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T=1 icosahedral capsid protein (kw:KW-1140)


image The capsid is composed 60 asymmetric units made of 1 protein (T=1), for a total of 60 capsid proteins.

image

Icosahedric triangulation number is calculated following Caspar and Klug system

Viral molecular biology Virion
Virus entry
Transcription and replication
Host-virus interactions
Virus exit
Icosahedric capsids Virus symmetry and T number
T=1
T=2*
T=3
Pseudo T=3
T=4
T=7
T=9
T=13
T=16
T=21/pseudo T=21
T=25/pseudo T=25
T=27/pseudo T=27
T=28
T=31/pseudo T=31
T=75 bacterial carboxysome
T=169
Links

Uniprot Keyword: KW-1140
GO ontology: GO:0039615

Virus ssDNA
Circoviridae
Parvoviridae
Anelloviridae
Geminiviridae
Nanoviridae
Microviridae
dsRNA
Chrysoviridae
ssRNA+
Barnaviridae
Ourmiavirus
Bacteria Encapsulins

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

129 entries grouped by protein

129 entries

Capsid protein (Coat protein) (CP)

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CAPSD_AADNV
Aedes albopictus densovirus (isolate Boublik/1994) (AalDNV) reference strain

Capsid protein VP1/VP2 (Coat protein VP1/VP2)

CAPSD_AAV2S
Adeno-associated virus 2 (isolate Srivastava/1982) (AAV-2) reference strain

Capsid protein VP1

pdb 1LP3; 3J1S; 3J4P; 5IPI; 5IPK; 6CBE; 6E9D; 6IH9; 6IHB; 6NZ0; 6U0R; 6U0V; 7RWL; 7RWT; 8FYW; 8FZ0; 8FZN

CAPSD_ABMVW
Abutilon mosaic virus (isolate West India) (AbMV) reference strain
CAPSD_ADVG
Aleutian mink disease parvovirus (strain G) (ADV) reference strain

Capsid protein VP1

pdb 8EP2

CAPSD_AHEV
Avian hepatitis E virus (isolate Chicken/California/Meng) (AHEV) reference strain

Pro-secreted protein ORF2 (Protein ORF2) (pORF2)

CAPSD_BBTVA
Banana bunchy top virus (isolate Autralia) (BBTV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_BCTVC
Beet curly top virus (strain California/Logan) (BCTV) reference strain
CAPSD_BEYDV
Bean yellow dwarf virus (BeYDV) reference strain
CAPSD_BFDV
Beak and feather disease virus (BFDV) reference strain

Capsid protein

CAPSD_BGYMJ
Bean golden yellow mosaic virus (isolate Puerto Rico-Japan) (BGYMV) reference strain
CAPSD_BGYMV
Bean golden yellow mosaic virus (isolate Puerto Rico) (BGYMV) (Bean golden mosaic virus (isolate Puerto Rico)) reference strain
CAPSD_BPAL3
Escherichia phage alpha3 (Bacteriophage alpha-3) reference strain

Capsid protein F (F protein) (GPF)

pdb 1M06; 1M0F; 1RB8

CAPSD_BPCHP
Chlamydia phage 1 (Bacteriophage Chp1) reference strain

Capsid protein VP1 (Protein VP1) (VP1)

CAPSD_BPG4
Escherichia phage G4 (Bacteriophage G4) reference strain

Capsid protein F (F protein) (GPF)

pdb 1GFF

CAPSD_BPPHM
Bdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain

Capsid protein VP1 (VP1)

CAPSD_BPPHS
Enterobacteria phage phiX174 (Isolate Sanger) (Bacteriophage phi-X174) reference strain

Capsid protein F (F protein) (GPF)

pdb 1AL0; 1CD3; 1KVP; 2BPA

CAPSD_BPS13
Enterobacteria phage S13 (Bacteriophage S13) reference strain

Capsid protein F (F protein) (GPF)

CAPSD_CACV
Canary circovirus (CaCV) reference strain

Probable capsid protein

CAPSD_CAVC1
Chicken anemia virus (isolate Germany Cuxhaven-1) (CAV) reference strain

Capsid protein (CA1) (Coat protein)

CAPSD_CLVN
African cassava mosaic virus (isolate Nigerian) (ACMV) (Cassava latent virus (isolate Nigerian)) reference strain
CAPSD_CPVKS
Cryptosporidium parvum virus 1 (strain KSU-1) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_CSMV
Chloris striate mosaic virus (CSMV) reference strain
CAPSD_FBNY1
Faba bean necrotic yellows virus (isolate Egyptian EV1-93) (FBNYV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_FBNY2
Faba bean necrotic yellows virus (isolate Syrian SV292-88) (FBNYV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_GOCV
Goose circovirus (GoCV) reference strain

