Ribosomal frameshifting

Programmed Ribosomal frameshifting is an alternate mechanism of translation to merge proteins encoded by two overlapping open reading frames. The frameshift occurs at low frequency and consists of ribosomes slipping by one base in either the 5'(-1) or 3'(+1) directions during translation. Some viruses contains both a +1 and a -1 ribosomal frameshifts

-1 Ribosomal frameshift

All cis-acting frameshift signals encoded in mRNAs are minimally composed of two functional elements: a heptanucleotide “slippery sequence” conforming to the general form X XXY YYZ, followed by a RNA structural element, usually a H-type RNA pseudoknot, positioned an optimal number of nucleotides (5 to 9) downstream. Mechanistically, the ribosome is stalled on the slippery sequence by the pseudoknot structure in 3'. In about 10% cases, the ribosome will backtrack one nucleotide, creating one or more mismatchs between tRNAs and mRNA. Translation resolves on the backtracked ribosome in the -1 frame.

Family Genus Virus Type RefSeq .......... XXXYYY Z .......... Frameshift position Freq Ref
-1/-2 FRAMESHIFTS
Totiviridae Giardiavirus Giardia lamblia virus -1 NC_003555 CGUGCGCCAU CCCUUU A UCCGAUCGUG 2871
Totivirus Saccharomyces cerevisiae virus L-A -1 NC_003745 GUACUCAGCA GGGUUU A GGAGUGGUAG 1964
Astroviridae Avastrovirus Turkey astrovirus 1 -1 NC_002470 CUACGUGUUC AAAAAA C UAGAUAGUCA 3307
Mamastrovirus Human astrovirus 1 -1 NC_001943 ACAAGGCCCC AAAAAA C UACAAAGGGC 2845
Luteoviridae Enamovirus Pea enation mosaic virus-1 -1 NC_003629 CCAGACGCUC GGGAAA C GGAUUAUUCC 2035
Luteovirus Barley yellow dwarf virus-PAV -1 NC_004750 TTGACTCTGT GGGUUU U AGAGGGGCTC 1159
Polerovirus Potato leafroll virus -1 NC_001747 CAAACAAGCC UUUAAA U GGGCAAGCGG 1774
Arteriviridae Arterivirus Equine arteritis virus -1 NC_002532 CAGUGAAUCA GUUAAA C UGAGAGCGCC 5405
Porcine reproductive and respiratory syndrome virus -2 NC_001961 UGAGCCGUCA GGUUU UU GACCUCGUCU 3887-3888
Coronaviridae Alphacoronavirus Human coronavirus 229E -1 NC_002645 AUAACAGUUA UUUAAA C GAGUCCGGGG 12520
Betacoronavirus Human SARS coronavirus -1 NC_004718 CAUCAACGUU UUUAAA C GGGUUUGCGG 13398
Gammacoronavirus Avian Infectious bronchitis virus -1 NC_002645 AUAAGAAUUA UUUAAA C GGGUACGGGG 12354
Bafinivirus White bream virus 1 NC_008516 AGCAGCCGCC UUUAAA C TGGAGGGCAG 14555
Torovirus Breda virus 1 NC_007447 CUGUUGGUGA UUUAAA C UGCUGAGAGA 14184
FLaviviridae Flavivirus West nile virus -1 NC_009942 UAUGAUUGAC CCUUUU C AGUUGGGCCU 3552 30-50%
Mesoniviridae Mesonivirus Alphamesonivirus 1 -1 NC_015668 GCACCCUUUG GAUUUU C CAAAGUGGGC 7841
Picornaviridae Cardiovirus Encephalomyocardidis virus -1 NC_001479 CAAGGAAACA GGUUUU C CAGACCCAAG 3998
Tombusviridae Dianthovirus Red clover necrotic mosaic virus -1 NC_003756 AAUCCCUUGA GGAUUU U UAGGCGGCGG 831
Retroviridae Alpharetrovirus Avian leukosis virus -1 NC_001408 UCCGCUUGAC AAAUUU A UAGGGAGGGC 2474
Betaretrovirus Mouse mammary tumor virus -1 NC_001503 CUGAAAAUUC AAAAAA C UUGUAAAGGG 2082
Deltaretrovirus Human T-lymphotropic virus 1 -1 NC_001436 UCCCACACCC AAAAAA C UCCAUAGGGG 1718
Lentivirus Human immunodeficiency virus 1 -1 NC_001802 GACAGGCUAA UUUUUU A GGGAAGAUCU 1637
Unclassified Sobemovirus Cocksfoot mottle sobemovirus -1 NC_002618 CAAUCCGGCC UUUAAA C UACCAGCGGG 1640
Umbravirus Groundnut rosette virus -1 NC_003603 CCGGGGCACA AAAUUU U UAGUUGGGGA 867
Myoviridae Mulikevirus Mu phage -2 NC_000929 CGCUGACACA AGAAC GG GGGCGAGUGG 23960
Myoviridae P2likeviruses Enterobacteria phage P2 -1 NC_003603 CGGUAAGGUG GUCGGU U UUUUGUCGCC 19679
Siphoviridae Lambdalikevirus Phage lambda +1 NC_001416 AGAGCCUGUU UCUGC GG GAAAGTGTTC 10110
Togaviridae Alphavirus Sindbis virus +1 NC_001547 GCUGCCUGCC UUUUUU A GUGGUUCCGG 10028 10-18%

Source:Michael Bekaert, thesis (in french) etude du decalage de phase de lecture dans le genome de Saccharomyces cerevisiae

+1 ribosomal frameshift

This frameshift is mechanistically different from the -1. The ribosome stalls on a slippery sequence, making a long pause at a rare codon for which few tRNAs are available. This long pause can be resolved by a movement forward of one nucleotide, creating one or more mismatchs between tRNAs and mRNA. Translation resolves on the advanced ribosome in the +1 frame.

Family Genus Virus Type RefSeq .......... XXXYYY Z .......... Frameshift position Freq Ref
+1 FRAMESHIFTS (rare codon in yellow)
Orthomyxoviridae Influenzavirus A Influenzavirus A +1 NC_002022 UCUGGGAUUC CUUU CGU CAGUCCGAG 599
Totiviridae Leishmaniavirus Leishmania RNA virus 1-4 +1 NC_003601 Not Identified NA
Siphoviridae Lambdalikevirus Bacillus phage SPP1 +1 NC_004166 ACTGTTCCCG CTC CCC TAATGCGCC 11,111 ~10%

Matching UniProtKB/Swiss-Prot entries

544 entries grouped by strain (browse by keywords)

All proteins are shown (view only 405 complete proteome entries)

4 entries

Enterobacteria phage T7 (Bacteriophage T7) reference strain

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CAPSA_BPT7 Major capsid protein 10A (Gene product 10A) (Gp10A) (Major head protein 10A)
CAPSB_BPT7 Minor capsid protein 10B (Gene product 10B) (Gp10B) (Minor head protein 10B)
SGS_BPT7 Protein suppressor of silencing (Gene product 5.5)
V5557_BPT7 Fusion protein 5.5/5.7

3 entries

Human T-cell leukemia virus 1 (isolate Caribbea HS-35 subtype A) (HTLV-1) reference strain

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GAG_HTL1C Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...
POL_HTL1C Gag-Pro-Pol polyprotein (Pr160Gag-Pro-Pol) [Cleaved into: Matrix protein p19 (MA); Capsid protein ...
PRO_HTL1C Gag-Pro polyprotein (Pr76Gag-Pro) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...

