Comovirinae (taxid:675075)

VIRION

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Non-enveloped, 28-30 nm in diameter, pseudo T=3 icosahedral capsid. Genome segments are encapsidated separately into two different types of particle similar in size.
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GENOME

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Segmented, bipartite linear ssRNA(+) genome composed of RNA-1=6-8 kb and RNA-2=4-7 kb. Each genomic segment has a VPg linked to its 5'end and a 3' poly(A) tract.

GENE EXPRESSION

The virion RNA is infectious and serves as both the genome and mRNA.
RNA-1 and RNA-2 are translated into two polyproteins, which are then processed into functional proteins. RNA-1 encodes proteins necessary for replication, while RNA-2 encodes one or two capsid proteins and product(s) involved in cell-to-cell movement.

ENZYMES

REPLICATION

CYTOPLASMIC

  1. Virus penetrates into the cell.
  2. Uncoating, and release of the viral genomic RNA into the cytoplasm.
  3. Synthesis and proteolytic cleavage of the replicase polyprotein RNA-1.
  4. Replication occurs in viral factories made of membrane vesicles derived from the ER. A dsRNA genome is synthesized from the genomic ssRNA(+).
  5. The dsRNA genome is transcribed/replicated thereby providing viral mRNAs/new ssRNA(+) genomes.
  6. Assembly of new virus particles.
  7. Movement protein allows cell-to-cell movement.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

43 entries grouped by strain

4 entries

Tomato ringspot virus (isolate raspberry) (ToRSV) reference strain

Select_allDeselect_all
POL1_TORVR RNA1 polyprotein (P1) [Cleaved into: Protein X1; Protein X2; Putative ATP-dependent helicase (EC ...
POL2_TORVR RNA2 polyprotein (P2) [Cleaved into: Protein X3; Protein X4; Movement protein (MP); Coat protein ...
YR21_TORVR Uncharacterized protein in RNA2
YR22_TORVR Uncharacterized protein in RNA2

2 entries

Broad bean wilt virus 1 (strain Spinach/United States/ATCC PV-132/1963) (BBWV-1) reference strain

Select_allDeselect_all
POL1_BBWVS RNA1 polyprotein (Genome polyprotein B) [Cleaved into: Protease cofactor; Putative helicase (EC ...
POL2_BBWVS RNA2 polyprotein (119kDa protein) (Genome polyprotein M) [Cleaved into: VP53 (53 kDa protein); ...

2 entries

Cowpea mosaic virus (strain SB) (CPMV) reference strain

Select_allDeselect_all
POL2_CPMVS RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...
POL1_CPMVS RNA1 polyprotein (B RNA polyprotein) (Bottom component polyprotein) (Genome polyprotein B) (P1) ...

3 entries

Beet ringspot virus (BRSV) (Tomato black ring virus (strain S))

Select_allDeselect_all
POL1_BRSV RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent ...
POL2_BRSV RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein ...
VS48_BRSV Satellite RNA 48 kDa protein

3 entries

Grapevine fanleaf virus (GFLV)

Select_allDeselect_all
POL2_GFLV RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein ...
POL1_GFLV RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent ...
VP3_GFLV Protein P3

3 entries

Tobacco ringspot virus (TobRV) (TRSV)

Select_allDeselect_all
POL1_TRSV RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent ...
POL2_TRSV RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein ...
CAPSD_TRSV Capsid protein (Coat protein)

2 entries

Arabis mosaic virus (isolate NW) (ArMV)

Select_allDeselect_all
POL1_ARMVN RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent ...
POL2_ARMVN RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein ...

2 entries

Bean-pod mottle virus (strain Kentucky G7) (BPMV)

Select_allDeselect_all
POL2_BPMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...
POL1_BPMV RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); ...

2 entries

Blackcurrant reversion association virus (BRAV)

Select_allDeselect_all
POL1_BRAV RNA1 polyprotein (P1) [Cleaved into: Protein X1; Protein X2; Putative ATP-dependent helicase (EC ...
POL2_BRAV RNA2 polyprotein (P2) [Cleaved into: Protein 2A; Movement protein (MP); Coat protein (CP)]

2 entries

Broad bean wilt virus 2 (BBWV-2)

Select_allDeselect_all
POL2_BBWV2 RNA2 polyprotein (119kDa protein) (Genome polyprotein M) [Cleaved into: VP53 (53 kDa protein); ...
POL1_BBWV2 RNA1 polyprotein (Genome polyprotein B) [Cleaved into: Protease cofactor; Putative helicase (EC ...

2 entries

Cowpea severe mosaic virus (strain DG) (CPSMV)

Select_allDeselect_all
POL2_CPSMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...
POL1_CPSMV RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); ...

2 entries

Cycas necrotic stunt virus (CNSV)

Select_allDeselect_all
POL1_CNSV RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent ...
POL2_CNSV RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein ...

2 entries

Grapevine chrome mosaic virus (GCMV) (Hungarian grapevine chrome mosaic virus)

Select_allDeselect_all
POL1_GCMV RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent ...
POL2_GCMV RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein ...

2 entries

Raspberry ringspot virus (strain cherry) (RpRSV)

Select_allDeselect_all
POL1_RRVC RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (Protease cofactor); Putative ATP-dependent ...
POL2_RRVC RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein ...

2 entries

Red clover mottle virus (RCMV)

Select_allDeselect_all
POL2_RCMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...
POL1_RCMV RNA1 polyprotein (Genome polyprotein B) (P1) [Cleaved into: Protease cofactor (32 kDa protein); ...

1 entry

Andean potato mottle virus (APMV)

POL2_APMV RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Arabis mosaic virus (isolate Syrah) (ArMV)

POL2_ARMVS RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein ...

1 entry

Grapevine fanleaf virus (isolate NW) (GFLV)

POL2_GFLVN RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein ...

1 entry

Raspberry ringspot virus (strain S) (RpRSV)

POL2_RRVS RNA2 polyprotein (P2) [Cleaved into: Protein 2A (P2A); Movement protein (2B-MP); Coat protein ...

1 entry

Squash mosaic virus (strain melon) (SqMV)

POL2_SQMVM RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein) (P2) ...

1 entry

Tomato black ring virus (strain E) (TBRV)

VS48_TBRVE Satellite RNA 48 kDa protein

1 entry

Tomato black ring virus (strain L) (TBRV)

VS48_TBRVL Satellite RNA 48 kDa protein

1 entry

Tomato black ring virus (strain MJ) (TBRV)

POL1_TBRVM RNA1 polyprotein (P1) [Cleaved into: P1A protein (1A) (protease cofactor); Putative ATP-dependent ...
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Bean rugose mosaic virus taxid:128790

Protein ModelArchive
RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein)... ma-jd-viral-08198

Petunia chlorotic mottle virus taxid:1935922

Protein ModelArchive
Polyprotein ma-jd-viral-08197

Potato black ringspot virus taxid:257464

Protein ModelArchive
RNA 2 polyprotein ma-jd-viral-08194

Soybean latent spherical virus taxid:1927714

Protein ModelArchive
Polyprotein ma-jd-viral-08193