3
VNS3_AHSV Non-structural protein NS3 [Cleaved into: Non-structural protein NS3A]
VP5_AHSV Outer capsid protein VP5
VP6_AHSV Protein VP6 (Minor inner core protein VP6)
VP4_AHSV Core protein VP4 (Inner capsid protein VP4)
VNS1_AHSV Non-structural protein NS1

8 entries

Bluetongue virus 1 (isolate South Africa) (BTV 1)

Select_allDeselect_all
VP7_BTV1S Core protein VP7
VP6_BTV1S Protein VP6 (Minor inner core protein VP6)
VP8_BTV1S Non-structural protein P8 (Non-structural protein NS3) [Cleaved into: Non-structural protein NS3A]
VP2_BTV1S Outer capsid protein VP2
VNS2_BTV1S Non-structural protein NS2
VP5_BTV1S Outer capsid protein VP5
VP3_BTV1S Core protein VP3 (Major inner capsid protein)
VNS1_BTV1S Non-structural protein NS1

8 entries

Bluetongue virus 11 (isolate USA) (BTV 11)

Select_allDeselect_all
VP8_BTV11 Non-structural protein P8 (Non-structural protein NS3) [Cleaved into: Non-structural protein NS3A]
VP2_BTV11 Outer capsid protein VP2
VP6_BTV11 Protein VP6 (Minor inner core protein VP6)
VP4_BTV11 Core protein VP4
VP7_BTV11 Core protein VP7
VP5_BTV11 Outer capsid protein VP5
VP3_BTV11 Core protein VP3 (Major inner capsid protein)
VNS1_BTV11 Non-structural protein NS1

8 entries

Bluetongue virus 13 (isolate USA) (BTV 13)

Select_allDeselect_all
VP7_BTV13 Core protein VP7
VP2_BTV13 Outer capsid protein VP2
VP5_BTV13 Outer capsid protein VP5
VP6_BTV13 Protein VP6 (Minor inner core protein VP6)
VP4_BTV13 Core protein VP4
VP8_BTV13 Non-structural protein P8 (Non-structural protein NS3) [Cleaved into: Non-structural protein NS3A]
VP3_BTV13 Core protein VP3 (Major inner capsid protein)
VNS1_BTV13 Non-structural protein NS1

8 entries

Bluetongue virus 17 (isolate USA) (BTV 17)

Select_allDeselect_all
VP7_BTV17 Core protein VP7
VP3_BTV17 Core protein VP3 (Major inner capsid protein)
VP2_BTV17 Outer capsid protein VP2
VP6_BTV17 Protein VP6 (Minor inner core protein VP6)
VNS2_BTV17 Non-structural protein NS2
VP5_BTV17 Outer capsid protein VP5
VP8_BTV17 Non-structural protein P8 (Non-structural protein NS3) [Cleaved into: Non-structural protein NS3A]
VNS1_BTV17 Non-structural protein NS1

7 entries

Bluetongue virus 2 (isolate USA) (BTV 2)

Select_allDeselect_all
VP7_BTV2A Core protein VP7
VP5_BTV2A Outer capsid protein VP5
VP6_BTV2A Protein VP6 (Minor inner core protein VP6)
VP4_BTV2A Core protein VP4
VP8_BTV2A Non-structural protein P8 (Non-structural protein NS3) [Cleaved into: Non-structural protein NS3A]
VP3_BTV2A Core protein VP3 (Major inner capsid protein)
VNS1_BTV2A Non-structural protein NS1

6 entries

Bluetongue virus 1 (isolate Australia) (BTV 1)

Select_allDeselect_all
VP7_BTV1A Core protein VP7
VP2_BTV1A Outer capsid protein VP2
VP5_BTV1A Outer capsid protein VP5
VP8_BTV1A Non-structural protein P8 (Non-structural protein NS3) [Cleaved into: Non-structural protein NS3A]
VP3_BTV1A Core protein VP3 (Major inner capsid protein)
VNS1_BTV1A Non-structural protein NS1

4 entries

African horse sickness virus 6 (AHSV-6)

