L5-like viruses

Molecular biology

VIRION


Nonenveloped, head-tail structure. The head is about 60 nm in diameter and consists of 72 capsomers. Tails are flexible with a single short fiber.

GENOME

Linear, dsDNA genome of about 52 kb, containing about 80 genes.

GENE EXPRESSION

REPLICATION

CYTOPLASMIC

  1. Adsorption: the phage attaches to target cell trhough its tail fibers.
  2. Viral lysozyme degrades cell wall locally
  3. Injection: viral DNA is injected in host cell periplasm
  4. DNA genome is circularized or integrated into host chromosome
  5. Transcription and traduction of early genes
  6. Replication of genomic DNA
  7. Transcription and traduction of late genes
  8. Assembly of new virions in host cell cytoplasm
  9. Mature virions are released from the cell by lysis
DB LINKS

Nucleotide DB: NCBI
Protein DB: UniProtKB

TAXONOMY Group I: dsDNA viruses
Order: Caudovirales
Family: Siphoviridae
Genus: L5-like virus
SPECIES
Type: Mycobacterium phage L5 (L5)
Main: Mycobacterium phage D29 (D29)
REFERENCE STRAIN Mycobacterium phage L5
Sequence | Genome | Proteome
HOST Bacteria.

Epidemiology

GEOGRAPHY Worldwide
TRANSMISSION Passive diffusion through medium
ANTIVIRAL DRUGS None

Matching UniProtKB/Swiss-Prot entries

153 entries grouped by strain

All proteins are shown (view only 85 complete proteome entries)

85 entries

Mycobacterium phage L5 (Mycobacteriophage L5) reference strain

Select_all Deselect_all  
DPOL_BPML5DNA polymerase (EC 2.7.7.7)
THYX_BPML5Probable thymidylate synthase (TS) (TSase) (EC 2.1.1.148) (Gp48)
VG01_BPML5Gene 1 protein (Gp1)
VG02_BPML5Gene 2 protein (Gp2)
VG03_BPML5Gene 3 protein (Gp3)
VG04_BPML5Gene 4 protein (Gp4)
VG05_BPML5Gene 5 protein (Gp5)
VG06_BPML5Minor tail protein Gp6
VG10_BPML5Gene 10 protein (Gp10)
VG11_BPML5Gene 11 protein (Gp11)
VG12_BPML5Gene 12 protein (Gp12)
VG13_BPML5Gene 13 protein (Gp13)
VG14_BPML5Gene 14 protein (Gp14)
VG15_BPML5Gene 15 protein (Gp15)
VG16_BPML5Probable head assembly protein (Gp16) (Scaffold protein)
VG17_BPML5Major head protein Gp17
VG18_BPML5Gene 18 protein (Gp18)
VG19_BPML5Gene 19 protein (Gp19)
VG20_BPML5Gene 20 protein (Gp20)
VG21_BPML5Gene 21 protein (Gp21)
VG22_BPML5Gene 22 protein (Gp22)
VG23_BPML5Major tail protein Gp23 (Major coat protein)
VG24_BPML5Gene 24 protein (Gp24)
VG25_BPML5Gene 25 protein (Gp25)
VG26_BPML5Minor tail protein Gp26
VG27_BPML5Minor tail protein Gp27
VG28_BPML5Minor tail protein Gp28
VG29_BPML5Gene 29 protein (Gp29)
VG30_BPML5Gene 30 protein (Gp30)
VG31_BPML5Gene 31 protein (Gp31)
VG32_BPML5Gene 32 protein (Gp32)
VG35_BPML5Gene 35 protein (Gp35)
VG36_BPML5Gene 36 protein (Gp36)
VG37_BPML5Gene 37 protein (Gp37)
VG38_BPML5Gene 38 protein (Gp38)
VG39_BPML5Gene 39 protein (Gp39)
VG40_BPML5Gene 40 protein (Gp40)
VG41_BPML5Gene 41 protein (Gp41)
VG42_BPML5Gene 42 protein (Gp42)
VG43_BPML5Gene 43 protein (Gp43)
VG45_BPML5Gene 45 protein (Gp45)
VG46_BPML5Gene 46 protein (Gp46)
VG47_BPML5Gene 47 protein (Gp47)
VG49_BPML5Gene 49 protein (Gp49)
VG50_BPML5Putative adenosylcobalamin-dependent ribonucleoside-triphosphate reductase (EC ...
VG51_BPML5Gene 51 protein (Gp51)
VG52_BPML5Gene 52 protein (Gp52)
VG53_BPML5Gene 53 protein (Gp53)
VG54_BPML5Gene 54 protein (Gp54)
VG55_BPML5Gene 55 protein (Gp55)
VG56_BPML5Gene 56 protein (Gp56)
VG57_BPML5Gene 57 protein (Gp57)
VG58_BPML5Gene 58 protein (Gp58)
VG59_BPML5Gene 59 protein (Gp59)
VG60_BPML5Gene 60 protein (Gp60)
VG61_BPML5Gene 61 protein (Gp61)
VG62_BPML5Gene 62 protein (Gp62)
VG63_BPML5Gene 63 protein (Gp63)
VG64_BPML5Gene 64 protein (Gp64)
VG65_BPML5Gene 65 protein (Gp65)
VG66_BPML5Gene 66 protein (Gp66)
VG67_BPML5Gene 67 protein (Gp67)
VG68_BPML5Gene 68 protein (Gp68)
VG69_BPML5Gene 69 protein (Gp69)
VG70_BPML5Gene 70 protein (Gp70)
VG71_BPML5Repressor-like immunity protein (Gp71)

