Aquareovirus

Molecular biology

VIRION

Non enveloped, icosahedral virion with a double capsid structure, about 75 nm in diameter. Pentameric turrets sit on the outside of the innermost capsid. The outer capsid has an icosahedral T=13 symmetry, the inner capsid an icosahedral symmetry T=2.

GENOME

Segmented dsRNA linear genome. Contains 11 segments coding for 12 proteins. Segments size range from 0.8 to 4.0 kb. Genome total size range from 18.2 to 30.5 kb.

GENE EXPRESSION

The dsRNA genome is never completely uncoated, to prevent activation of antiviral state by the cell in response of dsRNA. Viral polymerase synthesizes mRNA from each dsRNA segment which are translocated to the cell cytoplasm where they are translated.

REPLICATION

CYTOPLASMIC

  1. Virus attaches to host receptors and is endocytosed into vesicles in the host cell.
  2. Particles are partially uncoated in endolysosomes, but not entirely, and penetrates in the cytoplasm.
  3. Early transcription of the dsRNA genome by viral polymerase occurs inside this sub-viral particle (naked core), so that dsRNA is never exposed to the cytoplasm. Full-length plus-strand transcripts from each of the dsRNA segments are synthesized. These plus-strand transcripts are used as templates for translation.
  4. (+)RNAs are encapsidated in a sub-viral particle, inside which they are transcribed to give RNA (-) molecules with which they become base-paired to produce dsRNA genomes.
  5. The capsid is assembled on the sub-viral particle.
  6. Mature virions are released presumably following cell death and associated breakdown of host plasma membrane.

Matching UniProtKB/Swiss-Prot entries

27 entries grouped by protein

All proteins are shown (view only 24 complete proteome entries)

Major inner capsid protein VP3 (EC 3.6.4.13) (ATP-dependent DNA helicase VP3)

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CAPSD_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
CAPSD_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain
CAPSD_AQRVAAquareovirus A (isolate Chum salmon/Japan/CSRV/1981) (AQRV-A)

RNA-directed RNA polymerase VP2 (EC 2.7.7.48)

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RDRP_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
RDRP_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain
RDRP_AQRVAAquareovirus A (isolate Chum salmon/Japan/CSRV/1981) (AQRV-A)

Non-structural protein 1 (NS1)

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VNS1_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
VNS1_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain

Non-structural protein 1 (NS1) (NS73)

Non-structural protein 2 (NS2)

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VNS2_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
VNS2_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain

Non-structural protein 3 (NS3)

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VNS3_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
VNS3_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain

Non-structural 3 (NS3) (NS26)

Non-structural protein 4 (NS4)

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VNS4_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
VNS4_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain

Non-structural protein 4 (NS4) (NS31)

Non-structural protein 5 (NS5)

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VNS5_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
VNS5_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain

Non-structural protein 5 (NS5) (NS16)

Outer capsid protein VP1

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VP1_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
VP1_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain
VP1_AQRVAAquareovirus A (isolate Chum salmon/Japan/CSRV/1981) (AQRV-A)

Outer capsid protein VP4

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VP4_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
VP4_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain

Microtubule-associated protein VP5

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VP5_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
VP5_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain

Clamp protein VP6

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VP6_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
VP6_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain

Outer capsid protein VP7

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VP7_AQRVCAquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain
VP7_AQRVGAquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain