Microviridae

Molecular biology

VIRION

Non-enveloped, round, icosahedral symmetry (T=1), about 30 nm in diameter. The capsid consists of 12 pentagonal trumpet-shaped pentomers. The virion is composed of 60 copies each of the F, G, and J proteins, and 12 copies of the H protein. There are 12 spikes which are each composed of 5 G and one H proteins.


GENOME

Linear, single-stranded DNA of 4.4 to 6.1kb. replication occurs via dsDNA intermediate and rolling circle.

GENE EXPRESSION

Early and late genes promoters tightly regulates the timing of gene expression, which is crutial for the replication cycle.

REPLICATION

CYTOPLASMIC

  1. Virus particle binds to target cell.
  2. The proteins of the capsid inject the DNA core into cell cytoplasm.
  3. Host polymerase convert the (+)ssDNA viral genome into a covalently closed dsDNA called replicative form DNA I (RFI).
  4. Early viral genes are transcribed by host RNA polymerase, producing viral replication proteins.
  5. Viral protein A cleaves RFI DNA strand at the origin of replication and covalently attaches itself to the DNA, generating RFII molecule.
  6. (+)strand replication occurs by rolling circle, which is converted to dsDNA by host polymerase.
  7. Late viral genes are transcribed by host RNA polymerase.
  8. Procapsid assembly in the cytoplasm.
  9. Viral protein C binds to replication complex, inducing packaging of neo-synthesized (+)DNA into procapsids.
  10. Procapsids are matured in host cytoplasm
  11. Viral lysozyme attacks the peptidoglycan wall, lysing the cell and releasing mature virions.

Matching UniProtKB/Swiss-Prot entries

78 entries grouped by protein

All proteins are shown (view only 68 complete proteome entries)

Internal scaffolding protein VP3

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B_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain
B_BPCHPChlamydia phage 1 (Bacteriophage Chp1) reference strain

Internal scaffolding protein VP3 (Protein VP3) (VP3)

B_SPV4Spiroplasma virus 4 (SpV4) reference strain

Internal scaffolding protein ORF3

B_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Internal scaffolding protein B (GPB)

Protein ORF5

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C_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain

Protein VP5

C_BPCHPChlamydia phage 1 (Bacteriophage Chp1) reference strain
C_SPV4Spiroplasma virus 4 (SpV4) reference strain
C_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Protein C

External scaffolding protein D (GPD)


D_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Lysis protein E (Protein E) (GPE)


E_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Capsid protein VP1 (VP1)

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F_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain
F_BPCHPChlamydia phage 1 (Bacteriophage Chp1) reference strain

Capsid protein VP1 (Protein VP1) (VP1)

F_SPV4Spiroplasma virus 4 (SpV4) reference strain
F_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Capsid protein F (F protein) (GPF)

Major spike protein G (G protein) (GPG)

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G_BPG4Enterobacteria phage G4 (Bacteriophage G4)
G_BPS13Enterobacteria phage S13 (Bacteriophage S13)
G_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
G_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)
G_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Minor spike protein H (H protein) (Pilot protein) (Protein VP2) (VP2)

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H_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain
H_BPCHPChlamydia phage 1 (Bacteriophage Chp1) reference strain
H_SPV4Spiroplasma virus 4 (SpV4) reference strain

Minor spike protein H (H protein) (Pilot protein)

H_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Minor spike protein H (H protein) (Pilot protein)

DNA binding protein ORF8

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J_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain

DNA binding protein VP8

J_BPCHPChlamydia phage 1 (Bacteriophage Chp1) reference strain
J_SPV4Spiroplasma virus 4 (SpV4) reference strain
J_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

DNA-binding protein J (Small core protein)

Protein K


K_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Uncharacterized protein N


N_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain

Uncharacterized protein ORF6

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ORF6_BPCHPChlamydia phage 1 (Bacteriophage Chp1) reference strain
ORF6_SPV4Spiroplasma virus 4 (SpV4) reference strain

Uncharacterized protein ORF7

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ORF7_BPCHPChlamydia phage 1 (Bacteriophage Chp1) reference strain
ORF7_SPV4Spiroplasma virus 4 (SpV4) reference strain

Uncharacterized protein ORF9


ORF9_SPV4Spiroplasma virus 4 (SpV4) reference strain

Replication-associated protein VP4 (Rep) (VP4) (EC 3.1.21.-) (EC 6.5.1.1)

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REP_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain
REP_BPCHPChlamydia phage 1 (Bacteriophage Chp1) reference strain

Replication-associated protein ORF4 (EC 3.1.21.-) (EC 6.5.1.1) (Rep)

REP_SPV4Spiroplasma virus 4 (SpV4) reference strain

Replication-associated protein ORF2 (EC 3.1.21.-) (EC 6.5.1.1) (Rep)

Replication-associated protein A (EC 3.1.21.-) (EC 6.5.1.1) (RepA)


REPA_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

A protein (GPA)

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VGA_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGA_BPS13Enterobacteria phage S13 (Bacteriophage S13)

A' protein (GPA)

VGA_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGA_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Scaffolding protein B (GPB)

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VGB_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGB_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGB_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGB_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

C protein

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VGC_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGC_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGC_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGC_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Scaffolding protein D (GPD)

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VGD_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGD_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGD_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGD_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Lysis protein (E protein) (GPE)

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VGE_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGE_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGE_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGE_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Capsid protein (F protein) (GPF)

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VGF_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGF_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGF_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGF_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Minor spike protein (H protein) (Pilot protein)

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VGH_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGH_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGH_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGH_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Small core protein (J protein)

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VGJ_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGJ_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGJ_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGJ_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

K protein

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VGK_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGK_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGK_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGK_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Uncharacterized protein W


W_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain

Uncharacterized protein X


X_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain

Uncharacterized protein Y


Y_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain

Uncharacterized protein Z


Z_BPPHMBdellovibrio phage phiMH2K (Bacteriophage phiMH2K) reference strain