Probable capsid protein

CAPSD_HBOC1
Primate bocaparvovirus 1 (strain Human bocavirus 1 type 1) (HBoV1) (Human bocavirus type 1) reference strain

Minor capsid protein VP1 (EC 3.1.1.4)

pdb 5URF

CAPSD_HCYV5
Human associated cyclovirus 1 (isolate Homo sapiens/Pakistan/PK5510/2007) (HuCyV-1) (Cyclovirus PK5510) reference strain

Capsid protein

CAPSD_HEVCH
Hepatitis E virus genotype 1 (isolate Human/China/HeBei/1987) (HEV) reference strain

Pro-secreted protein ORF2 (Protein ORF2) (pORF2)

CAPSD_JDNVP
Junonia coenia densovirus (isolate pBRJ/1990) (JcDNV) reference strain

Capsid protein VP1 (Coat protein VP1) (Structural protein VP1)

CAPSD_MBVLF
Mushroom bacilliform virus (isolate Australia/AUS LF-1) (MBV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_MDV1
Milk vetch dwarf virus (isolate N) (MDV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_MISV9
Miscanthus streak virus (isolate 91) (MiSV) reference strain
CAPSD_MSVRA
Maize streak virus genotype D (isolate Raw) (MSV) reference strain
CAPSD_MSVS
Maize streak virus genotype A (isolate South Africa) (MSV) reference strain
CAPSD_MUMIP
Murine minute virus (strain MVM prototype) (MVM) (Murine minute virus (strain MVM(p))) reference strain

Capsid protein VP1 (Coat protein VP1)

pdb 4ZPY; 7Z5D; 7Z5E; 7Z5F

CAPSD_MYMVV
Mungbean yellow mosaic virus (strain Vigna) (MYMV) reference strain
CAPSD_OUMVV
Ourmia melon virus (isolate Melon/Iran/VE9) (OuMV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_PASVK
Panicum streak virus (isolate Kenya) (PanSV) reference strain
CAPSD_PAVBP
Bovine parvovirus 1 (BPV-1) reference strain

Minor capsid protein VP1 (EC 3.1.1.4)

CAPSD_PAVHV
Human parvovirus B19 (strain HV) (HPV B19) reference strain

Minor capsid protein VP1 (EC 3.1.1.4) (Coat protein VP1)

pdb 1S58

CAPSD_PCV1
Porcine circovirus 1 (PCV1) reference strain

Capsid protein

CAPSD_PCV2
Porcine circovirus 2 (PCV2) reference strain

Capsid protein

CAPSD_PCVC
Penicillium chrysogenum virus (isolate Caston/2003) (PcV) reference strain

Capsid protein (CP) (Coat protein)

pdb 3J3I

CAPSD_PHUV
Pepper huasteco yellow vein virus (PHYVV) (Pepper huasteco virus) reference strain
CAPSD_PYMVV
Potato yellow mosaic virus (isolate Venezuela) (PYMV) reference strain
CAPSD_SCSVF
Subterranean clover stunt virus (strain F) (SCSV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_SLCV
Squash leaf curl virus (SLCV) reference strain
CAPSD_SPV4
Spiroplasma virus 4 (SpV4) reference strain

Capsid protein VP1 (VP1)

pdb 1KVP; 9CGM

CAPSD_SSVN
Sugarcane streak virus (isolate South Africa) (SSV) (Sugarcane streak virus (isolate Natal)) reference strain
CAPSD_TASV1
Turkey astrovirus 1 (TAstV-1) reference strain

Capsid polyprotein VP90

CAPSD_TGMVY
Tomato golden mosaic virus (strain Yellow vein) (TGMV) reference strain
CAPSD_TLCVA
Tomato leaf curl virus (strain Australia) (ToLCV) reference strain
CAPSD_TPCTV
Tomato pseudo-curly top virus (TPCTV) reference strain
CAPSD_TTVA1
Torque teno virus 1 (isolate TA278) reference strain

Capsid protein

CAPSD_TTVB1
Torque teno mini virus 1 (isolate TLMV-CBD279) reference strain

Capsid protein

CAPSD_TTVD1
Torque teno tupaia virus (isolate Tbc-TTV14) reference strain

Capsid protein

CAPSD_TTVE1
Torque teno tamarin virus (isolate So-TTV2) reference strain

Capsid protein

CAPSD_TTVF1
Torque teno felis virus (isolate Fc-TTV4) reference strain

Capsid protein

CAPSD_TTVG1
Torque teno midi virus 1 (isolate MD1-073) reference strain

Capsid protein

CAPSD_TTVI1
Torque teno sus virus 1 (isolate Sd-TTV31) reference strain

Capsid protein

CAPSD_TTVT1
Torque teno canis virus (isolate Cf-TTV10) reference strain

Capsid protein

CAPSD_TTVV2
Torque teno virus (isolate Human/Japan/TRM1/1999) (TTV) (Torque teno virus genotype 1a) reference strain

