Macavirus

Molecular biology

VIRION

Enveloped, spherical to pleomorphic, 150-200 nm in diameter, T=16 icosahedral symmetry. Capsid consists of 162 capsomers and is surrounded by an amorphous tegument. Glycoproteins complexes are embeded in the lipid envelope.

GENOME

Monopartite, linear, dsDNA genome of about 180 kb. The genome contains terminal and internal reiterated sequences.

GENE EXPRESSION

Each viral transcript usually encodes a single protein and has a promoter/regulatory sequence, a TATA box, a transcription initiation site, a 5’ leader sequence of 30-300 bp (not translated), a 3’ nontranslated sequence of 10-30 bp, and a poly A signal. There are many gene overlaps. There are only few spliced genes. Some of the expressed ORFs are antisense to each other. Some ORFs can be accessed from more than one promoter. There are some non-coding genes.

REPLICATION

NUCLEAR

Lytic replication:

  1. Virus attaches to the host receptors.
  2. Fusion with the plasma membrane to release the core and the tegument proteins into the host cytoplasm.
  3. The capsid is transported to the nuclear pore where the viral DNA is released into the nucleus.
  4. Transcription of immediate early genes which promote transcription of early genes.
  5. Transcription of early viral mRNA by host polymerase II, transport into the cytoplasm and translation into early proteins.
  6. Early proteins are involved in replication of the viral DNA and are transported back into the nucleus.
  7. Synthesis of multiple copies of viral DNA by the viral DNA-dependent DNA polymerase.
  8. Transcription of late mRNAs by host polymerase II, transport into the cytoplasm and translation into late proteins.
  9. Late proteins are structural or core proteins and are transported back into the nucleus.
  10. Assembly of the virus and budding through the inner lamella of the nuclear membrane which has been modified by the insertion of herpes glycoproteins, throughout the Golgi and final release at the plasma membrane.

Latent replication : replication of circular viral episome in tandem with the host cell DNA using the host cell replication machinery.

Matching UniProtKB/Swiss-Prot entries

71 entries grouped by strain

All proteins are shown (view only 70 complete proteome entries)

70 entries

Alcelaphine herpesvirus 1 (strain C500) (AIHV-1) (Malignant catarrhal fever virus) reference strain

Select_all Deselect_all  
AN_ALHV1Alkaline nuclease 37 (EC 3.1.-.-)
BRLF1_ALHV1Putative transcription activator BRLF1 homolog
DNBI_ALHV1Major DNA-binding protein
DPOL_ALHV1DNA polymerase catalytic subunit (EC 2.7.7.7)
DUT_ALHV1Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (EC 3.6.1.23) (dUTP ...
GB_ALHV1Envelope glycoprotein B (gB)
GH_ALHV1Glycoprotein H
GL_ALHV1Envelope glycoprotein L (gL)
GM_ALHV1Envelope glycoprotein M (gM)
GN_ALHV1Glycoprotein N (gN)
HELI_ALHV1Probable ATP-dependent helicase 44 (EC 3.6.4.-)
IE63_ALHV1Immediate-early phosphoprotein 57
KITH_ALHV1Thymidine kinase (EC 2.7.1.21)
MCP_ALHV1Major capsid protein (MCP)
PORTL_ALHV1Portal protein 43
PRR_ALHV1Protease precursor (pPR) (Capsid protein 17)
RIR1_ALHV1Ribonucleoside-diphosphate reductase large subunit (EC 1.17.4.1) ...
RIR2_ALHV1Ribonucleoside-diphosphate reductase small chain (EC 1.17.4.1) (Ribonucleotide ...
SEMA_ALHV1Semaphorin-like protein A3
TEGU_ALHV1Probable large tegument protein
TRM1_ALHV1Tripartite terminase subunit UL28 homolog
TRM2_ALHV1Tripartite terminase subunit UL33 homolog
TRM3_ALHV1Tripartite terminase subunit UL15 homolog (DNA-packaging protein 29) (Terminase ...
UL07_ALHV1Gene 42 protein
UL16_ALHV1Capsid-binding protein 33 (Gene 33 protein)
UL17_ALHV1Virion-packaging protein 32
UL24_ALHV1Gene 20 protein
UL25_ALHV1Virion-packaging protein 19
UL31_ALHV1Virion egress protein 69 (Primary envelopment factor 69)
UL32_ALHV1Packaging protein 68
UL34_ALHV1Virion egress protein 67 (Primary envelopment factor 67)
UL37_ALHV1Capsid assembly protein 63
UL49_ALHV1Uncharacterized gene 66 protein
UL52_ALHV1Helicase/primase complex protein (Probable DNA replication gene 56 protein)
UL71_ALHV1BSRF1-like protein (Uncharacterized gene 55 protein)
UL79_ALHV1Gene 18 protein
UL87_ALHV1Uncharacterized gene 24 protein
UL91_ALHV1Uncharacterized gene 30 protein
UL92_ALHV1Gene 31 protein
UL95_ALHV1Gene 34 protein
UL96_ALHV1Gene 35 protein
UNG_ALHV1Uracil-DNA glycosylase (EC 3.2.2.27)
VG10_ALHV1Uncharacterized gene 10 protein
VG11_ALHV1Uncharacterized gene 11 protein
VG23_ALHV1Uncharacterized gene 23 protein
VG27_ALHV1Uncharacterized gene 27 protein
VG36_ALHV1Putative tyrosine kinase 36 (EC 2.7.10.2)
VG38_ALHV1Uncharacterized gene 38 protein
VG40_ALHV1Uncharacterized gene 40 protein
VG41_ALHV1Uncharacterized gene 41 protein
VG45_ALHV1Uncharacterized gene 45 protein
VG48_ALHV1Uncharacterized gene 48 protein
VG52_ALHV1Uncharacterized gene 52 protein
VG58_ALHV1Gene 58 protein
VG59_ALHV1DNA polymerase processivity factor
VG73_ALHV1Uncharacterized gene 73 protein
VGA10_ALHV1Uncharacterized gene A10 protein
VGA1_ALHV1Uncharacterized gene A1 protein
VGA2_ALHV1Uncharacterized protein A2
VGA4_ALHV1Uncharacterized gene A4 protein
VGA5_ALHV1G-protein coupled receptor A5
VGA6_ALHV1Uncharacterized gene A6 protein
VGA7_ALHV1Putative C-type lectin protein A7
VGA8_ALHV1Uncharacterized gene A8 protein
VGA9_ALHV1Putative apoptosis regulator A9
VP03_ALHV1Probable tegument protein antigen 3
VP19_ALHV1Triplex capsid protein 62
VP23_ALHV1Capsid protein VP23
VP65_ALHV1Capsid protein VP65
VP75_ALHV1Probable membrane antigen 75 (Tegument protein)

1 entry

Alcelaphine herpesvirus type 1 (strain WC11) (AHV-1) (Malignant catarrhal fever virus)


KITH_AHV1WThymidine kinase (EC 2.7.1.21)