3 entries

Human T-cell leukemia virus 2 (HTLV-2) reference strain

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GAG_HTLV2 Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...
POL_HTLV2 Gag-Pro-Pol polyprotein (Pr160Gag-Pro-Pol) [Cleaved into: Matrix protein p19 (MA); Capsid protein ...
PRO_HTLV2 Gag-Pro polyprotein (Pr76Gag-Pro) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...

3 entries

Human T-cell leukemia virus 3 (strain 2026ND) (HTLV-3) reference strain

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GAG_HTL32 Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...
PRO_HTL32 Gag-Pro polyprotein (Pr76Gag-Pro) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...
POL_HTL32 Gag-Pro-Pol polyprotein (Pr160Gag-Pro-Pol) [Cleaved into: Matrix protein p19 (MA); Capsid protein ...

3 entries

Mouse mammary tumor virus (strain C3H) (MMTV) reference strain

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GAG_MMTVC Gag polyprotein [Cleaved into: Matrix protein p10; Phosphorylated protein pp21; Protein p3; Protein ...
PRO_MMTVC Gag-Pro polyprotein [Cleaved into: Matrix protein p10; Phosphorylated protein pp21; Protein p3; ...
POL_MMTVC Gag-Pro-Pol polyprotein [Cleaved into: Matrix protein p10; Phosphorylated protein pp21; Protein p3; ...

2 entries

Avian infectious bronchitis virus (strain Beaudette) (IBV) reference strain

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R1A_IBVB Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 2 (nsp2) ...
R1AB_IBVB Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 2 ...

2 entries

Avian leukosis virus RSA (RSV-SRA) (Rous sarcoma virus (strain Schmidt-Ruppin A)) reference strain

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GAG_RSVSA Gag-Pro polyprotein [Cleaved into: Matrix protein p19; p2A; p2B; p10; p3; Capsid protein p27; ...
POL_RSVSA Gag-Pro-Pol polyprotein [Cleaved into: Matrix protein p19; p2A; p2B; p10; p3; Capsid protein p27; ...

2 entries

Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005) reference strain

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R1A_BC512 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_BC512 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 ...

2 entries

Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004) reference strain

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R1AB_BCHK4 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_BCHK4 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004) reference strain

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R1AB_BCHK5 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_BCHK5 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9) reference strain

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R1AB_BCHK9 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_BCHK9 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Berne virus (BEV) reference strain

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R1AB_BEV Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 ...
R1A_BEV Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); ...

2 entries

Breda virus 1 (BRV-1) reference strain

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R1A_BRV1 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); ...
R1AB_BRV1 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 ...

2 entries

Cocksfoot mottle virus (isolate Dactylis glomerata/Norway/CfMV-NO/1995) (CfMV) reference strain

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P2A_CFMVN Polyprotein P2A [Cleaved into: N-terminal protein; Serine protease (EC 3.4.21.-); VPg; Putative ...
RDRP_CFMVN Replicase polyprotein P2AB [Cleaved into: N-terminal protein; Serine protease (EC 3.4.21.-); VPg; ...

2 entries

Encephalomyocarditis virus (strain Rueckert) (EMCV) reference strain

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ALT2B_EMCVR Protein 2B*
POLG_EMCVR Genome polyprotein [Cleaved into: Leader protein; Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Rho) ...

2 entries

Escherichia phage Mu (Bacteriophage Mu) reference strain

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TAPFS_BPMU Probable tail assembly protein FS-gp41
TAP_BPMU Probable tail assembly protein gp41 (Gene product 41) (gp41) (Tail assembly chaperone)

2 entries

Escherichia phage N15 (Bacteriophage N15) reference strain

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G_BPN15 Tail assembly protein G (Gene product 14) (gp14) (Minor tail protein G) (Tail assembly chaperone) ...
GT_BPN15 Tail assembly protein GT (Gene product 15) (gp15) (Gene product GT) (gpGT) (Minor tail protein GT)

2 entries

Escherichia phage P2 (Bacteriophage P2) reference strain

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TAP_BPP2 Tail assembly protein E (Gene product E) (gpE) (Tail assembly chaperone) (TAC)
TAPFS_BPP2 Tail assembly protein E' (Gene product E') (gpE') (Tail assembly chaperone) (TAC)

2 entries

Escherichia phage lambda (Bacteriophage lambda) reference strain

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G_LAMBD Tail assembly protein G (Gene product G) (gpG) (Minor tail protein G) (Tail assembly chaperone) ...
GT_LAMBD Tail assembly protein GT (Gene product GT) (gpGT) (Minor tail protein GT)

2 entries

Giardia lamblia virus (isolate Wang) (GLV) reference strain

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CAPSD_GLVWB Major capsid protein (Gag protein) (Major coat protein)
RDRP_GLVWB Probable RNA-directed RNA polymerase (EC 2.7.7.48) (Gag-Pol protein)

2 entries

Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) (Grapevine leafroll-associated closterovirus (isolate 109)) reference strain

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R1AB_GLRV3 Replicase polyprotein 1ab [Cleaved into: Leader protease (L-Pro) (EC 3.4.22.-) (Papain-like cysteine ...
R1A_GLRV3 Replicase protein 1a [Cleaved into: Leader protease (L-Pro) (EC 3.4.22.-) (Papain-like cysteine ...

2 entries

Hepatitis C virus genotype 1a (isolate H) (HCV) reference strain

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F_HCVH F protein (Alternate reading frame protein/F-protein) (ARFP/F) (Frameshifted protein) (p16) (p17)
POLG_HCVH Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; ...

2 entries

Human SARS coronavirus (SARS-CoV) (Severe acute respiratory syndrome coronavirus) reference strain

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R1A_CVHSA Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_CVHSA Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

2 entries

Human astrovirus-1 (HAstV-1) reference strain

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NS1AB_HASV1 Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...
NS1A_HASV1 Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...

2 entries

Human coronavirus 229E (HCoV-229E) reference strain

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R1A_CVH22 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_CVH22 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 ...

2 entries

Human coronavirus EMC (isolate United Kingdom/H123990006/2012) (HCoV-EMC) reference strain

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R1AB_CVEMC Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_CVEMC Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Host translation inhibitor nsp1 ...

2 entries

Human coronavirus HKU1 (isolate N1) (HCoV-HKU1) reference strain

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R1AB_CVHN1 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_CVHN1 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Human coronavirus NL63 (HCoV-NL63) reference strain

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R1AB_CVHNL Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 ...
R1A_CVHNL Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Human coronavirus OC43 (HCoV-OC43) reference strain

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R1A_CVHOC Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_CVHOC Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

2 entries

Human immunodeficiency virus type 1 group M subtype A (isolate MAL) (HIV-1) reference strain

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GAG_HV1MA Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1MA Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1) reference strain

