Betaretrovirus

Molecular biology

VIRION

Enveloped, spherical to pleomorphic in shape, 80-100 nm in diameter.

GENOME

Monopartite, linear, dimeric, ssRNA(+) genome of about 8-10 kb, with a 5’-cap and a 3’poly-A tail. There are two long terminal repeats (LTRs) of about 600nt long at the 5’ and 3’ ends. The LTRs contain the U3, R, and U5 regions. There are also a primer binding site (PBS) at the 5’end and a polypurine tract (PPT) at the 3’end.

GENE EXPRESSION

The integrated provirus utilizes the promoter elements in the 5’LTR to drive transcription. This gives rise to the unspliced full length mRNA that will serve as genomic RNA to be packaged into virions or used as a template for translation of gag, gag-pro (1 ribosomal frameshift), and gag-pro-pol (2 ribosomal frameshifts) polyproteins. The spliced mRNAs encode env that is cleaved into SU and TM envelope proteins and sag, a superantigen encoded at the 3’end of the MMTV genome.

REPLICATION

NUCLEAR

  1. Virus attaches to host receptors through the SU glycoprotein. TM glycoprotein mediates fusion with cell membrane.
  2. Internalization and partial uncoating.
  3. ssRNA(+) genome is copied into a linear dsDNA molecule by the reverse transcriptase.
  4. Nuclear entry of the viral dsDNA when the nuclear membrane is disassembled at mitosis.
  5. Viral dsDNA is covalently and randomly integrated into the cell’s genome by the viral integrase (=provirus).
  6. Transcription of provirus by Pol II produces viral spliced and unspliced RNAs.
  7. Nuclear export of the incompletely spliced RNAs.
  8. Translation of unspliced viral RNAs produces Env, Gag and Gag-Pol polyproteins.
  9. Assembly of the virion as intracytoplasmic particles.
  10. Intracytoplasmic particles relocate to the plasma membrane, become enveloped, and are released.
  11. Proteolytic processing of the precursors polyproteins by viral protease and maturation of the virions.

Matching UniProtKB/Swiss-Prot entries

36 entries grouped by protein

All proteins are shown (view only 26 complete proteome entries)

Envelope glycoprotein (Env polyprotein)

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ENV_MMTVCMouse mammary tumor virus (strain C3H) (MMTV) reference strain

Envelope glycoprotein gp70 (Env polyprotein)

ENV_MPMVMason-Pfizer monkey virus (MPMV) (Simian Mason-Pfizer virus)
ENV_MMTVBMouse mammary tumor virus (strain BR6) (MMTV)

Envelope glycoprotein gp70 (Env polyprotein)

ENV_MMTVGMouse mammary tumor virus (strain GR) (MMTV)

Envelope glycoprotein gp70 (Env polyprotein)

ENV_JSRVSheep pulmonary adenomatosis virus (Jaagsiekte sheep retrovirus) (JSRV)
ENV_SRV1Simian retrovirus SRV-1
ENV_SRV2Simian retrovirus SRV-2
ENV_SRV2RSimian retrovirus SRV-2 (isolate 2R-18B1)
ENV_SMRVHSquirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Gag polyprotein

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GAG_MMTVCMouse mammary tumor virus (strain C3H) (MMTV) reference strain
GAG_MPMVMason-Pfizer monkey virus (MPMV) (Simian Mason-Pfizer virus)

Gag polyprotein (Core polyprotein)

GAG_MMTVBMouse mammary tumor virus (strain BR6) (MMTV)
GAG_JSRVSheep pulmonary adenomatosis virus (Jaagsiekte sheep retrovirus) (JSRV)
GAG_SRV1Simian retrovirus SRV-1

Gag polyprotein (Core polyprotein)

GAG_SRV2Simian retrovirus SRV-2

Gag polyprotein (Core polyprotein)

GAG_SMRVHSquirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Pol polyprotein

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POL_MMTVCMouse mammary tumor virus (strain C3H) (MMTV) reference strain

Gag-Pro-Pol polyprotein

POL_MPMVMason-Pfizer monkey virus (MPMV) (Simian Mason-Pfizer virus)
POL_MMTVBMouse mammary tumor virus (strain BR6) (MMTV)
POL_JSRVSheep pulmonary adenomatosis virus (Jaagsiekte sheep retrovirus) (JSRV)
POL_SRV1Simian retrovirus SRV-1
POL_SRV2Simian retrovirus SRV-2
POL_SMRVHSquirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Protein PR73

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PR73_MMTVCMouse mammary tumor virus (strain C3H) (MMTV) reference strain

Protein PR73 (Superantigen) (Sag)

PR73_MMTVBMouse mammary tumor virus (strain BR6) (MMTV)
PR73_MMTVGMouse mammary tumor virus (strain GR) (MMTV)

Protein PR73 5'-endogenous


PR7L_MMTVGMouse mammary tumor virus (strain GR) (MMTV)

Protein PR73 3'-endogenous


PR7R_MMTVGMouse mammary tumor virus (strain GR) (MMTV)

Gag-Pro polyprotein


PRO_MMTVCMouse mammary tumor virus (strain C3H) (MMTV) reference strain

Protease (EC 3.4.23.-)

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VPRT_MPMVMason-Pfizer monkey virus (MPMV) (Simian Mason-Pfizer virus)
VPRT_MMTVBMouse mammary tumor virus (strain BR6) (MMTV)
VPRT_JSRVSheep pulmonary adenomatosis virus (Jaagsiekte sheep retrovirus) (JSRV)

Bifunctional protease/dUTPase

VPRT_SRV1Simian retrovirus SRV-1
VPRT_SRV2Simian retrovirus SRV-2
VPRT_SMRVHSquirrel monkey retrovirus (SMRV-H) (SMRV-HLB)

Protein Vpu (ORF-X protein)


VPU_JSRVSheep pulmonary adenomatosis virus (Jaagsiekte sheep retrovirus) (JSRV)