Capsid protein

CAPSD_TTVV3
Torque teno virus (isolate Human/Finland/Hel32/2002) (TTV) (Torque teno virus genotype 6) reference strain

Capsid protein

CAPSD_TTVV4
Torque teno virus (isolate Human/Germany/KAV/2001) (TTV) reference strain

Capsid protein

CAPSD_TTVV5
Torque teno virus (isolate Human/Japan/SANBAN/1999) (TTV) reference strain

Capsid protein

CAPSD_TTVV6
Torque teno virus (isolate Human/China/CT23F/2001) (TTV) reference strain

Capsid protein

CAPSD_TTVV7
Torque teno virus (isolate Human/China/CT39F/2001) (TTV) reference strain

Capsid protein

CAPSD_TTVV8
Torque teno virus (isolate Chimpanzee/Japan/Pt-TTV6/2000) (TTV) reference strain

Capsid protein

CAPSD_TTVV9
Torque teno virus (isolate Japanese macaque/Japan/Mf-TTV9/2000) (TTV) reference strain

Capsid protein

CAPSD_TTVVG
Torque teno virus (isolate Human/Ghana/GH1/1996) (TTV) reference strain

Probable capsid and replication-associated protein

CAPSD_TTVZ1
Torque teno douroucouli virus (isolate At-TTV3) reference strain

Capsid protein

CAPSD_TYCSV
Tomato yellow leaf curl Sardinia virus (TYLCSV) reference strain
CAPSD_TYLCC
Tomato yellow leaf curl China virus (TYLCCNV) reference strain
CAPSD_TYLCI
Tomato yellow leaf curl virus (strain Israel) (TYLCV) reference strain
CAPSD_WCCVB
White clover cryptic virus 1 (isolate Boccardo/2004) (WCCV-1) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_WDVS
Wheat dwarf virus (isolate Sweden) (WDV) reference strain
CAPSD_AEDEV
Aedes densonucleosis virus (strain GKV 002 002) (Aedes densovirus)

Capsid protein VP1/VP2 (Coat protein VP1/VP2)

CAPSD_ANV1
Avian nephritis virus 1 (ANV-1)

Capsid polyprotein VP90

CAPSD_BPPHK
Enterobacteria phage phiK (Bacteriophage phi-K)

Capsid protein F (F protein) (GPF)

CAPSD_CALCV
Cabbage leaf curl virus (isolate Jamaica) (CaLCuV)
CAPSD_CAV26
Chicken anemia virus (isolate USA 26p4) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAV82
Chicken anemia virus (isolate Japan 82-2) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAVAU
Chicken anemia virus (isolate Australia) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAVCA
Chicken anemia virus (isolate Australia/CAU269-7/2000) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAVCI
Chicken anemia virus (isolate USA CIA-1) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CLVK
African cassava mosaic virus (isolate West Kenyan 844) (ACMV) (Cassava latent virus (isolate West Kenyan 844))

pdb 6EK5

CAPSD_DSDNV
Diatraea saccharalis densovirus (DsDNV)

Capsid protein VP1 (Coat protein VP1) (Structural protein VP1)

CAPSD_FPV
Feline panleukopenia virus (FPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_FPV19
Feline panleukopenia virus (strain 193) (FPV)

Capsid protein VP1 (Coat protein VP1)

pdb 1C8E; 1C8F; 1C8G; 1FPV

CAPSD_GMDNV
Galleria mellonella densovirus (GmDNV)

Capsid protein VP1 (Coat protein VP1) (Structural protein VP1)

pdb 1DNV

CAPSD_HBOC2
Human bocavirus 2 (HBoV2) (Human bocavirus type 2)

Minor capsid protein VP1 (EC 3.1.1.4)

CAPSD_HBOC3
Human bocavirus 3 (HBoV3) (Adelavirus W471)

Minor capsid protein VP1 (EC 3.1.1.4)

pdb 5US7

CAPSD_HBOC4
Human bocavirus 4 (HBoV4) (Human bocavirus type 4)

Minor capsid protein VP1 (EC 3.1.1.4)

pdb 5US9

CAPSD_HEVBU
Hepatitis E virus genotype 1 (isolate Human/Burma) (HEV-1)

Pro-secreted protein ORF2 (Protein ORF2) (pORF2)

pdb 2ZZQ

CAPSD_HEVCT
Hepatitis E virus genotype 4 (isolate Human/China/T1) (HEV-4) (Hepatitis E virus genotype 4 (isolate Human/China/Ct1))

Pro-secreted protein ORF2 (Protein ORF2) (pORF2)

pdb 3HAG

CAPSD_HEVHY
Hepatitis E virus genotype 1 (isolate Human/India/Hyderabad) (HEV-1)