Select_allDeselect_all
GAG_HV1B1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1B1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

pdb 1A9M; 1AJV; 1AJX; 1AXA; 1BQM; 1BQN; 1D4H; 1D4I; 1D4J; 1DLO; 1DW6; 1EBK; 1EBW; 1EBY; 1EBZ; 1EC0; 1EC1; 1EC2; 1EC3; 1EET; 1G35; 1GNM; 1GNN; 1GNO; 1HAR; 1HBV; 1HEF; 1HEG; 1HIH; 1HMV; 1HNI; 1HNV; 1HOS; 1HPS; 1HPZ; 1HQE; 1HQU; 1HRH; 1HTE; 1HTF; 1HTG; 1HVI; 1HVK; 1HVP; 1HVU; 1HYS; 1IKV; 1IKW; 1IKX; 1IKY; 1J5O; 1KJH; 1MER; 1MES; 1MET; 1MEU; 1N5Y; 1N6Q; 1NPA; 1NPV; 1NPW; 1QE1; 1QMC; 1R0A; 1RDH; 1RTD; 1RVL; 1RVM; 1RVN; 1RVO; 1RVP; 1RVQ; 1RVR; 1S6P; 1S6Q; 1S9E; 1S9G; 1SBG; 1SUQ; 1SV5; 1T03; 1T05; 1T7K; 1TV6; 1TVR; 1UWB; 1W5V; 1W5W; 1W5X; 1W5Y; 1YT9; 1ZP8; 1ZPA; 1ZSF; 1ZSR; 2AQU; 2B5J; 2B6A; 2BAN; 2BBB; 2BE2; 2EXF; 2G69; 2HB3; 2HMI; 2HNZ; 2HS1; 2HS2; 2I4D; 2I4U; 2I4V; 2I4W; 2I4X; 2I5J; 2IAJ; 2IC3; 2IDW; 2IEO; 2JZW; 2L45; 2L46; 2L4L; 2UXZ; 2UY0; 2VG5; 2VG6; 2VG7; 2X4U; 2YKM; 2YKN; 2ZD1; 2ZE2; 3AVI; 3BGR; 3DLK; 3GGA; 3GGV; 3GGX; 3HVT; 3IG1; 3IRX; 3IS9; 3ISN; 3ITH; 3JSM; 3JYT; 3K2P; 3K4V; 3KLE; 3KLF; 3KLG; 3KLH; 3KLI; 3NDT; 3NU3; 3NU4; 3NU5; 3NU6; 3NU9; 3NUJ; 3NUO; 3OK9; 3PSU; 3QAA; 3QLH; 3QO9; 3TKG; 3TKW; 3TL9; 3TLH; 3V4I; 3V6D; 3V81; 3ZPS; 3ZPT; 3ZPU; 4COE; 4CP7; 4CPQ; 4CPR; 4CPS; 4CPT; 4CPU; 4CPW; 4CPX; 4DG1; 4G1Q; 4G8G; 4G8I; 4G9D; 4G9F; 4H4M; 4H4O; 4I2P; 4I2Q; 4ICL; 4ID5; 4IDK; 4IFV; 4IFY; 4IG0; 4IG3; 4KFB; 4KKO; 4KO0; 4LSL; 4LSN; 4MFB; 4O44; 4O4G; 4OJR; 4PQU; 4PUO; 4PWD; 4Q0B; 4QAG; 4R5P; 4RW4; 4RW6; 4RW7; 4RW8; 4RW9; 4U8W; 4WE1; 4YE3; 4YHQ; 4ZIP; 4ZLS; 5AGZ; 5AH6; 5AH7; 5AH8; 5AH9; 5AHA; 5AHB; 5AHC; 5BRY; 5BS4; 5C24; 5C25; 5C42; 5CYM; 5CYQ; 5D3G; 5FDL; 5HBM; 5HLF; 5HP1; 5HRO; 5I3U; 5I42; 5J1E; 5JFP; 5JFU; 5JG1; 5T6Z; 5T70; 5TEP; 5TER; 5TW3; 5TXL; 5TXM; 5TXN; 5TXO; 5TXP

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) (HIV-1) reference strain

Select_allDeselect_all
GAG_HV1H2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1H2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate MN) (HIV-1) reference strain

Select_allDeselect_all
GAG_HV1MN Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1MN Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype D (isolate ELI) (HIV-1) reference strain

Select_allDeselect_all
GAG_HV1EL Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1EL Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850) (HIV-1) reference strain

Select_allDeselect_all
GAG_HV1VI Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1VI Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype A (isolate BEN) (HIV-2) reference strain

Select_allDeselect_all
GAG_HV2BE Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2BE Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Influenza A virus (strain A/Duck/Germany/1949 H10N7) reference strain

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PAX_I49A1 Protein PA-X
PA_I49A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Goose/Guangdong/1/1996 H5N1 genotype Gs/Gd) reference strain

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PA_I96A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I96A0 Protein PA-X

2 entries

Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) reference strain

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PAX_I34A1 Protein PA-X
PA_I34A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Seal/Massachusetts/1/1980 H7N7) reference strain

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PA_I80A2 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I80A2 Protein PA-X

1 entry

Influenza A virus (strain A/Singapore/1/1957 H2N2) reference strain

PA_I57A5 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain

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R1A_LIYV9 Replicase polyprotein 1a [Cleaved into: Leader protease (L-PRO) (EC 3.4.22.-); ...
R1AB_LIYV9 Replicase polyprotein 1ab [Cleaved into: Leader protease (L-PRO) (EC 3.4.22.-); ...

2 entries

Murine coronavirus (strain 2) (MHV-2) (Murine hepatitis virus) reference strain

Select_allDeselect_all
R1AB_CVM2 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_CVM2 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Murine coronavirus (strain A59) (MHV-A59) (Murine hepatitis virus) reference strain

Select_allDeselect_all
R1A_CVMA5 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_CVMA5 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

2 entries

Mycobacterium phage D29 (Mycobacteriophage D29) reference strain

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TAP25_BPMD2 Tail assembly protein Gp25 (Gene 25 protein) (Gp25)
VG24_BPMD2 Tail assembly protein Gp24 (Gene product 24) (Gp24) (Minor tail protein Gp24)

2 entries

Mycobacterium phage L5 (Mycobacteriophage L5) reference strain

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TAP25_BPML5 Tail assembly protein Gp25 (Gene 25 protein) (Gp25)
VG24_BPML5 Tail assembly protein Gp24 (Gene product 24) (Gp24) (Minor tail protein Gp24)

2 entries

Pea enation mosaic virus-1 (strain WSG) (PEMV-1) reference strain

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P1_PEMVW Protein P1 (Genome-linked protein precursor) (ORF1 protein) [Cleaved into: Serine protease (EC ...
RDRP_PEMVW Protein P1-P2 [Cleaved into: Serine protease (EC 3.4.21.-); RNA-directed RNA polymerase (EC ...

2 entries

Poinsettia latent virus (isolate Euphorbia pulcherrima/Germany/Siepen/2005) (PnLV) (Poinsettia cryptic virus) reference strain

Select_allDeselect_all
P1_PNLV Genome-linked protein precursor [Cleaved into: Serine protease (EC 3.4.21.-); VPg]
RDRP_PNLV Protein P2-P3 [Cleaved into: Serine protease (EC 3.4.21.-); RNA-directed RNA polymerase (EC ...

2 entries

Porcine epidemic diarrhea virus (strain CV777) (PEDV) reference strain

Select_allDeselect_all
R1A_PEDV7 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_PEDV7 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 ...

2 entries

Porcine reproductive and respiratory syndrome virus (strain Lelystad) (PRRSV) reference strain

Select_allDeselect_all
RPOA_PRRSL Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha ...
RPOTF_PRRSL Replicase polyprotein 1TF (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha ...

