T=1 icosahedral capsid protein


T=1 icosahedral capsid is composed of 12 pentameric capsomeres for a total of 60 capsid proteins.

Icosahedric triangulation number is calculated following Caspar and Klug system (1962 PubMed)

Viral molecular biology Virion
Icosahedric capsids T=1
T=2
T=3
T=pseudo3
T=4
T=7
T=13
T=16
T=21
T=25
Links Uniprot Keyword:
GO ontology:
Virus ssDNA
Circoviridae
Parvoviridae
Anelloviridae
Geminiviridae
Nanoviridae
Microviridae
dsRNA
Partitiviridae
Chrysoviridae
ssRNA+
Astroviridae
Hepeviridae
Barnaviridae
Ourmiavirus

Matching UniProtKB/Swiss-Prot entries

130 entries grouped by protein

All proteins are shown (view only 113 complete proteome entries)

Capsid protein (Coat protein) (CP)

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CAPSD_AAV2SAdeno-associated virus 2 (isolate Srivastava/1982) (AAV-2) reference strain

Capsid protein VP1 (Coat protein VP1)

pdb 1LP3 

CAPSD_AADNVAedes albopictus densovirus (isolate Boublik/1994) (AalDNV) reference strain

Capsid protein VP1/VP2 (Coat protein VP1/VP2)

CAPSD_ADVGAleutian mink disease parvovirus (strain G) (ADV) reference strain

Capsid protein VP2 (Coat protein VP2)

CAPSD_BBTVABanana bunchy top virus (isolate Autralia) (BBTV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_BGYMJBean golden yellow mosaic virus (isolate Puerto Rico-Japan) (BGYMV) reference strain
CAPSD_BCTVCBeet curly top virus (strain California/Logan) (BCTV) reference strain
CAPSD_PAVBPBovine parvovirus (isolate pAT153/1986) (BPV) reference strain

Capsid protein VP1 (Coat protein VP1)

CAPSD_CAVC1Chicken anemia virus (isolate Germany Cuxhaven-1) (CAV) reference strain

Capsid protein (CA1) (Coat protein)

CAPSD_CPVKSCryptosporidium parvum virus 1 (strain KSU-1) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_HEVCHHepatitis E virus genotype 1 (isolate Human/China/HeBei/1987) (HEV) reference strain

Capsid protein (Protein ORF2) (pORF2)

CAPSD_HASV1Human astrovirus-1 (HAstV-1) reference strain

Capsid polyprotein

CAPSD_JDNVPJunonia coenia densovirus (isolate pBRJ/1990) (JcDNV) reference strain

Capsid protein VP1 (Coat protein VP1) (Structural protein VP1)

CAPSD_MSVSMaize streak virus genotype A (isolate South Africa) (MSV) reference strain
CAPSD_MUMIPMurine minute virus (strain MVM prototype) (MVM) (Murine minute virus (strain ... reference strain

Capsid protein VP1 (Coat protein VP1)

CAPSD_MBVLFMushroom bacilliform virus (isolate Australia/AUS LF-1) (MBV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_OUMVVOurmia melon virus (isolate Melon/Iran/VE9) (OuMV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_PCVCPenicillium chrysogenum virus (isolate Caston/2003) (PcV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_PCV1CPorcine circovirus 1 (isolate China) (PCV1) reference strain

Capsid protein

CAPSD_SCSVFSubterranean clover stunt virus (strain F) (SCSV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_TPCTVTomato pseudo-curly top virus (TPCTV) reference strain
CAPSD_TTVT1Torque teno canis virus (isolate Cf-TTV10) reference strain

Capsid protein

CAPSD_TTVZ1Torque teno douroucouli virus (isolate At-TTV3) reference strain

Capsid protein

CAPSD_TTVF1Torque teno felis virus (isolate Fc-TTV4) reference strain

Capsid protein

CAPSD_TTVG1Torque teno midi virus 1 (isolate MD1-073) reference strain

Capsid protein

CAPSD_TTVB1Torque teno mini virus 1 (isolate TLMV-CBD279) reference strain

Capsid protein

CAPSD_TTVI1Torque teno sus virus 1 (isolate Sd-TTV31) reference strain

Capsid protein

CAPSD_TTVE1Torque teno tamarin virus (isolate So-TTV2) reference strain

Capsid protein

CAPSD_TTVD1Torque teno tupaia virus (isolate Tbc-TTV14) reference strain

Capsid protein

CAPSD_TTVA1Torque teno virus 1 (isolate TA278) reference strain

Capsid protein

CAPSD_TASV1Turkey astrovirus 1 (TAstV-1) reference strain

Capsid polyprotein

CAPSD_WCCVBWhite clover cryptic virus 1 (isolate Boccardo/2004) (WCCV-1) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_ABMVWAbutilon mosaic virus (isolate West India) (AbMV)
CAPSD_AEDEVAedes densonucleosis virus (strain GKV 002 002) (Aedes densovirus)

Capsid protein VP1/VP2 (Coat protein VP1/VP2)

CAPSD_CLVNAfrican cassava mosaic virus (isolate Nigerian) (ACMV) (Cassava latent virus ...
CAPSD_CLVKAfrican cassava mosaic virus (isolate West Kenyan 844) (ACMV) (Cassava latent ...
CAPSD_AHEVAvian hepatitis E virus (isolate Chicken/California/Meng) (AHEV)

Capsid protein (Protein ORF2) (pORF2)

CAPSD_ANV1Avian nephritis virus 1 (ANV-1)

Capsid polyprotein

CAPSD_BFDVBeak and feather disease virus (BFDV)

Capsid protein

CAPSD_BGYMVBean golden yellow mosaic virus (isolate Puerto Rico) (BGYMV) (Bean golden ...
CAPSD_BEYDVBean yellow dwarf virus (BeYDV)
CAPSD_CALCVCabbage leaf curl virus (isolate Jamaica) (CaLCuV)
CAPSD_CACVCanary circovirus (CaCV)

Probable capsid protein

CAPSD_PAVCCanine parvovirus type 2 (CPV-2)

Capsid protein VP2 (Coat protein VP2)

CAPSD_PAVCNCanine parvovirus type 2 (isolate Dog/United States/CPV-N/1978) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVCBCanine parvovirus type 2 (isolate Dog/United States/CPV-b/1978) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

pdb 2CAS 

CAPSD_PAVC7Canine parvovirus type 2 (strain Dog/United States/780929/-) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVCDCanine parvovirustype 2 (isolate Dog/United States/CPV-d/1988) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

pdb 1C8D  1C8H  1IJS  1P5W  1P5Y  4DPV 

CAPSD_CAVAUChicken anemia virus (isolate Australia) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAVCAChicken anemia virus (isolate Australia/CAU269-7/2000) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAV82Chicken anemia virus (isolate Japan 82-2) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAV26Chicken anemia virus (isolate USA 26p4) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAVCIChicken anemia virus (isolate USA CIA-1) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CSMVChloris striate mosaic virus (CSMV)
CAPSD_DSDNVDiatraea saccharalis densovirus (DsDNV)

Capsid protein VP1 (Coat protein VP1) (Structural protein VP1)

CAPSD_FBNY1Faba bean necrotic yellows virus (isolate Egyptian EV1-93) (FBNYV)

Capsid protein (CP) (Coat protein)

CAPSD_FBNY2Faba bean necrotic yellows virus (isolate SV292-88) (FBNYV)

Capsid protein (CP) (Coat protein)

CAPSD_FPVFeline panleukopenia virus (FPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_FPV19Feline panleukopenia virus (strain 193) (FPV)

Capsid protein VP1 (Coat protein VP1)

pdb 1C8E  1C8F  1C8G  1FPV 

CAPSD_GMDNVGalleria mellonella densovirus (GmDNV)

Capsid protein VP1 (Coat protein VP1) (Structural protein VP1)

pdb 1DNV 

CAPSD_GOCVGoose circovirus (GoCV)

Probable capsid protein

CAPSD_PAVHHHamster parvovirus H1

Capsid protein VP1 (Coat protein VP1)

