Ilarvirus

Molecular biology

VIRION

Non enveloped, T=3 icosahedral, 29 nm in diameter, composed of 180 coat proteins: 12 pentamers and 20 hexamers.

GENOME

Segmented, tripartite linear ssRNA(+) genome composed of RNA1, RNA2, RNA3. Each genomic segment has a 3’ tRNA-like structure and a 5’cap.

GENE EXPRESSION

Genomic RNA serves as messenger RNAs. RNA1 and RNA2 encode respectively proteins 1a and 2a, both involved in genome replication and internal transcription of sgRNA4 from the minus-strand copy of RNA3. RNA3 and sgRNA4 are translated respectively into movement and capsid proteins. ORF2b encodes a viral suppressor of RNA silencing.

REPLICATION

CYTOPLASMIC

  1. Virus attaches to host receptors.
  2. Uncoating, and release of the viral genomic RNA into the cytoplasm.
  3. Expression of protein 1a and 2a that promote the replication of genomic RNAs.
  4. Replication of viral RNA: a negative-sense complementary ssRNA is synthesized using the genomic RNA as a template.
  5. New genomic RNAs are synthesized using the negative-sense RNAs as templates.Subgenomic RNA4 is transcribed from RNA3 antigenome.
  6. Subgenomic RNA4 is translated producing capsid proteins.
  7. Assembly of new virions.
  8. Virions are released by lysis of the cell.

Matching UniProtKB/Swiss-Prot entries

5 entries grouped by strain

5 entries

Tobacco streak virus (strain WC) (TSV) reference strain

Select_all Deselect_all  
1A_TOBSVReplication protein 1a
2B_TOBSVProtein 2b
CAPSD_TOBSVCapsid protein (CP) (Coat protein)
MVP_TOBSVMovement protein (MP) (Protein 3A)
RDRP_TOBSVRNA-directed RNA polymerase 2a (2a pol) (EC 2.7.7.48) (2a polymerase)