Lipothrixviridae (taxid:10477)

VIRION

image

Enveloped, rod-shaped. The capsid is about 24-38 nm in diameter and 410-1950 nm in length.

GENOME

Linear dsDNA genome of 15.9 to 56 kb. Extremities of the DNA are modified in an unknown manner.

GENE EXPRESSION

The genome is organized in operons.

REPLICATION

CYTOPLASMIC

  1. Adsorption: the phage attaches to target cell
  2. Injection: viral DNA is injected in host cell cytoplasm
  3. Transcription and translation of early genes
  4. Replication of genomic DNA
  5. Transcription and translation of late genes
  6. Genomic DNA is packaged in new virions
  7. Mature virions are released from the cell
DB LINKS image image

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TAXONOMY Baltimore Group I: dsDNA viruses
Realm: Adnaviria
Class: Tokiviricetes
Order: Ligamenvirales
Family: Lipothrixviridae
Genus: Alphalipothrixvirus
Betalipothrixvirus
Gammalipothrixvirus
Deltalipothrixvirus
SPECIES
Acidianus filamentous virus 1
 Acidianus filamentous virus 2
 Sulfolobus islandicus filamentous virus
 Acidianus filamentous virus 3
 Acidianus filamentous virus 6
 Acidianus filamentous virus 7
 Acidianus filamentous virus 8
 Acidianus filamentous virus 9
REFERENCE STRAINS Sulfolobus islandicus filamentous virus
Sequence | Genome assembly | Proteome
Acidianus filamentous virus 1
Sequence | Genome assembly | Proteome Acidianus filamentous virus 2
Sequence | Genome assembly | Proteome
ETYMOLOGY Lipothrix: from Greek, "fat hair". Referring the virion shape.

Host

NATURAL HOSTS Archaea

Ecology and disease

GEOGRAPHY Iceland
Yellowstone national park (USA)
Italy
TRANSMISSION Passive diffusion through medium
ANTIVIRAL DRUGS

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

127 entries grouped by strain

73 entries

Sulfolobus islandicus filamentous virus (isolate Iceland/Hveragerdi) (SIFV) reference strain

Select_allDeselect_all
CAPS1_SIFVH Major capsid protein 1 (MCP1)

pdb 6WQ2

CAPS2_SIFVH Major capsid protein 2 (MCP2)

pdb 6WQ2

Y022_SIFVH Putative helicase 22 (EC 3.6.4.-)
Y007_SIFVH Putative helicase 7 (EC 3.6.4.-)
Y075_SIFVH Uncharacterized protein 75
Y074_SIFVH Putative transmembrane protein 74
Y073_SIFVH Uncharacterized protein 73
Y072_SIFVH Uncharacterized protein 72
Y071_SIFVH Uncharacterized protein 71
Y070_SIFVH Uncharacterized protein 70
Y069_SIFVH Uncharacterized protein 69
Y068_SIFVH Uncharacterized protein 68
Y067_SIFVH Uncharacterized protein 67
Y066_SIFVH Uncharacterized protein 66
Y065_SIFVH Uncharacterized protein 65
Y064_SIFVH Uncharacterized protein 64
GT063_SIFVH Putative glycosyltransferase 63 (EC 2.4.-.-)
Y062_SIFVH Uncharacterized protein 62
Y061_SIFVH Uncharacterized protein 61
Y060_SIFVH Uncharacterized protein 60
Y059_SIFVH Uncharacterized protein 59
Y058_SIFVH Uncharacterized protein 58
Y057_SIFVH Putative transmembrane protein 57
Y056_SIFVH Uncharacterized protein 56
Y055_SIFVH Uncharacterized protein 55
Y054_SIFVH Uncharacterized protein 54
Y053_SIFVH Uncharacterized protein 53
Y052_SIFVH Uncharacterized protein 52
Y051_SIFVH Uncharacterized protein 51
Y050_SIFVH Uncharacterized protein 50
Y049_SIFVH Putative transmembrane protein 49
GT048_SIFVH Putative glycosyltransferase 48 (EC 2.4.-.-)
Y047_SIFVH Uncharacterized protein 47
Y046_SIFVH Uncharacterized protein 46
GT045_SIFVH Putative glycosyltransferase 45 (EC 2.4.-.-)
Y044_SIFVH Uncharacterized protein 44
Y043_SIFVH Uncharacterized protein 43
GT041_SIFVH Putative glycosyltransferase 41 (EC 2.4.-.-)
Y040_SIFVH Uncharacterized protein 40
Y038_SIFVH Uncharacterized protein 38
Y037_SIFVH Uncharacterized protein 37
Y034_SIFVH Uncharacterized protein 34
Y033_SIFVH Uncharacterized protein 33
Y032_SIFVH Uncharacterized protein 32
Y031_SIFVH Uncharacterized protein 31
Y030_SIFVH Uncharacterized protein 30
Y029_SIFVH Uncharacterized protein 29
Y028_SIFVH Uncharacterized protein 28
Y027_SIFVH Uncharacterized protein 27
Y026_SIFVH Uncharacterized protein 26
Y025_SIFVH Uncharacterized protein 25
Y024_SIFVH Uncharacterized protein 24
Y023_SIFVH Uncharacterized protein 23
Y021_SIFVH Uncharacterized protein 21
Y020_SIFVH Uncharacterized protein 20
Y019_SIFVH Uncharacterized protein 19
Y018_SIFVH Uncharacterized protein 18
Y017_SIFVH Uncharacterized protein 17
Y016_SIFVH Uncharacterized protein 16
Y015_SIFVH Uncharacterized protein 15
Y014_SIFVH Uncharacterized protein 14

pdb 2H36

Y013_SIFVH Uncharacterized protein 13
Y012_SIFVH Uncharacterized protein 12
Y011_SIFVH Uncharacterized protein 11
Y010_SIFVH Putative transmembrane protein 10
Y009_SIFVH Uncharacterized protein 9
Y008_SIFVH Uncharacterized protein 8
Y006_SIFVH Uncharacterized protein 6
Y005_SIFVH Uncharacterized protein 5
Y004_SIFVH Uncharacterized protein 4
Y003_SIFVH Uncharacterized protein 3
Y002_SIFVH Uncharacterized protein 2
Y001_SIFVH Uncharacterized protein 1

52 entries

Acidianus filamentous virus 2 (isolate Italy/Pozzuoli) (AFV-2) reference strain

Select_allDeselect_all
Y065_AFV2P Uncharacterized protein ORF65
Y286B_AFV2P Uncharacterized protein ORF286b
Y116_AFV2P Uncharacterized protein ORF116
Y202_AFV2P Putative transmembrane protein ORF202
Y208_AFV2P Uncharacterized protein ORF208
Y107A_AFV2P Uncharacterized protein ORF107a
Y146_AFV2P Uncharacterized protein ORF146
Y162_AFV2P Uncharacterized protein ORF162
Y254_AFV2P Uncharacterized protein ORF254
Y286A_AFV2P Uncharacterized protein ORF286a
Y289_AFV2P Putative transmembrane protein ORF289
Y246_AFV2P Uncharacterized protein ORF246
Y093_AFV2P Uncharacterized protein ORF93
Y147_AFV2P Uncharacterized protein ORF147
Y090_AFV2P Uncharacterized protein ORF90
Y258_AFV2P Uncharacterized protein ORF258
Y413_AFV2P Uncharacterized protein ORF413
Y338_AFV2P Uncharacterized protein ORF338
Y554_AFV2P Uncharacterized protein ORF554
GT330_AFV2P Putative glycosyltransferase ORF330 (EC 2.4.-.-)
Y238_AFV2P Uncharacterized protein ORF238
Y217A_AFV2P Uncharacterized protein ORF217a
Y180_AFV2P Uncharacterized protein ORF180
Y159_AFV2P Putative transmembrane protein ORF159
Y061_AFV2P Uncharacterized protein ORF61
Y115_AFV2P Uncharacterized protein ORF115
Y100A_AFV2P Uncharacterized protein ORF100a
Y046_AFV2P Uncharacterized protein ORF46
Y107_AFV2P Uncharacterized protein ORF107
Y067A_AFV2P Uncharacterized protein ORF67a
GT378_AFV2P Putative glycosyltransferase ORF378 (EC 2.4.-.-)
Y217B_AFV2P Uncharacterized protein ORF217b
Y113_AFV2P Uncharacterized protein ORF113
Y066_AFV2P Putative transmembrane protein ORF66
Y083_AFV2P Uncharacterized protein ORF83
Y067B_AFV2P Uncharacterized protein ORF67b
Y072_AFV2P Uncharacterized protein ORF72
Y425_AFV2P Uncharacterized protein ORF425
Y181_AFV2P Uncharacterized protein ORF181
Y048_AFV2P Uncharacterized protein ORF48
Y121_AFV2P Uncharacterized protein ORF121
Y108_AFV2P Uncharacterized protein ORF108
Y178_AFV2P Uncharacterized protein ORF178
Y142_AFV2P Uncharacterized protein ORF142
Y104B_AFV2P Putative zinc finger protein ORF104b
Y085_AFV2P Uncharacterized protein ORF85
Y062_AFV2P Uncharacterized protein ORF62
Y104A_AFV2P Uncharacterized protein ORF104a
Y100B_AFV2P Uncharacterized protein ORF100b
Y122_AFV2P Uncharacterized protein ORF122
Y345_AFV2P Uncharacterized protein ORF345
Y119_AFV2P Uncharacterized protein ORF119

2 entries

Sulfolobus filamentous virus 1 (SFV1) (Sulfolobus virus SFV-1) reference strain

Select_allDeselect_all
CAPS1_SUFV1 Major capsid protein VP4
CAPS2_SUFV1 Major capsid protein VP5

pdb 6D5F