Closteroviridae

Molecular biology

VIRION

Non-enveloped, flexuous and exceptionally long, filamentous particles about 950-2200 nm in length and 10-13 nm in diameter. The virion body is assembled by the major capsid protein (CP) and the tail by the minor capsid protein (CPm).

GENOME

Mono-(Ampelovirus, Closterovirus) or bi-partite (Crinivirus), linear, ssRNA(+) genome of 15 to 20 kb. 3’ terminus has no poly(A) tract and the 5’ terminus probably has a methylated nucleotide cap.

GENE EXPRESSION

The virion RNA is infectious and serves as both the genome and viral messenger RNA. An alternative ribosomal frameshift at the end of ORF1a produces the RdRp ORF1ab protein. Other ORFs are translated from a set of nested 3’ co-terminal subgenomic RNAs.

REPLICATION

CYTOPLASMIC

  1. Virus penetrates into the host cell.
  2. Uncoating, and release of the viral genomic RNA into the cytoplasm.
  3. The viral RNA is translated.
  4. Negative-sense complementary ssRNAs are synthesized using the genomic RNAs as a templates.
  5. New genomic RNAs are synthesized using the negative-sense RNAs as templates.
  6. Formation of new virus particles.

Matching UniProtKB/Swiss-Prot entries

31 entries grouped by protein

All proteins are shown (view only 30 complete proteome entries)

Capsid protein (CP) (Coat protein)

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CAPSD_BYVUBeet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain

Capsid protein (CP) (p22)

CAPSD_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain
CAPSD_LIYV9Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain
CAPSD_CTV36Citrus tristeza virus (isolate T36) (CTV)

Minor capsid protein (CPm)

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CPM_BYVUBeet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain

Minor capsid protein (CPm) (p24)

CPM_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain
CPM_LIYV9Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain

Movement protein Hsp70h (Heat shock protein 70 homolog) (Hsp70h)


MVP_LIYV9Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain

Movement protein Hsp70h (Heat shock protein 70 homolog) (Hsp70h)

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MVP1_BYVUBeet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain
MVP1_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain

Movement protein p6 (6 kDa protein) (p6)

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MVP2_BYVUBeet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain
MVP2_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain

Movement protein p5 (5 kDa protein) (Protein P5)

20 kDa protein (p20)


P20_BYVUBeet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain

Protein P20A (19.6 kDa protein)


P20A_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain

Protein P20B (19.7 kDa protein)


P20B_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain

RNA silencing suppressor (21 kDa protein) (p21)

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P21_BYVUBeet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain
P21_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain

Protein P21 (21 kDa protein)

Protein p26


P26_LIYV9Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain

RNA-binding P34 protein (P34)


P34_LIYV9Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain

Protein P4 (4 kDa protein)


P4_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain

Protein P55


P55_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain

Protein p59


P59_LIYV9Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain

Uncharacterized 6 kDa protein (p6)


P6_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain

64 kDa protein (p64)


P64_BYVUBeet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain

Protein P7 (7 kDa protein)


P7_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain

Protein P9


P9_LIYV9Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain

Replicase protein 1a

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R1A_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain
R1A_LIYV9Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain

Replicase polyprotein 1a

Replicase polyprotein 1ab

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R1AB_BYVUBeet yellows virus (isolate Ukraine) (BYV) (Sugar beet yellows virus) reference strain
R1AB_GLRV3Grapevine leafroll-associated virus 3 (isolate United States/NY1) (GLRaV-3) ... reference strain
R1AB_LIYV9Lettuce infectious yellows virus (isolate United States/92) (LIYV) reference strain