Select_allDeselect_all
VP7_AHSV6 Core protein VP7 (Capsid protein VP7) (VP7 antigen)
VP3_AHSV6 Core protein VP3
VP5_AHSV6 Outer capsid protein VP5
VNS3_AHSV6 Non-structural protein NS3 [Cleaved into: Non-structural protein NS3A]

4 entries

African horse sickness virus 9 (AHSV-9)

Select_allDeselect_all
VP7_AHSV9 Core protein VP7 (Capsid protein VP7) (VP7 antigen)
VNS3_AHSV9 Non-structural protein NS3 [Cleaved into: Non-structural protein NS3A]
VP5_AHSV9 Outer capsid protein VP5
VNS1_AHSV9 Non-structural protein NS1

4 entries

Broadhaven virus (BRD)

Select_allDeselect_all
VP5_BRD Outer capsid protein VP5
VNS3_BRD Non-structural protein NS3 [Cleaved into: Non-structural protein NS3A]
VP2_BRD Structural core protein VP2
VP7_BRD Core protein VP7

4 entries

Epizootic hemorrhagic disease virus 1 (EHDV-1)

Select_allDeselect_all
VP3_EHDV1 Core protein VP3
VP2_EHDV1 Outer capsid protein VP2
VP7_EHDV1 Core protein VP7
VP5_EHDV1 Outer capsid protein VP5

3 entries

African horse sickness virus 4 (AHSV-4)

Select_allDeselect_all
VP2_AHSV4 Outer capsid protein VP2
VNS3_AHSV4 Non-structural protein NS3 [Cleaved into: Non-structural protein NS3A]
VNS1_AHSV4 Non-structural protein NS1 (Hydrophobic tubular protein)

2 entries

African horse sickness virus 3 (AHSV-3)

Select_allDeselect_all
VP6_AHSV3 Protein VP6 (Minor inner core protein VP6)
VP2_AHSV3 Outer capsid protein VP2

2 entries

Bluetongue virus 13 (isolate 13B89Z) (BTV 13)

Select_allDeselect_all
VP6_BTVBZ Protein VP6 (Minor inner core protein VP6)
NS4_BTVBZ Protein NS4

2 entries

Epizootic hemorrhagic disease virus 2 (strain Alberta) (EHDV-2)

Select_allDeselect_all
VNS2_EHDV2 Non-structural protein NS2
VNS1_EHDV2 Non-structural protein NS1 (Hydrophobic tubular protein)

1 entry

African horse sickness virus 1 (AHSV-1)

VNS3_AHSV1 Non-structural protein NS3 [Cleaved into: Non-structural protein NS3A]

1 entry

African horse sickness virus 2 (AHSV-2)

VNS3_AHSV2 Non-structural protein NS3 [Cleaved into: Non-structural protein NS3A]

1 entry

African horse sickness virus 5 (AHSV-5)

VNS3_AHSV5 Non-structural protein NS3 [Cleaved into: Non-structural protein NS3A]

1 entry

African horse sickness virus 7 (AHSV-7)

VNS3_AHSV7 Non-structural protein NS3 [Cleaved into: Non-structural protein NS3A]

1 entry

African horse sickness virus 8 (AHSV-8)

VNS3_AHSV8 Non-structural protein NS3 [Cleaved into: Non-structural protein NS3A]

1 entry

Bluetongue virus 1 (isolate South Africa vaccine) (BTV 1)

VP2_BTV1V Outer capsid protein VP2

1 entry

Bluetongue virus 10 (BTV 10)

VNS2_BTV1X Non-structural protein NS2

1 entry

Bluetongue virus 20 (isolate Australia) (BTV 20)

VNS1_BTV20 Non-structural protein NS1

1 entry

Bluetongue virus 3 (isolate South Africa vaccine) (BTV 3)

VP2_BTV3V Outer capsid protein VP2

1 entry

Epizootic hemorrhagic disease virus 2 (strain Australia) (EHDV-2)

VP3_EHDVA Core protein VP3
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Changuinola virus taxid:40052