2 entries

Porcine transmissible gastroenteritis coronavirus (strain Purdue) (TGEV) reference strain

Select_allDeselect_all
R1AB_CVPPU Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 ...
R1A_CVPPU Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Potato leafroll virus (strain Potato/Scotland/strain 1/1984) (PLrV) reference strain

Select_allDeselect_all
P1_PLRV1 Protein P1 (69.7 kDa protein) (Genome-linked protein precursor) (Protein ORF1) [Cleaved into: Serine ...
RDRP_PLRV1 Protein P1-P2 [Cleaved into: Serine protease (EC 3.4.21.-); RNA-directed RNA polymerase (EC ...

2 entries

Potato virus Y (strain N) (PVY) reference strain

Select_allDeselect_all
MVP_PVYN P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_PVYN Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Saccharomyces cerevisiae virus L-A (ScV-L-A) (ScVL1) reference strain

Select_allDeselect_all
GAG_SCVLA Major capsid protein (Gag protein) (Major coat protein)
RDRP_SCVLA Probable RNA-directed RNA polymerase (EC 2.7.7.48) (Gag-Pol protein)

1 entry

Semliki forest virus (SFV) reference strain

POLS_SFV Structural polyprotein (p130) [Cleaved into: Capsid protein (EC 3.4.21.90) (Coat protein) (C); p62 ...

2 entries

Simian immunodeficiency virus (isolate EK505) (SIV-cpz) (Chimpanzee immunodeficiency virus) reference strain

Select_allDeselect_all
GAG_SIVEK Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVEK Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus (isolate MB66) (SIV-cpz) (Chimpanzee immunodeficiency virus) reference strain

Select_allDeselect_all
GAG_SIVMB Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...
POL_SIVMB Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus (isolate TAN1) (SIV-cpz) (Chimpanzee immunodeficiency virus) reference strain

Select_allDeselect_all
GAG_SIVTN Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVTN Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Southern bean mosaic virus (isolate Bean/United States/Arkansas) (SBMV) reference strain

Select_allDeselect_all
P2A_SBMVA Polyprotein P2A [Cleaved into: N-terminal protein; Serine protease (EC 3.4.21.-); VPg; Putative ...
RDRP_SBMVA Replicase polyprotein P2AB [Cleaved into: N-terminal protein; Serine protease (EC 3.4.21.-); VPg; ...

2 entries

Southern cowpea mosaic virus (SCPMV) (Southern bean mosaic virus (strain cowpea)) reference strain

Select_allDeselect_all
P2A_SCPMV Polyprotein P2A [Cleaved into: N-terminal protein; Serine protease (EC 3.4.21.-); VPg; Putative ...
RDRP_SCPMV Replicase polyprotein P2AB [Cleaved into: N-terminal protein; Serine protease (EC 3.4.21.-); VPg; ...

2 entries

Turkey astrovirus 1 (TAstV-1) reference strain

Select_allDeselect_all
NS1AB_TASV1 Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...
NS1A_TASV1 Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...

2 entries

Turnip yellows virus (isolate FL-1) (TuYV) (BWYV-FL1) reference strain

Select_allDeselect_all
P1_TYYVF Protein P1 (66.2 kDa protein) (Genome-linked protein precursor) (Protein ORF1) [Cleaved into: Serine ...
RDRP_TYYVF Protein P1-P2 [Cleaved into: Serine protease (EC 3.4.21.-); RNA-directed RNA polymerase (EC ...

2 entries

White bream virus (isolate Blicca bjoerkna L./Germany/DF24/00) (WBV) reference strain

Select_allDeselect_all
R1A_WBV24 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1); ...
R1AB_WBV24 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 ...

1 entry

Bacillus phage SPP1 (Bacteriophage SPP1) reference strain

TUBE_BPSPP Tail tube protein gp17.1* (TTP) (Gene product 17.1) (gp17.1) (Major tail protein) (MTP)

1 entry

Barley yellow dwarf virus (isolate PAV) (BYDV) reference strain

RDRP_BYDVP Putative RNA-directed RNA polymerase (EC 2.7.7.48)

1 entry

Beet necrotic yellow vein virus (isolate Japan/S) (BNYVV) reference strain

CAPSD_BNYVS Capsid readthrough protein (CP-RT)

1 entry

Beet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain

R1AB_BYVU Replicase polyprotein 1ab [Cleaved into: Leader protease (L-Pro) (EC 3.4.22.-) (Papain-like cysteine ...

1 entry

Carnation ringspot virus (isolate Lommel) (CRSV) reference strain

RDRP_CRSVL RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)

1 entry

Equine arteritis virus (strain Bucyrus) (EAV) reference strain

RPOA_EAVBU Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 papain-like cysteine proteinase ...

1 entry

Feline coronavirus (strain FIPV WSU-79/1146) (FCoV) reference strain

R1AB_FIPV Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 1 ...

1 entry

Groundnut rosette virus (strain MC1) (GRV) reference strain

RDRP_GRVMC RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48)

1 entry

Influenza B virus (strain B/Lee/1940) reference strain

PA_INBLE Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

1 entry

Influenza C virus (strain C/Ann Arbor/1/1950) reference strain

PA_INCAA Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

1 entry

Porcine reproductive and respiratory syndrome virus (strain HB-1) (PRRSV) reference strain

RPOA_PRRSB Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha ...

1 entry

Red clover necrotic mosaic virus (RCNMV) reference strain

RDRP_RCNMV RNA-directed RNA polymerase (EC 2.7.7.48) (Protein p88)

1 entry

Simian hemorrhagic fever virus (SHFV) reference strain

RPOA_SHFV Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1-alpha papain-like cysteine ...

3 entries

Human T-cell leukemia virus 1 (isolate Melanesia mel5 subtype C) (HTLV-1)

Select_allDeselect_all
GAG_HTL1L Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...
PRO_HTL1L Gag-Pro polyprotein (Pr76Gag-Pro) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...
POL_HTL1L Gag-Pro-Pol polyprotein (Pr160Gag-Pro-Pol) [Cleaved into: Matrix protein p19 (MA); Capsid protein ...

3 entries

Human T-cell leukemia virus 1 (strain Japan ATK-1 subtype A) (HTLV-1)

Select_allDeselect_all
GAG_HTL1A Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...
PRO_HTL1A Gag-Pro polyprotein (Pr76Gag-Pro) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...
POL_HTL1A Gag-Pro-Pol polyprotein (Pr160Gag-Pro-Pol) [Cleaved into: Matrix protein p19 (MA); Capsid protein ...

3 entries

Human T-cell leukemia virus 3 (strain Pyl43) (HTLV-3)

Select_allDeselect_all
GAG_HTL3P Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...
PRO_HTL3P Gag-Pro polyprotein (Pr76Gag-Pro) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...
POL_HTL3P Gag-Pro-Pol polyprotein (Pr160Gag-Pro-Pol) [Cleaved into: Matrix protein p19 (MA); Capsid protein ...

2 entries

Avian infectious bronchitis virus (strain Beaudette CK) (IBV)

Select_allDeselect_all
R1AB_IBVBC Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 2 ...
R1A_IBVBC Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 2 (nsp2) ...

2 entries

Avian infectious bronchitis virus (strain M41) (IBV)

Select_allDeselect_all
R1AB_IBVM Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Non-structural protein 2 ...
R1A_IBVM Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 2 (nsp2) ...

2 entries

Avian nephritis virus 1 (ANV-1)

Select_allDeselect_all
NS1A_ANV1 Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...
NS1AB_ANV1 Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...

