Seadornavirus

Molecular biology

VIRION

Non enveloped, icosahedral, non-turreted virion with a triple capsid structure, about 60-70 nm in diameter. The intermediate capsid has an icosahedral T=13 symmetry, the inner capsid an icosahedral symmetry T=2.

GENOME

Segmented dsRNA linear genome. Contains 12 segments encoding 12 proteins. Segments size range from 862 to 3747 bp, genome total size is about 21 kb (BAV).

GENE EXPRESSION

The dsRNA genome is never completely uncoated, to prevent activation of antiviral state by the cell in response of dsRNA. The viral polymerase synthesizes a capped mRNA from each dsRNA segment. This capped mRNA is translocated to the cell cytoplasm where it is translated.

REPLICATION

CYTOPLASMIC

  1. Virus penetrates into the cytoplasm.
  2. Transcription of the dsRNA genome by viral polymerase occurs inside the virion, so that dsRNA is never exposed to the cytoplasm. This plus-strand transcript is used as template for translation.
  3. (+)RNAs are encapsidated in virion particle, inside which they are transcribed to give RNA (-) molecules with which they become base-paired to produce dsRNA genomes.
  4. Mature virions are released presumably following cell death and associated breakdown of host plasma membrane.

Matching UniProtKB/Swiss-Prot entries

12 entries grouped by protein

Non-structural protein 1 (NS1)


NS1_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

Non-structural protein 2 (NS2) (VP6)


NS2_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

Non-structural protein 3 (NS3)


NS3_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

Non-structural protein 4 (NS4) (VP11)


NS4_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

Non-structural protein 5 (NS5)


NS5_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

RNA-directed RNA polymerase VP1 (EC 2.7.7.48)


RDRP_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

Structural protein VP10


VP10_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

Major inner capsid protein VP2


VP2_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

Outer capsid protein VP3


VP3_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

Outer capsid protein VP4


VP4_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

Outer capsid protein VP8


VP8_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain

Outer capsid protein VP9 (VP9)


VP9_BAVJKBanna virus (strain Indonesia/JKT-6423/1980) (BAV) reference strain