pdb 1Z0L 

VG72_BPML5Gene 72 protein (Gp72)
VG73_BPML5Gene 73 protein (Gp73)
VG74_BPML5Gene 74 protein (Gp74)
VG75_BPML5Gene 75 protein (Gp75)
VG76_BPML5Gene 76 protein (Gp76)
VG77_BPML5Gene 77 protein (Gp77)
VG78_BPML5Gene 78 protein (Gp78)
VG79_BPML5Gene 79 protein (Gp79)
VG80_BPML5Gene 80 protein (Gp80)
VG81_BPML5Gene 81 protein (Gp81)
VG82_BPML5Gene 82 protein (Gp82)
VG83_BPML5Gene 83 protein (Gp83)
VG84_BPML5Gene 84 protein (Gp84)
VG85_BPML5Gene 85 protein (Gp85)
VG86_BPML5Gene 86 protein (Gp86)
VG87_BPML5Gene 87 protein (Gp87)
VG88_BPML5Gene 88 protein (Gp88)
VINT_BPML5Integrase
VXIS_BPML5Excisionase (Excisase) (Gp34)

68 entries

Mycobacterium phage D29 (Mycobacteriophage D29)

Select_all Deselect_all  
DCTD_BPMD2Deoxycytidylate deaminase (EC 3.5.4.12) (dCMP deaminase)
DPOL_BPMD2DNA polymerase (EC 2.7.7.7)
PRXH_BPMD2Putative non-heme haloperoxidase (EC 1.11.1.-)
THYX_BPMD2Probable thymidylate synthase (TS) (TSase) (EC 2.1.1.148) (Gp48)
VG01_BPMD2Gene 1 protein (Gp1)
VG02_BPMD2Gene 2 protein (Gp2)
VG03_BPMD2Gene 3 protein (Gp3)
VG04_BPMD2Gene 4 protein (Gp4)
VG05_BPMD2Gene 5 protein (Gp5)
VG06_BPMD2Minor tail protein Gp6
VG10_BPMD2Gene 10 protein (Gp10)
VG11_BPMD2Gene 11 protein (Gp11)
VG12_BPMD2Gene 12 protein (Gp12)

pdb 3HC7 

VG13_BPMD2Gene 13 protein (Gp13)
VG14_BPMD2Gene 14 protein (Gp14)
VG15_BPMD2Gene 15 protein (Gp15)
VG16_BPMD2Probable head assembly protein (Gp16) (Scaffold protein)
VG17_BPMD2Major head protein Gp17
VG18_BPMD2Gene 18 protein (Gp18)
VG19_BPMD2Gene 19 protein (Gp19)
VG20_BPMD2Gene 20 protein (Gp20)
VG21_BPMD2Gene 21 protein (Gp21)
VG22_BPMD2Gene 22 protein (Gp22)
VG23_BPMD2Major tail protein Gp23 (Major coat protein)
VG24_BPMD2Gene 24 protein (Gp24)
VG25_BPMD2Gene 25 protein (Gp25)
VG26_BPMD2Minor tail protein Gp26
VG27_BPMD2Minor tail protein Gp27
VG28_BPMD2Minor tail protein Gp28
VG29_BPMD2Gene 29 protein (Gp29)
VG30_BPMD2Gene 30 protein (Gp30)
VG31_BPMD2Gene 31 protein (Gp31)
VG32_BPMD2Gene 32 protein (Gp32)
VG341_BPMD2Gene 34.1 protein (Gp34.1)
VG36_BPMD2Gene 36 protein (Gp36)
VG38_BPMD2Gene 38 protein (Gp38)
VG39_BPMD2Gene 39 protein (Gp39)
VG41_BPMD2Gene 41 protein (Gp41)
VG42_BPMD2Gene 42 protein (Gp42)
VG441_BPMD2Gene 44.1 protein (Gp44.1)
VG46_BPMD2Gene 46 protein (Gp46)
VG49_BPMD2Gene 49 protein (Gp49)
VG50_BPMD2Putative adenosylcobalamin-dependent ribonucleoside-triphosphate reductase (EC ...
VG51_BPMD2Gene 51 protein (Gp51)
VG52_BPMD2Gene 52 protein (Gp52)
VG53_BPMD2Gene 53 protein (Gp53)
VG54_BPMD2Gene 54 protein (Gp54)
VG55_BPMD2Gene 55 protein (Gp55)
VG56_BPMD2Gene 56 protein (Gp56)
VG57_BPMD2Gene 57 protein (Gp57)
VG58_BPMD2Gene 58 protein (Gp58)
VG59_BPMD2Gene 59 protein (Gp59)
VG61_BPMD2Gene 61 protein (Gp61)
VG62_BPMD2Gene 62 protein (Gp62)
VG63_BPMD2Gene 63 protein (Gp63)
VG64_BPMD2Gene 64 protein (Gp64)
VG65_BPMD2Gene 65 protein (Gp65)
VG66_BPMD2Gene 66 protein (Gp66)
VG68_BPMD2Gene 68 protein (Gp68)
VG69_BPMD2Gene 69 protein (Gp69)
VG70_BPMD2Gene 70 protein (Gp70)
VG84_BPMD2Gene 84 protein (Gp84)
VG86_BPMD2Gene 86 protein (Gp86)
VG87_BPMD2Gene 87 protein (Gp87)
VG88_BPMD2Gene 88 protein (Gp88)
VG89_BPMD2Gene 89 protein (Gp89)
VINT_BPMD2Integrase
VXIS_BPMD2Excisionase (Excisase) (Gp34)
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