2 entries

Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005)

Select_allDeselect_all
R1A_BC133 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_BC133 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

2 entries

Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)

Select_allDeselect_all
R1AB_BC279 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_BC279 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Bat coronavirus HKU3 (BtCoV) (SARS-like coronavirus HKU3)

Select_allDeselect_all
R1AB_BCHK3 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_BCHK3 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like coronavirus Rp3)

Select_allDeselect_all
R1AB_BCRP3 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_BCRP3 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Bean common mosaic necrosis virus (strain NL-3) (BCMNV) (Bean common mosaic virus serotype A (strain NL-3))

Select_allDeselect_all
MVP_BCMNN P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_BCMNN Genome polyprotein [Cleaved into: P1 proteinase (N-terminal protein); Helper component proteinase ...

2 entries

Bean yellow mosaic virus

Select_allDeselect_all
MVP_BYMV P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_BYMV Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Beet mosaic virus (BtMV)

Select_allDeselect_all
MVP_BTMV P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_BTMV Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT) (BCV)

Select_allDeselect_all
R1A_CVBEN Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_CVBEN Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

2 entries

Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN) (BCV)

Select_allDeselect_all
R1A_CVBLU Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_CVBLU Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

2 entries

Bovine coronavirus (strain Mebus) (BCoV) (BCV)

Select_allDeselect_all
R1AB_CVBM Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_CVBM Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Bovine coronavirus (strain Quebec) (BCoV) (BCV)

Select_allDeselect_all
R1A_CVBQ Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_CVBQ Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

2 entries

Bovine immunodeficiency virus (strain R29) (BIV) (Bovine immunodeficiency-like virus)

Select_allDeselect_all
GAG_BIV29 Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p16 (MA); p2L; Capsid protein p26 (CA); p3; ...
POL_BIV29 Gag-Pol polyprotein (Pr170Gag-Pol) [Cleaved into: Matrix protein p16 (MA); p2L; Capsid protein p26 ...

2 entries

Encephalomyocarditis virus

Select_allDeselect_all
ALT2B_EMCV Protein 2B*
POLG_EMCV Genome polyprotein [Cleaved into: Leader protein; Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Rho) ...

2 entries

Hepatitis C virus genotype 1a (isolate 1) (HCV)

Select_allDeselect_all
F_HCV1 F protein (Alternate reading frame protein/F-protein) (ARFP/F) (Frameshifted protein) (p16) (p17)
POLG_HCV1 Genome polyprotein [Cleaved into: Core protein p21 (Capsid protein C) (p21); Core protein p19; ...

2 entries

Human astrovirus-4 (HAstV-4)

Select_allDeselect_all
NS1A_HASV4 Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...
NS1AB_HASV4 Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...

2 entries

Human astrovirus-5 (HAstV-5)

Select_allDeselect_all
NS1AB_HASV5 Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...
NS1A_HASV5 Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...

2 entries

Human astrovirus-8 (HAstV-8)

Select_allDeselect_all
NS1AB_HASV8 Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...
NS1A_HASV8 Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...

2 entries

Human coronavirus HKU1 (isolate N2) (HCoV-HKU1)

Select_allDeselect_all
R1A_CVHN2 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_CVHN2 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

2 entries

Human coronavirus HKU1 (isolate N5) (HCoV-HKU1)

Select_allDeselect_all
R1AB_CVHN5 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_CVHN5 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...

2 entries

Human immunodeficiency virus type 1 group M subtype A (isolate U455) (HIV-1)

Select_allDeselect_all
GAG_HV1U4 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1U4 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2) (HIV-1)

Select_allDeselect_all
GAG_HV1A2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1A2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BH5) (HIV-1)

Select_allDeselect_all
GAG_HV1B5 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1B5 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI) (HIV-1)

Select_allDeselect_all
GAG_HV1BR Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1BR Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF) (HIV-1)

Select_allDeselect_all
GAG_HV1JR Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1JR Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate LW123) (HIV-1)

Select_allDeselect_all
GAG_HV1LW Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1LW Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1)

Select_allDeselect_all
GAG_HV1N5 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1N5 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate OYI) (HIV-1)

Select_allDeselect_all
GAG_HV1OY Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1OY Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3) (HIV-1)

Select_allDeselect_all
GAG_HV1RH Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1RH Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (isolate YU-2) (HIV-1)

Select_allDeselect_all
GAG_HV1Y2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1Y2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype B (strain 89.6) (HIV-1)

Select_allDeselect_all
GAG_HV1B9 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1B9 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025) (HIV-1)

Select_allDeselect_all
GAG_HV192 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV192 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220) (HIV-1)

Select_allDeselect_all
GAG_HV1ET Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1ET Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype D (isolate NDK) (HIV-1)

Select_allDeselect_all
GAG_HV1ND Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1ND Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34) (HIV-1)

Select_allDeselect_all
GAG_HV1Z2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1Z2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020) (HIV-1)

Select_allDeselect_all
GAG_HV193 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV193 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255) (HIV-1)

Select_allDeselect_all
GAG_HV1MP Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1MP Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257) (HIV-1)

Select_allDeselect_all
GAG_HV1M2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1M2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype G (isolate 92NG083) (HIV-1)

Select_allDeselect_all
GAG_HV19N Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV19N Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype G (isolate SE6165) (HIV-1)

Select_allDeselect_all
GAG_HV1SE Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1SE Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056) (HIV-1)

Select_allDeselect_all
GAG_HV190 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV190 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype H (isolate VI991) (HIV-1)

Select_allDeselect_all
GAG_HV1V9 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1V9 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype J (isolate SE9173) (HIV-1)

Select_allDeselect_all
GAG_HV1S9 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1S9 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype J (isolate SE9280) (HIV-1)

Select_allDeselect_all
GAG_HV1S2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1S2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535) (HIV-1)

Select_allDeselect_all
GAG_HV196 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV196 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11) (HIV-1)

Select_allDeselect_all
GAG_HV197 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV197 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group N (isolate YBF106) (HIV-1)

Select_allDeselect_all
GAG_HV1YB Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1YB Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group N (isolate YBF30) (HIV-1)

Select_allDeselect_all
GAG_HV1YF Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1YF Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group O (isolate ANT70) (HIV-1)

Select_allDeselect_all
GAG_HV1AN Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1AN Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 1 group O (isolate MVP5180) (HIV-1)

Select_allDeselect_all
GAG_HV1MV Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV1MV Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype A (isolate CAM2) (HIV-2)

Select_allDeselect_all
GAG_HV2CA Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2CA Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype A (isolate D194) (HIV-2)

Select_allDeselect_all
GAG_HV2D1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2D1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype A (isolate Ghana-1) (HIV-2)

Select_allDeselect_all
GAG_HV2G1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2G1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype A (isolate KR) (HIV-2)

Select_allDeselect_all
GAG_HV2KR Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2KR Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype A (isolate NIH-Z) (HIV-2)

Select_allDeselect_all
GAG_HV2NZ Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2NZ Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype A (isolate ROD) (HIV-2)

Select_allDeselect_all
GAG_HV2RO Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2RO Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype A (isolate SBLISY) (HIV-2)

Select_allDeselect_all
GAG_HV2SB Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2SB Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype A (isolate ST) (HIV-2)

Select_allDeselect_all
GAG_HV2ST Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2ST Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype B (isolate D205) (HIV-2)

Select_allDeselect_all
GAG_HV2D2 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2D2 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype B (isolate EHO) (HIV-2)

Select_allDeselect_all
GAG_HV2EH Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2EH Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Human immunodeficiency virus type 2 subtype B (isolate UC1) (HIV-2)