Pro-secreted protein ORF2 (Protein ORF2) (pORF2)

CAPSD_HEVME
Hepatitis E virus genotype 2 (isolate Human/Mexico) (HEV-2)

Pro-secreted protein ORF2 (Protein ORF2) (pORF2)

CAPSD_HEVMG
Hepatitis E virus genotype 3 (isolate Swine/United States/swUS1) (HEV-3) (Hepatitis E virus genotype 3 (isolate Swine/United States/Meng))

Pro-secreted protein ORF2 (Protein ORF2) (pORF2)

CAPSD_HEVMY
Hepatitis E virus genotype 1 (isolate Human/Myanmar/HEVNE8L) (HEV-1)

Pro-secreted protein ORF2 (Protein ORF2) (pORF2)

CAPSD_HEVPA
Hepatitis E virus genotype 1 (isolate Human/Pakistan/Sar-55) (HEV-1)

Pro-secreted protein ORF2 (Protein ORF2) (pORF2)

pdb 3GGQ; 3RKD; 6LAT; 6LB0; 9IY2

CAPSD_HEVUS
Hepatitis E virus genotype 3 (isolate Human/United States/US2) (HEV-3)

Pro-secreted protein ORF2 (Protein ORF2) (pORF2)

pdb 2ZTN

CAPSD_ICMV
Indian cassava mosaic virus (ICMV)
CAPSD_MDV9
Milk vetch dwarf virus (isolate 9) (MDV)

Capsid protein (CP) (Coat protein)

CAPSD_MEVA
Mink enteritis virus (strain Abashiri) (MEV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_MSVK
Maize streak virus genotype A (isolate Kenya) (MSV)
CAPSD_MSVN
Maize streak virus genotype A (isolate Nigeria) (MSV)

pdb 8UGQ; 8UH4

CAPSD_MSVPA
Maize streak virus genotype E (isolate Pat) (MSV)
CAPSD_MSVSE
Maize streak virus genotype C (isolate Set) (MSV)
CAPSD_MSVTA
Maize streak virus genotype B (isolate Tas) (MSV)
CAPSD_MUMIM
Murine minute virus (strain MVMi) (MVM) (Murine parvovirus)

Capsid protein VP1 (Coat protein VP1)

pdb 1MVM; 1Z1C; 2XGK

CAPSD_PAVC
Canine parvovirus type 2 (CPV-2)

Capsid protein VP2 (Coat protein VP2)

CAPSD_PAVC7
Canine parvovirus type 2 (strain Dog/United States/780929/-) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVCB
Canine parvovirus type 2 (isolate Dog/United States/CPV-b/1978) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

pdb 2CAS; 6OAS; 7UTP; 7UTR; 7UTS; 7UTV

CAPSD_PAVCD
Canine parvovirustype 2 (isolate Dog/United States/CPV-d/1988) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

pdb 1C8D; 1C8H; 1IJS; 1P5W; 1P5Y; 4DPV; 7M3M; 7M3N; 7M3O

CAPSD_PAVCN
Canine parvovirus type 2 (isolate Dog/United States/CPV-N/1978) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVHH
Hamster parvovirus H1

Capsid protein VP1 (Coat protein VP1)

pdb 4G0R; 4GBT

CAPSD_PAVHU
Human parvovirus B19 (isolate AU) (HPV B19)

Minor capsid protein VP1 (EC 3.1.1.4) (Coat protein VP1)

CAPSD_PAVL3
Parvovirus LuIII

Capsid protein VP1 (Coat protein VP1)

pdb 6B9Q

CAPSD_PAVP9
Porcine parvovirus (strain 90HS) (PPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVPK
Porcine parvovirus (strain Kresse) (PPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVPN
Porcine parvovirus (strain NADL-2) (PPV)

Capsid protein VP1 (Coat protein VP1)

pdb 1K3V

CAPSD_PICV
Pigeon circovirus (PiCV) (Columbid circovirus)

Probable capsid protein

CAPSD_SCSVJ
Subterranean clover stunt virus (strain J) (SCSV)

Capsid protein (CP) (Coat protein)

CAPSD_TASV2
Turkey astrovirus 2 (TAstV-2)

Capsid polyprotein VP90

pdb 3TS3

CAPSD_TMOV
Tomato mottle virus (isolate Florida) (ToMoV)
CAPSD_TTVV1
Torque teno virus (strain VT416) (TTV)

Probable capsid and replication-associated protein

CAPSD_TYCS1
Tomato yellow leaf curl Sardinia virus (isolate Spain-1) (TYLCSV)
CAPSD_TYCS2
Tomato yellow leaf curl Sardinia virus (isolate Spain-2) (TYLCSV)
CAPSD_TYDVA
Tobacco yellow dwarf virus (strain Australia) (TYDV)