Microvirus

Molecular biology

VIRION

Non-enveloped, round, icosahedral symmetry (T=1), about 30 nm in diameter. The capsid consists of 12 pentagonal trumpet-shaped pentomers. The virion is composed of 60 copies each of the F, G, and J proteins, and 12 copies of the H protein. There are 12 spikes which are each composed of 5 G and one H proteins.


GENOME

Circular, single-stranded DNA of 4.4 to 6.1kb. replication occurs via dsDNA intermediate and rolling circle.

GENE EXPRESSION

Early and late genes promoters tightly regulates the timing of gene expression, which is crutial for the replication cycle.

REPLICATION

CYTOPLASMIC

  1. Virus particle binds to target cell via lipopolysaccharides (LPS).
  2. The proteins of the capsid inject the DNA core into cell cytoplasm.
  3. Host polymerase convert the (+)ssDNA viral genome into a covalently closed dsDNA called replicative form DNA I (RFI).
  4. Early viral genes are transcribed by host RNA polymerase, producing viral replication proteins.
  5. Viral protein A cleaves RFI DNA strand at the origin of replication and covalently attaches itself to the DNA, generating RFII molecule.
  6. (+)strand replication occurs by rolling circle, which is converted to dsDNA by host polymerase.
  7. Late viral genes are transcribed by host RNA polymerase.
  8. Procapsid assembly in the cytoplasm.
  9. Viral protein C binds to replication complex, inducing packaging of neo-synthesized (+)DNA into procapsids.
  10. Procapsids are matured in host cytoplasm
  11. Viral lysozyme attacks the peptidoglycan wall, lysing the cell and releasing mature virions.

Matching UniProtKB/Swiss-Prot entries

50 entries grouped by protein

All proteins are shown (view only 40 complete proteome entries)

Internal scaffolding protein B (GPB)


B_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Protein C


C_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

External scaffolding protein D (GPD)


D_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Lysis protein E (Protein E) (GPE)


E_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Capsid protein F (F protein) (GPF)


F_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Major spike protein G (G protein) (GPG)

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G_BPG4Enterobacteria phage G4 (Bacteriophage G4)
G_BPS13Enterobacteria phage S13 (Bacteriophage S13)
G_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
G_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)
G_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Minor spike protein H (H protein) (Pilot protein)


H_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

DNA-binding protein J (Small core protein)


J_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Protein K


K_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

Replication-associated protein A (EC 3.1.21.-) (EC 6.5.1.1) (RepA)


REPA_BPPHXEnterobacteria phage phiX174 (Bacteriophage phi-X174)

A protein (GPA)

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VGA_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGA_BPS13Enterobacteria phage S13 (Bacteriophage S13)

A' protein (GPA)

VGA_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGA_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Scaffolding protein B (GPB)

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VGB_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGB_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGB_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGB_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

C protein

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VGC_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGC_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGC_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGC_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Scaffolding protein D (GPD)

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VGD_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGD_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGD_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGD_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Lysis protein (E protein) (GPE)

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VGE_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGE_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGE_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGE_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Capsid protein (F protein) (GPF)

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VGF_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGF_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGF_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGF_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Minor spike protein (H protein) (Pilot protein)

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VGH_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGH_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGH_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGH_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

Small core protein (J protein)

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VGJ_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGJ_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGJ_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGJ_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)

K protein

Select_all Deselect_all  
VGK_BPG4Enterobacteria phage G4 (Bacteriophage G4)
VGK_BPS13Enterobacteria phage S13 (Bacteriophage S13)
VGK_BPAL3Enterobacteria phage alpha3 (Bacteriophage alpha-3)
VGK_BPPHKEnterobacteria phage phiK (Bacteriophage phi-K)