Select_allDeselect_all
GAG_HV2UC Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_HV2UC Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Influenza A virus (strain A/Ann Arbor/6/1960 H2N2)

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PAX_I60A0 Protein PA-X
PA_I60A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Beijing/39/1975 H3N2)

Select_allDeselect_all
PAX_I75A0 Protein PA-X
PA_I75A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Brazil/11/1978 H1N1)

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PA_I77AA Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I77AA Protein PA-X

2 entries

Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) (Influenza A virus (strain A/South Carolina/1/1918 H1N1))

Select_allDeselect_all
PAX_I18A0 Protein PA-X
PA_I18A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Chicken/Brescia/1902 H7N7)

Select_allDeselect_all
PAX_I02A0 Protein PA-X
PA_I02A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Chicken/Hong Kong/220/1997 H5N1 genotype Gs/Gd)

Select_allDeselect_all
PA_I97A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I97A0 Protein PA-X

2 entries

Influenza A virus (strain A/Chicken/Hong Kong/31.2/2002 H5N1 genotype X1)

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PAX_I02A2 Protein PA-X
PA_I02A2 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Chicken/Hong Kong/715.5/2001 H5N1 genotype E)

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PAX_I01A3 Protein PA-X
PA_I01A3 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Chicken/Hong Kong/96.1/2002 H5N1 genotype Y)

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PA_I02A5 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I02A5 Protein PA-X

2 entries

Influenza A virus (strain A/Chicken/Hong Kong/YU22/2002 H5N1 genotype Z)

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PA_I02A6 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I02A6 Protein PA-X

2 entries

Influenza A virus (strain A/Chicken/Pennsylvania/1/1983 H5N2)

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PAX_I83A5 Protein PA-X
PA_I83A5 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Chicken/Scotland/1959 H5N1)

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PA_I59A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I59A0 Protein PA-X

2 entries

Influenza A virus (strain A/Chicken/Victoria/1/1985 H7N7)

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PAX_I85A3 Protein PA-X
PA_I85A3 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Chile/1/1983 H1N1)

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PA_I83A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I83A1 Protein PA-X

2 entries

Influenza A virus (strain A/China:Nanchang/11/1996 H1N1)

Select_allDeselect_all
PAX_I96A3 Protein PA-X
PA_I96A3 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Duck/Czechoslovakia/1956 H4N6)

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PAX_I56A1 Protein PA-X
PA_I56A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Duck/England/1/1956 H11N6)

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PA_I56A2 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I56A2 Protein PA-X

2 entries

Influenza A virus (strain A/Duck/Hokkaido/8/1980 H3N8)

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PA_I80A6 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I80A6 Protein PA-X

2 entries

Influenza A virus (strain A/Duck/Hong Kong/2986.1/2000 H5N1 genotype C)

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PA_I00A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I00A0 Protein PA-X

2 entries

Influenza A virus (strain A/England/878/1969 H3N2)

Select_allDeselect_all
PAX_I69A0 Protein PA-X
PA_I69A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Equine/London/1416/1973 H7N7)

Select_allDeselect_all
PAX_I73A4 Protein PA-X
PA_I73A4 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Equine/Tennessee/5/1986 H3N8)

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PA_I86A3 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I86A3 Protein PA-X

2 entries

Influenza A virus (strain A/Fort Monmouth/1/1947 H1N1)

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PAX_I47A0 Protein PA-X
PA_I47A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Fowl plague virus/Rostock/8/1934 H7N1)

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PA_I34A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I34A0 Protein PA-X

2 entries

Influenza A virus (strain A/Goose/Guangxi/345/2005 H5N1 genotype G)

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PA_I05A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I05A1 Protein PA-X

2 entries

Influenza A virus (strain A/Grey teal/Australia/2/1979 H4N4)

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PAX_I79A7 Protein PA-X
PA_I79A7 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Guinea fowl/Hong Kong/38/2002 H5N1 genotype X0)

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PA_I02A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I02A1 Protein PA-X

2 entries

Influenza A virus (strain A/Gull/Maryland/704/1977 H13N6)

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PA_I77AF Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I77AF Protein PA-X

2 entries

Influenza A virus (strain A/Gull/Minnesota/945/1980 H13N6)

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PAX_I80AD Protein PA-X
PA_I80AD Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Henry/1936 H1N1)

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PA_I36A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I36A0 Protein PA-X

2 entries

Influenza A virus (strain A/Hickox/1940 H1N1)

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PA_I40A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I40A0 Protein PA-X

2 entries

Influenza A virus (strain A/Hong Kong/1/1968 H3N2)

Select_allDeselect_all
PAX_I68A4 Protein PA-X
PA_I68A4 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Hong Kong/156/1997 H5N1 genotype Gs/Gd)

Select_allDeselect_all
PAX_I97A1 Protein PA-X
PA_I97A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Hong Kong/5/1983 H3N2)

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PA_I83A8 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I83A8 Protein PA-X

2 entries

Influenza A virus (strain A/India/6263/1980 H1N1)

Select_allDeselect_all
PAX_I80AA Protein PA-X
PA_I80AA Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Japan/305/1957 H2N2)

Select_allDeselect_all
PAX_I57A0 Protein PA-X
PA_I57A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Kitakyushu/159/1993 H3N2)

Select_allDeselect_all
PAX_I93A0 Protein PA-X
PA_I93A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Korea/426/1968 H2N2)

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PAX_I68A5 Protein PA-X
PA_I68A5 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Leningrad/134/17/1957 H2N2)

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PA_I57A2 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I57A2 Protein PA-X

2 entries

Influenza A virus (strain A/Leningrad/134/1957 H2N2)

Select_allDeselect_all
PAX_I57A1 Protein PA-X
PA_I57A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Leningrad/134/47/1957 H2N2)

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PA_I57A3 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I57A3 Protein PA-X

2 entries

Influenza A virus (strain A/Malaysia:Malaya/302/1954 H1N1)

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PA_I54A2 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I54A2 Protein PA-X

2 entries

Influenza A virus (strain A/Mallard/New York/6750/1978 H2N2)

Select_allDeselect_all
PAX_I78A3 Protein PA-X
PA_I78A3 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Memphis/1/1971 H3N2)

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PAX_I71A1 Protein PA-X
PA_I71A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Memphis/101/1972 H3N2)

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PA_I72A4 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I72A4 Protein PA-X

2 entries

Influenza A virus (strain A/Memphis/102/1972 H3N2)

Select_allDeselect_all
PA_I72A3 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I72A3 Protein PA-X

2 entries

Influenza A virus (strain A/Memphis/110/1976 H3N2)

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PA_I76A6 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I76A6 Protein PA-X

2 entries

Influenza A virus (strain A/Memphis/18/1978 H3N2)

Select_allDeselect_all
PAX_I78A8 Protein PA-X
PA_I78A8 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Memphis/2/1978 H3N2)

Select_allDeselect_all
PA_I78A7 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I78A7 Protein PA-X

2 entries

Influenza A virus (strain A/Memphis/4/1980 H3N2)

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PA_I80A4 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I80A4 Protein PA-X

2 entries

Influenza A virus (strain A/New Zealand:South Canterbury/35/2000 H1N1)

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PA_I00A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I00A1 Protein PA-X

2 entries

Influenza A virus (strain A/Northern Territory/60/1968 H3N2) (Influenza A virus (strain NT60)) (Influenza A virus (strain A/NT/60/1968 H3N2))

