T=4 icosahedral capsid protein (kw:KW-1144)

The capsid is composed 60 asymmetric units made of 4 proteins (T=4), for a total of 240 capsid proteins.

Icosahedric triangulation number is calculated following Caspar and Klug system

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

101 entries grouped by protein

reorder by strain

58 entries

Capsid protein (Core antigen) (Core protein) (HBcAg) (p21.5)

CAPSD_DHBVQ

Duck hepatitis B virus (isolate Shanghai/DHBVQCA34) (DHBV) reference strain

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_GSHV

Ground squirrel hepatitis virus (strain 27) (GSHV) reference strain

CAPSD_HASV

Helicoverpa armigera stunt virus (HaSV) reference strain

Capsid protein (CP) (Coat protein)

3S6P

CAPSD_HBVCJ

Hepatitis B virus genotype C subtype ayr (isolate Human/Japan/Okamoto/-) (HBV-C) reference strain

5E00; 7ABL

CAPSD_HBVD3

Hepatitis B virus genotype D subtype ayw (isolate France/Tiollais/1979) (HBV-D) reference strain

6HTX; 6HU4; 6HU7; 7OCO; 7OCW; 7OD4; 7OD6; 7OD7; 7OD8; 7OEN; 7OEV; 7OEW; 7PZ9; 7PZI; 7PZK; 7PZL; 7PZM; 7PZN

CAPSD_NCBVS

Nudaurelia capensis beta virus (isolate Pine emperor moth/South Africa) (NbetaV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_WHV3

Woodchuck hepatitis B virus (isolate 59) (WHV) reference strain

CAPSD_WHV5

Woodchuck hepatitis B virus (isolate 8) (WHV) reference strain

CAPSD_ASHV

Arctic squirrel hepatitis virus (ASHV)

CAPSD_DHBV1

Duck hepatitis B virus (strain United States/DHBV-16) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

6YGH; 6YGI

CAPSD_DHBV3

Duck hepatitis B virus (strain Germany/DHBV-3) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HBVA2

Hepatitis B virus genotype A2 subtype adw (isolate Japan/Nishioka/1983) (HBV-A)

3J2V; 6UI6; 6UI7

CAPSD_HBVA3

Hepatitis B virus genotype A2 subtype adw2 (strain Rutter 1979) (HBV-A)

CAPSD_HBVA4

Hepatitis B virus genotype A2 subtype adw2 (isolate Germany/991/1990) (HBV-A)

CAPSD_HBVA5

Hepatitis B virus genotype A1 subtype adw (isolate Philippines/pFDW294/1988) (HBV-A)

CAPSD_HBVA6

Hepatitis B virus genotype A1 subtype adw2 (isolate South Africa/84/2001) (HBV-A)

CAPSD_HBVA7

Hepatitis B virus genotype A2 (isolate Japan/11D11HCCW/1998) (HBV-A)

CAPSD_HBVA8

Hepatitis B virus genotype A3 (isolate Cameroon/CMR983/1994) (HBV-A)

CAPSD_HBVA9

Hepatitis B virus genotype A3 (isolate Cameroon/CMR711/1994) (HBV-A)

CAPSD_HBVB1

Hepatitis B virus genotype B1 subtype adw (isolate Japan/pJDW233/1988) (HBV-B)

CAPSD_HBVB2

Hepatitis B virus genotype B2 (isolate Indonesia/pIDW420/1988) (HBV-B)

CAPSD_HBVB3

Hepatitis B virus genotype B2 (isolate Vietnam/9873/1997) (HBV-B)

CAPSD_HBVB4

Hepatitis B virus genotype B/C subtype adw (isolate Okinawa/pODW282/1998) (HBV-B)

CAPSD_HBVB6

Hepatitis B virus genotype B2 subtype adw (isolate China/patient4/1996) (HBV-B)

CAPSD_HBVB7

Hepatitis B virus genotype B1 (isolate Japan/Yamagata-2/1998) (HBV-B)

CAPSD_HBVB8

Hepatitis B virus genotype B1 (isolate Japan/Ry30/2002) (HBV-B)

CAPSD_HBVC0

Hepatitis B virus genotype C (isolate Vietnam/3270/2000) (HBV-C)

CAPSD_HBVC1

Hepatitis B virus genotype C subtype adr (isolate Japan/Nishioka/1983) (HBV-C)

CAPSD_HBVC2

Hepatitis B virus genotype C subtype ar (isolate Japan/S-207/1988) (HBV-C)

CAPSD_HBVC3

Hepatitis B virus genotype C subtype adr (strain Japan/adr4/1983) (HBV-C)

