Lederbergvirus (taxid:186794)

VIRION

Non-enveloped, head-tail structure. The capsid is about 60-65 nm in diameter, with a T=7 laevo icosahedral symmetry . The tail is non-contractile, has 6 prominent tail spikes.
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GENOME

Linear, dsDNA genome of about 41 kb encoding for at least 55 genes.

GENE EXPRESSION

REPLICATION

CYTOPLASMIC

  1. Adsorption: the phage attaches to the target cell through its tail fibers.
  2. Ejection of the viral DNA into host cell cytoplasm.
  3. Transcription and translation of early genes.
  4. Replication of genomic DNA. Transcription and translation of late genes.
  5. Assembly of an empty procapsid and packaging of the genome.
  6. Viral tail fibers assembly and viral tail assembly.
  7. Mature virions are released from the cell by lysis.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

74 entries grouped by protein

1 entry

Anti-RecBCD protein 1 (Protein abc1)

ABC1_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Anti-RecBCD protein 2 (Protein abc2)

ABC2_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Major capsid protein (Gene product 5) (gp5) (Major head protein)

CAPSD_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Decoration protein (Dec)

DECO_BPST6
Salmonella phage ST64T (Bacteriophage ST64T) reference strain

1 entry

Ead protein

EAD_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Endolysin (EC 3.2.1.17) (Lysis protein) (Lysozyme) (Muramidase)

ENLYS_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Essential recombination function protein

ERF_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Peptidoglycan hydrolase gp4 (Gene product 4) (Gp4) (Internal virion protein gp4) (Tail adapter protein gp4)

EXLYS_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

2 entries

Tail spike protein (TSP) (Endo-1,3-alpha-L-rhamnosidase) (EC 3.2.1.-) (Endorhamnosidase)

Select_allDeselect_all
FIBER_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

Tail spike protein (TSP) (Endo-1,3-alpha-L-rhamnosidase) (EC 3.2.1.-) (Endorhamnosidase) (Gene product 9) (gp9)

FIBER_BPSFV
Shigella phage Sf6 (Shigella flexneri bacteriophage VI) (Bacteriophage SfVI)

1 entry

Internal virion protein gp16 (Ejection protein gp16) (E protein gp16)

GP16_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Internal virion protein gp20 (Ejection protein gp20) (E protein gp20)

GP20_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Internal virion protein gp7 (Ejection protein gp7) (E protein gp7)

GP7_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Bactoprenol-linked glucose translocase

GTRA_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Bactoprenol glucosyl transferase (EC 2.4.1.-)

GTRB_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Antiholin (Lysis inhibitor 13-108)

HOLIN_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Tail needle protein gp26 (Head completion protein) (Packaged DNA stabilization protein) (Tail accessory factor gp26)

NEEDL_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Protein ninB

NINB_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Protein ninD

NIND_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Protein ninE

NINE_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Protein ninF

NINF_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Protein ninG

NING_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Protein ninH

NINH_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Putative protein ninX

NINX_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Putative protein ninY

NINY_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

O-acetyl transferase (EC 2.3.1.-) (O-antigen acetylase)

OAC_BPSFV
Shigella phage Sf6 (Shigella flexneri bacteriophage VI) (Bacteriophage SfVI)

1 entry

Portal protein (Gene product 1) (Gp1) (Head-to-tail connector)

PORTL_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Restriction inhibitor protein ral (Antirestriction protein)

RAL_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Antirepressor protein ant

RANT_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Transcriptional repressor arc

RARC_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Regulatory protein cro (Antirepressor)

RCRO_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Probable regulatory protein N

REGN_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Antitermination protein Q

REGQ_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Regulatory protein mnt

RMNT_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Transcriptional activator protein C1

RPC1_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Repressor protein C2

RPC2_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Regulatory protein C3 (CIII)

RPC3_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Superinfection exclusion protein A

SIEA_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Superinfection exclusion protein B

SIEB_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Spanin, inner membrane subunit (i-spanin) (Gene product 15) (Gp15) (Lysis protein Rz)

SPAN1_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Probable spanin, outer lipoprotein subunit (o-spanin) (Rz1 protein)

SPAN2_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Terminase, large subunit (DNA-packaging protein gp2)

TERL_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

2 entries

Terminase, small subunit (DNA-packaging protein gp3)

Select_allDeselect_all
TERS_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain
TERS_BPLP7
Enterobacteria phage LP7 (Bacteriophage LP7)

1 entry

Accessory recombination function protein

VARF_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Eaa protein

VEAA_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Eac protein

VEAC_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Eae protein

VEAE_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Eaf protein

VEAF_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Eag protein

VEAG_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Eai protein

VEAI_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

2 entries

DNA transfer protein gp7

Select_allDeselect_all
VG07_BPHK6
Enterobacteria phage HK620 (Bacteriophage HK620) reference strain
VG07_BPST6
Salmonella phage ST64T (Bacteriophage ST64T) reference strain

1 entry

Scaffolding protein (Protein gp8)

VG08_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Packaged DNA stabilization protein gp10

VG10_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Replicative DNA helicase (EC 3.6.4.12) (Replication protein gp12)

VG12_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Protein gp14

VG14_BPP22
Salmonella phage P22 (Bacteriophage P22)

1 entry

Superinfection exclusion protein (Protein gp17)

VG17_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

DNA replication protein gp18

VG18_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

2 entries

Integrase (EC 2.7.7.-) (EC 3.1.-.-)

Select_allDeselect_all
VINT_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain
VINT_BPSFV
Shigella phage Sf6 (Shigella flexneri bacteriophage VI) (Bacteriophage SfVI)

1 entry

Protein kil

VKIL_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

3 entries

Probable excisionase hkaC

Select_allDeselect_all
VXIS_BPHK6
Enterobacteria phage HK620 (Bacteriophage HK620) reference strain
VXIS_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

Excisionase

VXIS_BPSFV
Shigella phage Sf6 (Shigella flexneri bacteriophage VI) (Bacteriophage SfVI) reference strain

1 entry

Uncharacterized 22.8 kDa protein in gp15-gp3 intergenic region (ORF201)

Y23K_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Uncharacterized 55.3 kDa protein in gtrB 5'region (ORF485)

Y55K_BPP22
Salmonella phage P22 (Bacteriophage P22)

1 entry

Uncharacterized 6.4 kDa protein in sieA-mnt intergenic region (ORF59A)

Y6K4_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Uncharacterized 6.6 kDa protein in eae-abc2 intergenic region (ORF56)

Y6K6_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Uncharacterized 7.7 kDa protein in gp5-gp4 intergenic region (ORF 109) (ORF69)

Y7K7_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Uncharacterized 7.8 kDa protein in ral-gp17 intergenic region (ORF67)

Y7K8_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Uncharacterized 8.6 kDa protein in ral-gp17 intergenic region (ORF78)

Y8K6_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Uncharacterized 9.0 kDa protein in gp15-gp3 intergenic region (ORF80)

Y9K0_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain

1 entry

Uncharacterized 5.8 kDa protein (ORF48)

YO48_BPP22
Salmonella phage P22 (Bacteriophage P22) reference strain