Select_allDeselect_all
PAX_I68A6 Protein PA-X
PA_I68A6 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Pintail/Alberta/119/1979 H4N6)

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PA_I79A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I79A1 Protein PA-X

2 entries

Influenza A virus (strain A/Port Chalmers/1/1973 H3N2)

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PA_I73A5 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I73A5 Protein PA-X

2 entries

Influenza A virus (strain A/Qu/7/1970 H3N2)

Select_allDeselect_all
PAX_I70A0 Protein PA-X
PA_I70A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Ruddy Turnstone/New Jersey/47/1985 H4N6)

Select_allDeselect_all
PAX_I85A7 Protein PA-X
PA_I85A7 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Russia:St.Petersburg/8/2006 H1N1)

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PA_I06A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I06A0 Protein PA-X

2 entries

Influenza A virus (strain A/Silky Chicken/Hong Kong/SF189/2001 H5N1 genotype A)

Select_allDeselect_all
PAX_I01A0 Protein PA-X
PA_I01A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Silky Chicken/Hong Kong/YU100/2002 H5N1 genotype X3)

Select_allDeselect_all
PAX_I02A4 Protein PA-X
PA_I02A4 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

1 entry

Influenza A virus (strain A/Singapore/1/1957 H2N2)

PAX_I57A5 Protein PA-X

2 entries

Influenza A virus (strain A/Swine/Colorado/1/1977 H3N2)

Select_allDeselect_all
PAX_I77A4 Protein PA-X
PA_I77A4 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Swine/Hong Kong/126/1982 H3N2)

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PA_I82A4 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I82A4 Protein PA-X

2 entries

Influenza A virus (strain A/Swine/Hong Kong/81/1978 H3N2)

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PA_I78A9 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I78A9 Protein PA-X

2 entries

Influenza A virus (strain A/Swine/Iowa/15/1930 H1N1)

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PAX_I30A0 Protein PA-X
PA_I30A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Swine/Tennessee/26/1977 H1N1)

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PA_I77AD Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I77AD Protein PA-X

2 entries

Influenza A virus (strain A/Swine/Wisconsin/1/1961 H1N1)

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PAX_I61A1 Protein PA-X
PA_I61A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Swine/Wisconsin/1/1967 H1N1)

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PAX_I67A2 Protein PA-X
PA_I67A2 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Tokyo/3/1967 H2N2)

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PAX_I67A0 Protein PA-X
PA_I67A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Turkey/Ireland/1378/1983 H5N8)

Select_allDeselect_all
PAX_I83A4 Protein PA-X
PA_I83A4 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Turkey/Minnesota/501/1978 H6N8)

Select_allDeselect_all
PAX_I78AC Protein PA-X
PA_I78AC Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Turkey/Minnesota/833/1980 H4N2)

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PAX_I80A8 Protein PA-X
PA_I80A8 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Turkey/Ontario/6118/1968 H8N4)

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PA_I68A3 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I68A3 Protein PA-X

2 entries

Influenza A virus (strain A/Turkey/Wisconsin/1/1966 H9N2)

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PA_I66A1 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I66A1 Protein PA-X

2 entries

Influenza A virus (strain A/USA:Albany/12/1951 H1N1)

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PA_I51A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I51A0 Protein PA-X

2 entries

Influenza A virus (strain A/USA:Huston/AA/1945 H1N1)

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PA_I45A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I45A0 Protein PA-X

2 entries

Influenza A virus (strain A/USA:Iowa/1943 H1N1)

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PAX_I43A0 Protein PA-X
PA_I43A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/USA:Memphis/10/1996 H1N1)

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PA_I96A2 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I96A2 Protein PA-X

2 entries

Influenza A virus (strain A/USA:Phila/1935 H1N1)

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PAX_I35A3 Protein PA-X
PA_I35A3 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/USA:Texas/UR06-0195/2007 H1N1)

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PAX_I07A0 Protein PA-X
PA_I07A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/USSR/90/1977 H1N1)

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PA_I77AB Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I77AB Protein PA-X

2 entries

Influenza A virus (strain A/Udorn/307/1972 H3N2)

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PAX_I72A2 Protein PA-X
PA_I72A2 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Influenza A virus (strain A/Wilson-Smith/1933 H1N1) (Influenza A virus (strain A/WS/1933 H1N1))

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PA_I33A0 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)
PAX_I33A0 Protein PA-X

2 entries

Influenza A virus (strain A/X-31 H3N2)

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PAX_I000X Protein PA-X
PA_I000X Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

2 entries

Jembrana disease virus (JDV)

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GAG_JEMBR Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p16 (MA); Capsid protein p26 (CA); ...
POL_JEMBR Gag-Pol polyprotein (Pr170Gag-Pol) [Cleaved into: Matrix protein p16 (MA); Capsid protein p26 (CA); ...

2 entries

Lettuce mosaic virus (strain 0 / isolate French) (LMV)

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MVP_LMV0 P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_LMV0 Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Lettuce mosaic virus (strain E) (LMV)

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MVP_LMVE P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_LMVE Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Mengo encephalomyocarditis virus

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ALT2B_ENMGO Protein 2B*
POLG_ENMGO Genome polyprotein [Cleaved into: Leader protein; Protein VP0 (VP4-VP2); Protein VP4 (P1A) (Rho) ...

2 entries

Mink astrovirus 1 (MAstV-1)

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NS1AB_MASV1 Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...
NS1A_MASV1 Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...

2 entries

Murine coronavirus (strain JHM) (MHV-JHM) (Murine hepatitis virus)

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R1A_CVMJH Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_CVMJH Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

2 entries

Ovine astrovirus 1 (OAstV-1)

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NS1A_OASV1 Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...
NS1AB_OASV1 Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...

2 entries

Papaya ringspot virus (strain P / mutant HA)

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MVP_PRSVH P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_PRSVH Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Pea seed-borne mosaic virus (strain DPD1)

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MVP_PSBMV P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_PSBMV Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Peanut mottle virus (strain M)

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MVP_PEMVM P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_PEMVM Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Pepper mottle virus (isolate California) (PeMV) (PepMoV C)

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MVP_PEMVC P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_PEMVC Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Plum pox potyvirus (isolate NAT) (PPV)

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MVP_PPVNA P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_PPVNA Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Plum pox potyvirus (strain D) (PPV)

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MVP_PPVD P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_PPVD Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Plum pox potyvirus (strain SK 68) (PPV)

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MVP_PPVSK P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_PPVSK Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Porcine reproductive and respiratory syndrome virus (isolate Pig/United States/SD 01-08/2001) (PRRSV)

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1ATF_PRRSS Truncated polyprotein 1aTF [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha papain-like cysteine ...
RPOA_PRRSS Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha ...

2 entries

Potato leafroll virus (strain Potato/Netherlands/Wageningen/1989) (PLrV)

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P1_PLRVW Protein P1 (69.7 kDa protein) (Genome-linked protein precursor) (Protein ORF1) [Cleaved into: Serine ...
RDRP_PLRVW Protein P1-P2 [Cleaved into: Serine protease (EC 3.4.21.-); RNA-directed RNA polymerase (EC ...