CAPSD_HBVC4

Hepatitis B virus genotype C subtype adr (isolate Korea/Kim/1989) (HBV-C)

CAPSD_HBVC5

Hepatitis B virus genotype C subtype ad (isolate Japan/S-179/1988) (HBV-C)

CAPSD_HBVC7

Hepatitis B virus genotype C subtype ayw (isolate China/Tibet127/2002) (HBV-C)

CAPSD_HBVC8

Hepatitis B virus genotype C subtype adr (isolate Japan/A4/1994) (HBV-C)

CAPSD_HBVC9

Hepatitis B virus genotype C subtype ayw (isolate Australia/AustRC/1992) (HBV-C)

CAPSD_HBVCP

Chimpanzee hepatitis B virus (isolate United Kingdom/LSH/1988) (HBVcpz)

1HHH

CAPSD_HBVD1

Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979) (HBV-D)

2G33; 2G34; 2QIJ; 3KXS; 4BMG; 4G93; 5D7Y; 5E0I; 5GMZ; 5WTW; 6BVF; 6BVN; 6CWD; 6CWT; 6J10; 6VZP; 6W0K; 6WFS; 7K5M; 7S76; 8I71

CAPSD_HBVD2

Hepatitis B virus genotype D (isolate France/alpha1/1989) (HBV-D)

CAPSD_HBVD4

Hepatitis B virus genotype D subtype ayw (isolate Japan/JYW796/1988) (HBV-D)

CAPSD_HBVD5

Hepatitis B virus genotype D subtype ayw (isolate Australia/AustKW/1991) (HBV-D)

CAPSD_HBVD6

Hepatitis B virus genotype D subtype ayw (isolate Italy/CI/1992) (HBV-D)

CAPSD_HBVD7

Hepatitis B virus genotype D (isolate Germany/1-91/1991) (HBV-D)

CAPSD_HBVF1

Hepatitis B virus genotype F2 (isolate Brazil/w4B) (HBV-F)

CAPSD_HBVF6

Hepatitis B virus genotype F2 subtype adw4q (isolate Senegal/9203) (HBV-F)

CAPSD_HBVG1

Hepatitis B virus genotype G subtype adw2 (isolate United States/sf/1990) (HBV-G)

CAPSD_HBVG2

Hepatitis B virus genotype G (isolate United States/USG17/2002) (HBV-G)

CAPSD_HBVG3

Hepatitis B virus genotype G (isolate IG29227/2000) (HBV-G)

CAPSD_HBVGB

Gibbon hepatitis B virus subtype ayw3q (isolate Hope) (HBVgbn)

CAPSD_HBVGO

Gorilla hepatitis B virus (isolate Cameroon/gor97) (HBVgor)

CAPSD_HBVH3

Hepatitis B virus genotype H subtype adw4 (isolate Nicaragua/2928Nic/1997) (HBV-H)

CAPSD_HHBV

Heron hepatitis B virus (HHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HPBDB

Duck hepatitis B virus (isolate brown Shanghai duck S5) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HPBDC

Duck hepatitis B virus (strain China) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HPBDW

Duck hepatitis B virus (isolate white Shanghai duck S31) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_WHV1

Woodchuck hepatitis B virus (isolate 1) (WHV)

CAPSD_WHV2

Woodchuck hepatitis B virus (isolate 2) (WHV)

CAPSD_WHV4

Woodchuck hepatitis B virus (isolate 7) (WHV)

CAPSD_WMHBV

Woolly monkey hepatitis B virus (isolate Louisville) (WMHBV)

40 entries

Structural polyprotein (p130)

POLS_CHIKS

Chikungunya virus (strain S27-African prototype) (CHIKV) reference strain

2RSW; 7CVY; 7CVZ; 7CW0; 7CW2; 7CW3

POLS_RUBVD

Rubella virus (strain Cendehill) (RUBV) reference strain

Structural polyprotein (p110)

POLS_RUBVN

Rubella virus (strain RN-UK86) (RUBV) reference strain

Structural polyprotein (p110)

POLS_RUBVT

Rubella virus (strain Therien) (RUBV) reference strain

Structural polyprotein (p110)

5KHE; 5KHF

POLS_RUBVV

Rubella virus (strain TO-336) (RUBV) reference strain

Structural polyprotein (p110)

POLS_SFV

Semliki forest virus (SFV) reference strain

1DYL; 1I9W; 1RER; 1VCP; 1VCQ; 2ALA; 2V33; 8D87; 8IHP

POLS_SINDV

Sindbis virus (SINV) reference strain

1KXA; 1KXB; 1KXC; 1KXD; 1KXE; 1KXF; 1LD4; 1SVP; 1Z8Y; 2SNV; 2SNW; 3J0F; 3MUU; 3MUW

POLS_AURAV

Aura virus (AURAV)

