Tymovirus

Molecular biology

VIRION

Non-enveloped, isometric, icosahedral, about 30 nm in diameter.

GENOME

Linear, C-rich, ssRNA(+) genome of 6.3 kb. The 3’-terminus has a tRNA-like structure.

GENE EXPRESSION

The virion RNA is infectious and serves as both the genome and viral messenger RNA. The genomic RNA encodes a large replication protein which is cleaved and the movement protein from two overlaping ORFs. The single capsid protein is translated from a 3’-coterminal subgenomic RNA.

REPLICATION

  1. Virus penetrates into the host cell.
  2. Uncoating, and release of the viral genomic RNA into the cytoplasm.
  3. The viral RNA is translated to produce the proteins necessary for RNA synthesis (replication and transcription).
  4. A negative-sense complementary ssRNA is synthesized using the genomic RNA as a template.
  5. New genomic RNA is synthesized using the negative-sense RNA as a template.
  6. The RdRp recognizes internal subgenomic promoters on the negative-sense RNA to transcribe the 3’co-terminal subgenomic RNA that will generate the capsid protein.
  7. Formation of new virus particles.

Matching UniProtKB/Swiss-Prot entries

22 entries grouped by protein

All proteins are shown (view only 12 complete proteome entries)

Coat protein (Virion protein)

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COAT_TYMVTurnip yellow mosaic virus reference strain
COAT_BMDVBelladonna mottle virus (BMDV)
COAT_CAYMVCacao yellow mosaic virus
COAT_EPMVEggplant mosaic virus
COAT_ELVErysimum latent virus (ELV)
COAT_KYMVJKennedya yellow mosaic virus (strain Jervis bay) (KYMV)
COAT_OYMVOnonis yellow mosaic virus
COAT_PHMVPhysalis mottle virus (PhMV) (Belladonna mottle virus-Iowa)
COAT_TYMVATurnip yellow mosaic virus (isolate Australia)

69 kDa protein (p69)

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P69_TYMVTurnip yellow mosaic virus reference strain
P69_EPMVEggplant mosaic virus

70 kDa protein

P69_OYMVOnonis yellow mosaic virus

66 kDa protein

P69_TYMVATurnip yellow mosaic virus (isolate Australia)
P69_TYMVCTurnip yellow mosaic virus (isolate TYMC)

RNA replicase polyprotein (EC 2.7.7.48)

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POLR_TYMVTurnip yellow mosaic virus reference strain
POLR_EPMVEggplant mosaic virus
POLR_ELVErysimum latent virus (ELV)
POLR_KYMVJKennedya yellow mosaic virus (strain Jervis bay) (KYMV)
POLR_OYMVOnonis yellow mosaic virus
POLR_TYMVATurnip yellow mosaic virus (isolate Australia)
POLR_TYMVCTurnip yellow mosaic virus (isolate TYMC)

Uncharacterized 48 kDa protein


Y48K_ELVErysimum latent virus (ELV)