CAPSD_HEVBUHepatitis E virus genotype 1 (isolate Human/Burma) (HEV-1)

Capsid protein (Protein ORF2) (pORF2)

pdb 2ZZQ 

CAPSD_HEVHYHepatitis E virus genotype 1 (isolate Human/India/Hyderabad) (HEV-1)

Capsid protein (Protein ORF2) (pORF2)

CAPSD_HEVMYHepatitis E virus genotype 1 (isolate Human/Myanmar/HEVNE8L) (HEV-1)

Capsid protein (Protein ORF2) (pORF2)

CAPSD_HEVPAHepatitis E virus genotype 1 (isolate Human/Pakistan/Sar-55) (HEV-1)

Capsid protein (Protein ORF2) (pORF2)

pdb 3GGQ  3RKD 

CAPSD_HEVMEHepatitis E virus genotype 2 (isolate Human/Mexico) (HEV-2)

Capsid protein (Protein ORF2) (pORF2)

CAPSD_HEVUSHepatitis E virus genotype 3 (isolate Human/United States/US2) (HEV-3)

Capsid protein (Protein ORF2) (pORF2)

CAPSD_HEVMGHepatitis E virus genotype 3 (isolate Swine/United States/swUS1) (HEV-3) ...

Capsid protein (Protein ORF2) (pORF2)

CAPSD_HEVCTHepatitis E virus genotype 4 (isolate Human/China/T1) (HEV-4) (Hepatitis E ...

Capsid protein (Protein ORF2) (pORF2)

pdb 3HAG 

CAPSD_HASV2Human astrovirus-2 (HAstV-2)

Capsid polyprotein

CAPSD_HASV3Human astrovirus-3 (HAstV-3)

Capsid polyprotein

CAPSD_HASV4Human astrovirus-4 (HAstV-4)

Capsid polyprotein

CAPSD_HASV5Human astrovirus-5 (HAstV-5)

Capsid polyprotein

CAPSD_HASV6Human astrovirus-6 (HAstV-6)

Capsid polyprotein

CAPSD_HASV7Human astrovirus-7 (HAstV-7)

Capsid polyprotein

CAPSD_HASV8Human astrovirus-8 (HAstV-8)

Capsid polyprotein

pdb 3QSQ 

CAPSD_PAVHUHuman parvovirus B19 (isolate AU) (HPV B19)

Capsid protein VP1 (Coat protein VP1)

CAPSD_ICMVIndian cassava mosaic virus (ICMV)
CAPSD_MSVKMaize streak virus genotype A (isolate Kenya) (MSV)
CAPSD_MSVNMaize streak virus genotype A (isolate Nigeria) (MSV)
CAPSD_MSVTAMaize streak virus genotype B (isolate Tas) (MSV)
CAPSD_MSVSEMaize streak virus genotype C (isolate Set) (MSV)
CAPSD_MSVRAMaize streak virus genotype D (isolate Raw) (MSV)
CAPSD_MSVPAMaize streak virus genotype E (isolate Pat) (MSV)
CAPSD_MDV9Milk vetch dwarf virus (isolate 9) (MDV)

Capsid protein (CP) (Coat protein)

CAPSD_MDV1Milk vetch dwarf virus (isolate N) (MDV)

Capsid protein (CP) (Coat protein)

CAPSD_MASV1Mink astrovirus 1 (MAstV-1)

Capsid polyprotein

CAPSD_MEVAMink enteritis virus (strain Abashiri) (MEV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_MISV9Miscanthus streak virus (isolate 91) (MiSV)
CAPSD_MYMVVMungbean yellow mosaic virus (strain Vigna) (MYMV)
CAPSD_MUMIMMurine minute virus (strain MVMi) (MVM) (Murine parvovirus)

Capsid protein VP1 (Coat protein VP1)

pdb 1MVM  1Z1C  2XGK 

CAPSD_OASV1Ovine astrovirus 1 (OAstV-1)

Capsid polyprotein

CAPSD_PASVKPanicum streak virus (isolate Kenya) (PanSV)
CAPSD_PAVL3Parvovirus LuIII