4AGJ; 4AGK; 4UON; 5G4B

POLS_BFV

Barmah forest virus (BFV)

2YEW

POLS_CHIK3

Chikungunya virus (strain 37997) (CHIKV)

3J2W; 5VU2; 6NK5; 6NK6; 8DWW; 8DWX; 8DWY

POLS_CHIKN

Chikungunya virus (strain Nagpur) (CHIKV)

POLS_EEEV

Eastern equine encephalitis virus (EEEV) (Eastern equine encephalomyelitis virus)

POLS_EEEV1

Eastern equine encephalitis virus (strain PE-0.0155) (EEEV) (Eastern equine encephalomyelitis virus)

POLS_EEEV3

Eastern equine encephalitis virus (strain va33[ten broeck]) (EEEV) (Eastern equine encephalomyelitis virus)

6MX4; 6MX7

POLS_EEEV8

Eastern equine encephalitis virus (strain PE-3.0815) (EEEV) (Eastern equine encephalomyelitis virus)

POLS_EEEVF

Eastern equine encephalitis virus (strain Florida 91-469) (EEEV) (Eastern equine encephalomyelitis virus)

6MW9; 6MWC; 6MWV; 6MWX; 6MX4; 6ODF; 6XO4; 6XOB; 7N69; 7N6A; 7V0N; 7V0O; 7V0P

POLS_EEVV3

Venezuelan equine encephalitis virus (strain 3880) (VEEV)

POLS_EEVV8

Venezuelan equine encephalitis virus (strain TC-83) (VEEV)

1EP5; 1EP6; 3J0C; 3J0G; 7SFU; 7SFV; 7SFW; 8DEQ; 8DER; 8EEU; 8EEV

POLS_EEVVE

Venezuelan equine encephalitis virus (strain Everglades Fe3-7c) (VEEV)

POLS_EEVVM

Venezuelan equine encephalitis virus (strain Mena II) (VEEV)

POLS_EEVVP

Venezuelan equine encephalitis virus (strain P676) (VEEV)

POLS_EEVVT

Venezuelan equine encephalitis virus (strain Trinidad donkey) (VEEV)

3VE6

POLS_GETV

Getah virus (GETV)

7FD2; 7V4T; 7VGA; 7WC2; 7WCO

POLS_MAYAB

Mayaro virus (strain Brazil) (MAYV)

6W1C; 6W2U; 7LIH

POLS_MIDDV

Middelburg virus

POLS_ONNVG

O'nyong-nyong virus (strain Gulu) (ONNV)

POLS_ONNVI

O'nyong-nyong virus (strain Igbo Ora) (ONNV) (Igbo Ora virus)

POLS_ONNVS

O'nyong-nyong virus (strain SG650) (ONNV)

POLS_RRVN

Ross river virus (strain NB5092) (RRV)

POLS_RRVT

Ross river virus (strain T48) (RRV)

6VYV

POLS_RUBVB

Rubella virus (strain BRD1) (RUBV)

Structural polyprotein (p110)

POLS_RUBVC

Rubella virus (strain BRDII) (RUBV)

Structural polyprotein (p110)

POLS_RUBVM

Rubella virus (strain M33) (RUBV)

Structural polyprotein (p110)

4ADG; 4ADI; 4ADJ; 4B3V; 4HAR; 4HBE; 4HBO; 5KHC

POLS_RUBVO

Rubella virus (strain TO-336 vaccine) (RUBV)

Structural polyprotein (p110)

POLS_RUBVR

Rubella virus (strain RA27/3 vaccine) (RUBV)

Structural polyprotein (p110)

POLS_SAGV

Sagiyama virus (SAGV)

POLS_SINDO

Sindbis virus subtype Ockelbo (strain Edsbyn 82-5) (OCKV) (Ockelbo virus)

1WYK

POLS_SLDV

Sleeping disease virus (SDV)

POLS_SPDV

Salmon pancreas disease virus (SPDV)

POLS_WEEV

Western equine encephalitis virus (WEEV)

8DEC; 8DED; 8DEE; 8DEF

3 entries

Frameshifted structural polyprotein (p130)

POLSF_CHIKS

Chikungunya virus (strain S27-African prototype) (CHIKV) reference strain

5H23

POLSF_SINDV

Sindbis virus (SINV) reference strain

POLSF_SFV

Semliki forest virus (SFV)

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