Protein ModelArchive
Core protein VP4 ma-jd-viral-08662
Core protein VP7 ma-jd-viral-61449
Helicase ma-jd-viral-65175
Inner layer core protein ma-jd-viral-12631
Non-structural protein NS1 ma-jd-viral-30283
Non-structural protein NS2 ma-jd-viral-01682
Non-structural protein NS3 ma-jd-viral-00678
Outer capsid protein VP5 ma-jd-viral-34535

Chobar Gorge virus taxid:1679172

Protein ModelArchive
Core protein VP4 ma-jd-viral-08660
Core protein VP7 ma-jd-viral-61448
Helicase ma-jd-viral-65179
Inner core protein ma-jd-viral-12635
NS3 protein ma-jd-viral-00673
NS3a protein ma-jd-viral-00674
NS4 protein ma-jd-viral-40090
Non-structural protein NS2 ma-jd-viral-01670
Outer capsid protein ma-jd-viral-60696
Outer capsid protein VP5 ma-jd-viral-34540
RNA-directed RNA polymerase (EC 2.7.7.48) ma-jd-viral-19673
Tubule protein ma-jd-viral-30284

Fengkai orbivirus taxid:1692107

Protein ModelArchive
Core protein VP4 ma-jd-viral-08666
Core protein VP7 ma-jd-viral-61450
NS4 ma-jd-viral-65186
Non-structural protein NS1 ma-jd-viral-30290
Non-structural protein NS2 ma-jd-viral-01677
Nonstructural protein ma-jd-viral-00677
Outer capsid protein VP2 ma-jd-viral-60869
Outer capsid protein VP5 ma-jd-viral-34537
RNA-directed RNA polymerase (EC 2.7.7.48) ma-jd-viral-19672
Sub-core-shell protein ma-jd-viral-12629

Mobuck virus taxid:1408137

Protein ModelArchive
Core protein VP4 ma-jd-viral-08668
Core protein VP7 ma-jd-viral-61451
Non-structural protein NS1 ma-jd-viral-30291
Non-structural protein NS2 ma-jd-viral-01675
Nsp3 ma-jd-viral-00671
Outer capsid protein VP2 ma-jd-viral-55172
Outer capsid protein VP5 ma-jd-viral-34539
VP3 ma-jd-viral-12639
VP6 ma-jd-viral-65181

Umatilla virus taxid:40060

Protein ModelArchive
Core protein VP4 ma-jd-viral-08664
Core protein VP7 ma-jd-viral-61454
Helicase ma-jd-viral-65176
NS3 ma-jd-viral-00670
Non-structural protein NS1 ma-jd-viral-30292
Non-structural protein NS2 ma-jd-viral-01674
Outer capsid protein VP5 ma-jd-viral-34538
RNA-directed RNA polymerase (EC 2.7.7.48) ma-jd-viral-19675
Subcore shell T2 protein ma-jd-viral-12637
VP3 ma-jd-viral-52779

Wad Medani virus taxid:40067

Protein ModelArchive
Core protein VP4 ma-jd-viral-08661
Core protein VP7 ma-jd-viral-61452
Helicase ma-jd-viral-65178
Inner core protein ma-jd-viral-12630
NS3 protein ma-jd-viral-00681
NS3a protein ma-jd-viral-00680
NS4 protein ma-jd-viral-47480
Non-structural protein NS1 ma-jd-viral-30288
Non-structural protein NS2 ma-jd-viral-01671
Outer capsid protein ma-jd-viral-45138
Outer capsid protein VP5 ma-jd-viral-34541
RNA-directed RNA polymerase (EC 2.7.7.48) ma-jd-viral-19674

Wallal virus taxid:40061

Protein ModelArchive
Core protein VP4 ma-jd-viral-08663
Core protein VP7 ma-jd-viral-61447
Helicase ma-jd-viral-65182
Inner core ma-jd-viral-12632
NS3 ma-jd-viral-00676
Non-structural protein NS1 ma-jd-viral-30282
Non-structural protein NS2 ma-jd-viral-01680
Outer capsid protein VP2 ma-jd-viral-60868
Outer capsid protein VP5 ma-jd-viral-34542
RNA-directed RNA polymerase (EC 2.7.7.48) ma-jd-viral-19671