Capsid protein VP1 (Coat protein VP1)

CAPSD_PHUVPepper huasteco yellow vein virus (PHYVV) (Pepper huasteco virus)
CAPSD_PICVPigeon circovirus (PiCV) (Columbid circovirus)

Probable capsid protein

CAPSD_PASV1Porcine astrovirus 1 (PAstV-1)

Capsid polyprotein

CAPSD_PCV2Porcine circovirus 2 (PCV2)

Capsid protein

CAPSD_PAVP9Porcine parvovirus (strain 90HS) (PPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVPKPorcine parvovirus (strain Kresse) (PPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVPNPorcine parvovirus (strain NADL-2) (PPV)

Capsid protein VP1 (Coat protein VP1)

pdb 1K3V 

CAPSD_PYMVVPotato yellow mosaic virus (isolate Venezuela) (PYMV)
CAPSD_SLCVSquash leaf curl virus (SLCV)
CAPSD_SCSVJSubterranean clover stunt virus (strain J) (SCSV)

Capsid protein (CP) (Coat protein)

CAPSD_SSVNSugarcane streak virus (isolate South Africa) (SSV) (Sugarcane streak virus ...
CAPSD_TYDVATobacco yellow dwarf virus (strain Australia) (TYDV)
CAPSD_TGMVYTomato golden mosaic virus (strain Yellow vein) (TGMV)
CAPSD_TLCVATomato leaf curl virus (strain Australia) (ToLCV)
CAPSD_TMOVTomato mottle virus (isolate Florida) (ToMoV)
CAPSD_TYLCCTomato yellow leaf curl China virus (TYLCCNV)
CAPSD_TYCSVTomato yellow leaf curl Sardinia virus (TYLCSV)
CAPSD_TYCS1Tomato yellow leaf curl Sardinia virus (isolate Spain-1) (TYLCSV)
CAPSD_TYCS2Tomato yellow leaf curl Sardinia virus (isolate Spain-2) (TYLCSV)
CAPSD_TYLCITomato yellow leaf curl virus (strain Israel) (TYLCV)
CAPSD_TTVV8Torque teno virus (isolate Chimpanzee/Japan/Pt-TTV6/2000) (TTV)

Capsid protein

CAPSD_TTVV6Torque teno virus (isolate Human/China/CT23F/2001) (TTV)

Capsid protein

CAPSD_TTVV7Torque teno virus (isolate Human/China/CT39F/2001) (TTV)

Capsid protein

CAPSD_TTVV3Torque teno virus (isolate Human/Finland/Hel32/2002) (TTV) (Torque teno virus ...

Capsid protein

CAPSD_TTVV4Torque teno virus (isolate Human/Germany/KAV/2001) (TTV)

Capsid protein

CAPSD_TTVVGTorque teno virus (isolate Human/Ghana/GH1/1996) (TTV)

Probable capsid and replication-associated protein

CAPSD_TTVV5Torque teno virus (isolate Human/Japan/SANBAN/1999) (TTV)

Capsid protein

CAPSD_TTVV2Torque teno virus (isolate Human/Japan/TRM1/1999) (TTV) (Torque teno virus ...

Capsid protein

CAPSD_TTVV9Torque teno virus (isolate Japanese macaque/Japan/Mf-TTV9/2000) (TTV)

Capsid protein

CAPSD_TTVV1Torque teno virus (strain VT416) (TTV)

Probable capsid and replication-associated protein

CAPSD_TASV2Turkey astrovirus 2 (TAstV-2)

Capsid polyprotein

pdb 3TS3 

CAPSD_WDVSWheat dwarf virus (isolate Sweden) (WDV)

Capsid protein VP1 (VP1)

Select_all Deselect_all  
F_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain
F_BPCHPChlamydia phage 1 (Bacteriophage Chp1) reference strain

Capsid protein VP1 (Protein VP1) (VP1)

F_SPV4Spiroplasma virus 4 (SpV4) reference strain

pdb 1KVP 

F_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Capsid protein F (F protein) (GPF)

pdb 1AL0  1CD3  1KVP  1PHX  2BPA 

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