2 entries

Potato virus A (PVA)

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MVP_PVMA P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_PVMA Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Potato virus Y (strain Hungarian) (PVY)

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MVP_PVYHU P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_PVYHU Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Rous sarcoma virus (strain Prague C) (RSV-PrC)

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GAG_RSVP Gag-Pro polyprotein [Cleaved into: p3; Matrix protein p19; p2A; p2B; p10; Capsid protein p27; ...
POL_RSVP Gag-Pro-Pol polyprotein [Cleaved into: Matrix protein p19; p2A; p2B; p10; Capsid protein p27; p3; ...

2 entries

Rous sarcoma virus (strain Schmidt-Ruppin B) (RSV-SRB)

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GAG_RSVSB Gag-Pro polyprotein [Cleaved into: Matrix protein p19; p2A; p2B; p10; p3; Capsid protein p27; ...
POL_RSVSB Gag-Pro-Pol polyprotein [Cleaved into: Matrix protein p19; p2A; p2B; p10; Capsid protein p27; p3; ...

2 entries

Saccharomyces cerevisiae virus L-BC (ScV-L-BC) (ScVLa)

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GAG_SCVLB Major capsid protein (Gag protein) (Major coat protein)
RDRP_SCVLB Probable RNA-directed RNA polymerase (EC 2.7.7.48) (Gag-Pol protein)

1 entry

Semliki forest virus (SFV)

POLSF_SFV Frameshifted structural polyprotein (p130) [Cleaved into: Capsid protein (EC 3.4.21.90) (Coat ...

2 entries

Simian immunodeficiency virus (isolate CPZ GAB1) (SIV-cpz) (Chimpanzee immunodeficiency virus)

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GAG_SIVCZ Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVCZ Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus (isolate F236/smH4) (SIV-sm) (Simian immunodeficiency virus sooty mangabey monkey)

Select_allDeselect_all
GAG_SIVS4 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVS4 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus (isolate GB1) (SIV-mnd) (Simian immunodeficiency virus mandrill)

Select_allDeselect_all
GAG_SIVGB Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVGB Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus (isolate K6W) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

Select_allDeselect_all
GAG_SIVMK Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVMK Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus (isolate Mm142-83) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

Select_allDeselect_all
GAG_SIVM1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVM1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus (isolate PBj14/BCL-3) (SIV-sm) (Simian immunodeficiency virus sooty mangabey monkey)

Select_allDeselect_all
GAG_SIVSP Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVSP Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus agm.grivet (isolate AGM gr-1) (SIV-agm.gri) (Simian immunodeficiency virus African green monkey grivet)

Select_allDeselect_all
GAG_SIVG1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVG1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus agm.vervet (isolate AGM TYO-1) (SIV-agm.ver) (Simian immunodeficiency virus African green monkey vervet)

Select_allDeselect_all
GAG_SIVVT Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVVT Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus agm.vervet (isolate AGM155) (SIV-agm.ver) (Simian immunodeficiency virus African green monkey vervet)

Select_allDeselect_all
GAG_SIVV1 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVV1 Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Simian immunodeficiency virus agm.vervet (isolate AGM3) (SIV-agm.ver) (Simian immunodeficiency virus African green monkey vervet)

Select_allDeselect_all
GAG_SIVVG Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...
POL_SIVVG Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); ...

2 entries

Soybean mosaic virus (strain G2) (SMV)

Select_allDeselect_all
MVP_SBMVG P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_SBMVG Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Soybean mosaic virus (strain N) (SMV)

Select_allDeselect_all
MVP_SBMVN P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_SBMVN Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Tobacco etch virus (TEV)

Select_allDeselect_all
MVP_TEV P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_TEV Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Tobacco vein mottling virus (TVMV)

Select_allDeselect_all
MVP_TVMV P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_TVMV Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Turkey astrovirus 2 (TAstV-2)

Select_allDeselect_all
NS1A_TASV2 Non-structural polyprotein 1A [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...
NS1AB_TASV2 Non-structural polyprotein 1AB [Cleaved into: VPg; Protein p19; Transmembrane protein 1A; Serine ...

2 entries

Turnip mosaic virus (strain Japanese) (TuMV)

Select_allDeselect_all
MVP_TUMVJ P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_TUMVJ Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Turnip mosaic virus (strain Quebec) (TuMV)

Select_allDeselect_all
MVP_TUMVQ P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_TUMVQ Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Zucchini yellow mosaic virus (strain California) (ZYMV)

Select_allDeselect_all
MVP_ZYMVC P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_ZYMVC Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Zucchini yellow mosaic virus (strain Reunion Island) (ZYMV)

Select_allDeselect_all
MVP_ZYMVR P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_ZYMVR Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

2 entries

Zucchini yellow mosaic virus (strain Singapore) (ZYMV)

Select_allDeselect_all
MVP_ZYMVS P3N-PIPO polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper ...
POLG_ZYMVS Genome polyprotein [Cleaved into: P1 proteinase (EC 3.4.-.-) (N-terminal protein); Helper component ...

1 entry

Barley yellow dwarf virus (isolate MAV-PS1) (BYDV)

RDRP_BYDV1 Putative RNA-directed RNA polymerase (EC 2.7.7.48)

1 entry

Barley yellow dwarf virus (isolate P-PAV) (BYDV)

RDRP_BYDVR Putative RNA-directed RNA polymerase (EC 2.7.7.48)

1 entry

Human T-cell leukemia virus 1 (strain Japan MT-2 subtype A) (HTLV-1)

GAG_HTL1M Gag polyprotein (Pr53Gag) [Cleaved into: Matrix protein p19 (MA); Capsid protein p24 (CA); ...

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate CDC-451) (HIV-1)

GAG_HV1C4 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate JH32) (HIV-1)

GAG_HV1J3 Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...

1 entry

Influenza A virus (strain A/Victoria/3/1975 H3N2)

PA_I75A3 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

1 entry

Influenza B virus (strain B/Ann Arbor/1/1966 [cold-adapted])

PA_INBAC Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

1 entry

Influenza B virus (strain B/Ann Arbor/1/1966 [wild-type])

PA_INBAD Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

1 entry

Influenza B virus (strain B/Panama/45/1990)

PA_INBP9 Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

1 entry

Influenza B virus (strain B/Singapore/222/1979)

PA_INBSI Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

1 entry

Influenza C virus (strain C/JJ/1950)

PA_INCJJ Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

1 entry

Influenza C virus (strain C/Johannesburg/1/1966)

PA_INCJH Polymerase acidic protein (EC 3.1.-.-) (RNA-directed RNA polymerase subunit P2)

1 entry

Lactate dehydrogenase elevating virus (strain C) (LDV)

RPOA_LDVC Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1-alpha papain-like cysteine ...

1 entry

Lactate dehydrogenase elevating virus (strain Plagemann) (LDV)

RPOA_LDVP Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1-alpha papain-like cysteine ...

1 entry

Porcine reproductive and respiratory syndrome virus (strain 16244B) (PRRSV)

RPOA_PRRS1 Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha ...

1 entry

Porcine reproductive and respiratory syndrome virus (strain VR-2332) (PRRSV)

RPOA_PRRSR Replicase polyprotein 1ab (ORF1ab polyprotein) [Cleaved into: Nsp1 (EC 3.4.22.-); Nsp1-alpha ...

1 entry

Sheep pulmonary adenomatosis virus (Jaagsiekte sheep retrovirus) (JSRV)

VPRT_JSRV Bifunctional protease/dUTPase [Includes: Aspartic protease (EC 3.4.23.-); Deoxyuridine ...

1 entry

Simian immunodeficiency virus (isolate STM) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

GAG_SIVMS Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer ...