Viral penetration into host nucleus

Most DNA and few RNA viruses target their genome to the host nucleus. The crossing of nuclear membrane occurs in several ways:
-RNA virus, dsDNA virus and lentivirus genomes enter via the nuclear pore complex through the cellular Importin transport.
-ssDNA virus capsid seems to be small enough to cross the NPC and enter the nucleus as an intact capsid.
-Hepadnaviridae capsid would enter the NPC pore, but stay attached to it and release the viral genomic DNA into the nucleoplasm.
-Herpesvirales capsid is too big to enter the NPC pore, they inject the viral genome directly through the NPC on which the capsid docks.
-All retroviridae except lentivirus would enter the nucleus during mitosis, when the nuclear membrane temporarily disintegrates.

All these strategies to cross the nuclear envelope barrier are associated with various levels of capsid disassembly, since virus can pass intact (e.g. parvoviridae) or, in the case of injection, only the viral genome enters the nucleus (e.g. herpesviruses). genome integration in the host genome may eventually follow.

Matching UniProtKB/Swiss-Prot entries

572 entries grouped by protein

All proteins are shown (view only 370 complete proteome entries)

Capsid protein (Core antigen) (Core protein) (HBcAg) (p21.5)

Select_all Deselect_all  
CAPSD_BGYMJBean golden yellow mosaic virus (isolate Puerto Rico-Japan) (BGYMV) reference strain

Capsid protein (Coat protein) (CP)

CAPSD_BCTVCBeet curly top virus (strain California/Logan) (BCTV) reference strain

Capsid protein (Coat protein) (CP)

CAPSD_PAVBPBovine parvovirus (isolate pAT153/1986) (BPV) reference strain

Capsid protein VP1 (Coat protein VP1)

CAPSD_CAMVSCauliflower mosaic virus (strain Strasbourg) (CaMV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_CAVC1Chicken anemia virus (isolate Germany Cuxhaven-1) (CAV) reference strain

Capsid protein (CA1) (Coat protein)

CAPSD_DHBVQDuck hepatitis B virus (isolate Shanghai/DHBVQCA34) (DHBV) reference strain

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HBVCJHepatitis B virus genotype C subtype ayr (isolate Human/Japan/Okamoto/-) (HBV-C) reference strain
CAPSD_MSVSMaize streak virus genotype A (isolate South Africa) (MSV) reference strain

Capsid protein (Coat protein) (CP)

CAPSD_MUMIPMurine minute virus (strain MVM prototype) (MVM) (Murine minute virus (strain ... reference strain

Capsid protein VP1 (Coat protein VP1)

CAPSD_PCV1CPorcine circovirus 1 (isolate China) (PCV1) reference strain

Capsid protein

CAPSD_SOCMVSoybean chlorotic mottle virus reference strain

Capsid protein (CP) (Coat protein)

CAPSD_TPCTVTomato pseudo-curly top virus (TPCTV) reference strain

Capsid protein (Coat protein) (CP)

CAPSD_ABMVWAbutilon mosaic virus (isolate West India) (AbMV)

Capsid protein (Coat protein) (CP)

CAPSD_CLVNAfrican cassava mosaic virus (isolate Nigerian) (ACMV) (Cassava latent virus ...

Capsid protein (Coat protein) (CP)

CAPSD_CLVKAfrican cassava mosaic virus (isolate West Kenyan 844) (ACMV) (Cassava latent ...

Capsid protein (Coat protein) (CP)

CAPSD_ASHVArtic squirrel hepatitis virus (ASHV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_BFDVBeak and feather disease virus (BFDV)

Capsid protein

CAPSD_BGYMVBean golden yellow mosaic virus (isolate Puerto Rico) (BGYMV) (Bean golden ...

Capsid protein (Coat protein) (CP)

CAPSD_BEYDVBean yellow dwarf virus (BeYDV)

Capsid protein (Coat protein) (CP)

CAPSD_CALCVCabbage leaf curl virus (isolate Jamaica) (CaLCuV)

Capsid protein (Coat protein) (CP)

CAPSD_CACVCanary circovirus (CaCV)

Probable capsid protein

CAPSD_PAVCCanine parvovirus type 2 (CPV-2)

Capsid protein VP2 (Coat protein VP2)

CAPSD_PAVCNCanine parvovirus type 2 (isolate Dog/United States/CPV-N/1978) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVCBCanine parvovirus type 2 (isolate Dog/United States/CPV-b/1978) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVC7Canine parvovirus type 2 (strain Dog/United States/780929/-) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVCDCanine parvovirustype 2 (isolate Dog/United States/CPV-d/1988) (CPV-2)

Capsid protein VP1 (Coat protein VP1)

CAPSD_CERVCarnation etched ring virus (CERV)

Probable capsid protein (CP) (Coat protein)

CAPSD_CAMVECauliflower mosaic virus (strain BBC) (CaMV)

Capsid protein (CP) (Coat protein)

CAPSD_CAMVCCauliflower mosaic virus (strain CM-1841) (CaMV)

Capsid protein (CP) (Coat protein)

CAPSD_CAMVDCauliflower mosaic virus (strain D/H) (CaMV)

Capsid protein (CP) (Coat protein)

CAPSD_CAMVNCauliflower mosaic virus (strain NY8153) (CaMV)

Capsid protein (CP) (Coat protein)

CAPSD_CYLCVCestrum yellow leaf curling virus (CmYLCV)

Capsid protein (CP) (coat protein)

CAPSD_CAVAUChicken anemia virus (isolate Australia) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAVCAChicken anemia virus (isolate Australia/CAU269-7/2000) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAV82Chicken anemia virus (isolate Japan 82-2) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAV26Chicken anemia virus (isolate USA 26p4) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_CAVCIChicken anemia virus (isolate USA CIA-1) (CAV)

Capsid protein (CA1) (Coat protein)

CAPSD_HBVCPChimpanzee hepatitis B virus (isolate United Kingdom/LSH/1988) (HBVcpz)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_CSMVChloris striate mosaic virus (CSMV)

Capsid protein (Coat protein) (CP)

CAPSD_HPBDBDuck hepatitis B virus (isolate brown Shanghai duck S5) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HPBDWDuck hepatitis B virus (isolate white Shanghai duck S31) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HPBDCDuck hepatitis B virus (strain China) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_DHBV3Duck hepatitis B virus (strain Germany/DHBV-3) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_DHBV1Duck hepatitis B virus (strain United States/DHBV-16) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_FPVFeline panleukopenia virus (FPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_FPV19Feline panleukopenia virus (strain 193) (FPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_FMVDFigwort mosaic virus (strain DxS) (FMV)

Probable capsid protein (CP) (Coat protein)

CAPSD_HBVGBGibbon hepatitis B virus subtype ayw3q (isolate Hope) (HBVgbn)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_GOCVGoose circovirus (GoCV)

Probable capsid protein

CAPSD_HBVGOGorilla hepatitis B virus (isolate Cameroon/gor97) (HBVgor)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_GSHVGround squirrel hepatitis virus (strain 27) (GSHV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_PAVHHHamster parvovirus H1

Capsid protein VP1 (Coat protein VP1)

CAPSD_HBVA5Hepatitis B virus genotype A1 subtype adw (isolate Philippines/pFDW294/1988) ...
CAPSD_HBVA6Hepatitis B virus genotype A1 subtype adw2 (isolate South Africa/84/2001) ...
CAPSD_HBVA7Hepatitis B virus genotype A2 (isolate Japan/11D11HCCW/1998) (HBV-A)
CAPSD_HBVA2Hepatitis B virus genotype A2 subtype adw (isolate Japan/Nishioka/1983) (HBV-A)
CAPSD_HBVA4Hepatitis B virus genotype A2 subtype adw2 (isolate Germany/991/1990) (HBV-A)
CAPSD_HBVA3Hepatitis B virus genotype A2 subtype adw2 (strain Rutter 1979) (HBV-A)
CAPSD_HBVA9Hepatitis B virus genotype A3 (isolate Cameroon/CMR711/1994) (HBV-A)
CAPSD_HBVA8Hepatitis B virus genotype A3 (isolate Cameroon/CMR983/1994) (HBV-A)
CAPSD_HBVB4Hepatitis B virus genotype B/C subtype adw (isolate Okinawa/pODW282/1998) ...
CAPSD_HBVB8Hepatitis B virus genotype B1 (isolate Japan/Ry30/2002) (HBV-B)
CAPSD_HBVB7Hepatitis B virus genotype B1 (isolate Japan/Yamagata-2/1998) (HBV-B)
CAPSD_HBVB1Hepatitis B virus genotype B1 subtype adw (isolate Japan/pJDW233/1988) (HBV-B)
CAPSD_HBVB2Hepatitis B virus genotype B2 (isolate Indonesia/pIDW420/1988) (HBV-B)
CAPSD_HBVB3Hepatitis B virus genotype B2 (isolate Vietnam/9873/1997) (HBV-B)
CAPSD_HBVB6Hepatitis B virus genotype B2 subtype adw (isolate China/patient4/1996) (HBV-B)
CAPSD_HBVC0Hepatitis B virus genotype C (isolate Vietnam/3270/2000) (HBV-C)
CAPSD_HBVC5Hepatitis B virus genotype C subtype ad (isolate Japan/S-179/1988) (HBV-C)
CAPSD_HBVC8Hepatitis B virus genotype C subtype adr (isolate Japan/A4/1994) (HBV-C)
CAPSD_HBVC1Hepatitis B virus genotype C subtype adr (isolate Japan/Nishioka/1983) (HBV-C)
CAPSD_HBVC4Hepatitis B virus genotype C subtype adr (isolate Korea/Kim/1989) (HBV-C)
CAPSD_HBVC3Hepatitis B virus genotype C subtype adr (strain Japan/adr4/1983) (HBV-C)
CAPSD_HBVC2Hepatitis B virus genotype C subtype ar (isolate Japan/S-207/1988) (HBV-C)
CAPSD_HBVC9Hepatitis B virus genotype C subtype ayw (isolate Australia/AustRC/1992) (HBV-C)
CAPSD_HBVC7Hepatitis B virus genotype C subtype ayw (isolate China/Tibet127/2002) (HBV-C)
CAPSD_HBVD2Hepatitis B virus genotype D (isolate France/alpha1/1989) (HBV-D)
CAPSD_HBVD7Hepatitis B virus genotype D (isolate Germany/1-91/1991) (HBV-D)
CAPSD_HBVD1Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979) ...
CAPSD_HBVD5Hepatitis B virus genotype D subtype ayw (isolate Australia/AustKW/1991) (HBV-D)
CAPSD_HBVD3Hepatitis B virus genotype D subtype ayw (isolate France/Tiollais/1979) (HBV-D)
CAPSD_HBVD6Hepatitis B virus genotype D subtype ayw (isolate Italy/CI/1992) (HBV-D)
CAPSD_HBVD4Hepatitis B virus genotype D subtype ayw (isolate Japan/JYW796/1988) (HBV-D)
CAPSD_HBVF1Hepatitis B virus genotype F2 (isolate Brazil/w4B) (HBV-F)
CAPSD_HBVF6Hepatitis B virus genotype F2 subtype adw4q (isolate Senegal/9203) (HBV-F)
CAPSD_HBVG3Hepatitis B virus genotype G (isolate IG29227/2000) (HBV-G)
CAPSD_HBVG2Hepatitis B virus genotype G (isolate United States/USG17/2002) (HBV-G)
CAPSD_HBVG1Hepatitis B virus genotype G subtype adw2 (isolate United States/sf/1990) ...
CAPSD_HBVH3Hepatitis B virus genotype H subtype adw4 (isolate Nicaragua/2928Nic/1997) ...
CAPSD_HHBVHeron hepatitis B virus (HHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_PAVHUHuman parvovirus B19 (isolate AU) (HPV B19)

Capsid protein VP1 (Coat protein VP1)

CAPSD_ICMVIndian cassava mosaic virus (ICMV)

Capsid protein (Coat protein) (CP)

CAPSD_MSVKMaize streak virus genotype A (isolate Kenya) (MSV)

Capsid protein (Coat protein) (CP)

CAPSD_MSVNMaize streak virus genotype A (isolate Nigeria) (MSV)

Capsid protein (Coat protein) (CP)

CAPSD_MSVTAMaize streak virus genotype B (isolate Tas) (MSV)

Capsid protein (Coat protein) (CP)

CAPSD_MSVSEMaize streak virus genotype C (isolate Set) (MSV)

Capsid protein (Coat protein) (CP)

CAPSD_MSVRAMaize streak virus genotype D (isolate Raw) (MSV)

Capsid protein (Coat protein) (CP)

CAPSD_MSVPAMaize streak virus genotype E (isolate Pat) (MSV)

Capsid protein (Coat protein) (CP)

CAPSD_MISV9Miscanthus streak virus (isolate 91) (MiSV)

Capsid protein (Coat protein) (CP)

CAPSD_MYMVVMungbean yellow mosaic virus (strain Vigna) (MYMV)

Capsid protein (Coat protein) (CP)

CAPSD_MUMIMMurine minute virus (strain MVMi) (MVM) (Murine parvovirus)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PASVKPanicum streak virus (isolate Kenya) (PanSV)

Capsid protein (Coat protein) (CP)

CAPSD_PAVL3Parvovirus LuIII

Capsid protein VP1 (Coat protein VP1)

CAPSD_PHUVPepper huasteco yellow vein virus (PHYVV) (Pepper huasteco virus)

Capsid protein (Coat protein) (CP)

CAPSD_PICVPigeon circovirus (PiCV) (Columbid circovirus)

Probable capsid protein

CAPSD_PCV2Porcine circovirus 2 (PCV2)

Capsid protein

CAPSD_PAVP9Porcine parvovirus (strain 90HS) (PPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVPKPorcine parvovirus (strain Kresse) (PPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PAVPNPorcine parvovirus (strain NADL-2) (PPV)

Capsid protein VP1 (Coat protein VP1)

CAPSD_PYMVVPotato yellow mosaic virus (isolate Venezuela) (PYMV)

Capsid protein (Coat protein) (CP)

CAPSD_SLCVSquash leaf curl virus (SLCV)

Capsid protein (Coat protein) (CP)

CAPSD_SSVNSugarcane streak virus (isolate South Africa) (SSV) (Sugarcane streak virus ...

Capsid protein (Coat protein) (CP)

CAPSD_TYDVATobacco yellow dwarf virus (strain Australia) (TYDV)

Capsid protein (Coat protein) (CP)

CAPSD_TGMVYTomato golden mosaic virus (strain Yellow vein) (TGMV)

Capsid protein (Coat protein) (CP)

CAPSD_TLCVATomato leaf curl virus (strain Australia) (ToLCV)

Capsid protein (Coat protein) (CP)

CAPSD_TMOVTomato mottle virus (isolate Florida) (ToMoV)

Capsid protein (Coat protein) (CP)

CAPSD_TYLCCTomato yellow leaf curl China virus (TYLCCNV)

Capsid protein (Coat protein) (CP)

CAPSD_TYCSVTomato yellow leaf curl Sardinia virus (TYLCSV)

Capsid protein (Coat protein) (CP)

CAPSD_TYCS1Tomato yellow leaf curl Sardinia virus (isolate Spain-1) (TYLCSV)

Capsid protein (Coat protein) (CP)

CAPSD_TYCS2Tomato yellow leaf curl Sardinia virus (isolate Spain-2) (TYLCSV)

Capsid protein (Coat protein) (CP)

CAPSD_TYLCITomato yellow leaf curl virus (strain Israel) (TYLCV)

Capsid protein (Coat protein) (CP)

CAPSD_WDVSWheat dwarf virus (isolate Sweden) (WDV)

Capsid protein (Coat protein) (CP)

CAPSD_WHV1Woodchuck hepatitis B virus (isolate 1) (WHV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_WHV2Woodchuck hepatitis B virus (isolate 2) (WHV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_WHV3Woodchuck hepatitis B virus (isolate 59) (WHV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_WHV4Woodchuck hepatitis B virus (isolate 7) (WHV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_WHV5Woodchuck hepatitis B virus (isolate 8) (WHV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_WMHBVWoolly monkey hepatitis B virus (isolate Louisville) (WMHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

Large delta antigen (L-HDAg) (p27)

Select_all Deselect_all  
LHDAG_HDVD3Hepatitis delta virus genotype I (isolate D380) (HDV) reference strain
LHDAG_HDVAMHepatitis delta virus genotype I (isolate American) (HDV)
LHDAG_HDVITHepatitis delta virus genotype I (isolate Italian) (HDV)
LHDAG_HDVM1Hepatitis delta virus genotype I (isolate Japanese M-1) (HDV)
LHDAG_HDVM2Hepatitis delta virus genotype I (isolate Japanese M-2) (HDV)
LHDAG_HDVS2Hepatitis delta virus genotype I (isolate Japanese S-2) (HDV)
LHDAG_HDVL1Hepatitis delta virus genotype I (isolate Lebanon-1) (HDV)
LHDAG_HDVNAHepatitis delta virus genotype I (isolate Nauru) (HDV)
LHDAG_HDVU2Hepatitis delta virus genotype I (isolate US-2) (HDV)
LHDAG_HDVWOHepatitis delta virus genotype I (isolate Woodchuck) (HDV)
LHDAG_HDV83Hepatitis delta virus genotype II (isolate 7/18/83) (HDV)
LHDAG_HDVS1Hepatitis delta virus genotype II (isolate Japanese S-1) (HDV)
LHDAG_HDVTWHepatitis delta virus genotype II (isolate TW2476) (HDV)
LHDAG_HDVP1Hepatitis delta virus genotype III (isolate Peru-1) (HDV)
LHDAG_HDVV2Hepatitis delta virus genotype III (isolate VnzD8349) (HDV)
LHDAG_HDVV3Hepatitis delta virus genotype III (isolate VnzD8375) (HDV)
LHDAG_HDVV1Hepatitis delta virus genotype III (isolate VnzD8624) (HDV)

Nucleoprotein (Nucleocapsid protein) (Protein N)

Select_all Deselect_all  
NCAP_BDVVBorna disease virus (strain V) (BDV) reference strain

Nucleoprotein (N protein) (Nucleocapsid protein) (p38) (p40)

NCAP_ISAV8Infectious salmon anemia virus (isolate Atlantic salmon/Norway/810/9/99) (ISAV) reference strain
NCAP_I96A0Influenza A virus (strain A/Goose/Guangdong/1/1996 H5N1 genotype Gs/Gd) reference strain
NCAP_I34A1Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) reference strain
NCAP_INBLEInfluenza B virus (strain B/Lee/1940) reference strain
NCAP_INCAAInfluenza C virus (strain C/Ann Arbor/1/1950) reference strain
NCAP_THOGVThogoto virus (isolate SiAr 126) (Tho) reference strain
NCAP_DHVI1Dhori virus (strain Indian/1313/61) (Dho)
NCAP_I76A0Influenza A virus (strain A/Anas acuta/Primorje/695/1976 H2N3)
NCAP_I60A0Influenza A virus (strain A/Ann Arbor/6/1960 H2N2)
NCAP_I89A0Influenza A virus (strain A/Beijing/337/1989 H3N2)
NCAP_I89A1Influenza A virus (strain A/Beijing/352/1989 H3N2)
NCAP_I89A2Influenza A virus (strain A/Beijing/353/1989 H3N2)
NCAP_I75A0Influenza A virus (strain A/Beijing/39/1975 H3N2)
NCAP_I77AAInfluenza A virus (strain A/Brazil/11/1978 H1N1)
NCAP_I18A0Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) (Influenza A virus ...
NCAP_I77AGInfluenza A virus (strain A/Budgerigar/Hokkaido/1/1977 H4N6)
NCAP_I78A6Influenza A virus (strain A/California/10/1978 H1N1)
NCAP_I49A0Influenza A virus (strain A/Chicken/Germany/n/1949 H10N7)
NCAP_I02A2Influenza A virus (strain A/Chicken/Hong Kong/31.2/2002 H5N1 genotype X1)
NCAP_I02A3Influenza A virus (strain A/Chicken/Hong Kong/37.4/2002 H5N1 genotype X2)
NCAP_I01A3Influenza A virus (strain A/Chicken/Hong Kong/715.5/2001 H5N1 genotype E)

Nucleoprotein

NCAP_I02A5Influenza A virus (strain A/Chicken/Hong Kong/96.1/2002 H5N1 genotype Y)

Nucleoprotein

NCAP_I01A2Influenza A virus (strain A/Chicken/Hong Kong/FY150/2001 H5N1 genotype D)
NCAP_I02A6Influenza A virus (strain A/Chicken/Hong Kong/YU22/2002 H5N1 genotype Z)

Nucleoprotein

NCAP_I01A1Influenza A virus (strain A/Chicken/Hong Kong/YU562/2001 H5N1 genotype B)
NCAP_I83A5Influenza A virus (strain A/Chicken/Pennsylvania/1/1983 H5N2)
NCAP_I59A0Influenza A virus (strain A/Chicken/Scotland/1959 H5N1)
NCAP_I03A1Influenza A virus (strain A/Chicken/Shantou/4231/2003 H5N1 genotype V)

Nucleoprotein

NCAP_I83A1Influenza A virus (strain A/Chile/1/1983 H1N1)
NCAP_I96A3Influenza A virus (strain A/China:Nanchang/11/1996 H1N1)
NCAP_I80A1Influenza A virus (strain A/Duck/Australia/749/1980 H1N1)
NCAP_I77A3Influenza A virus (strain A/Duck/Bavaria/2/1977 H1N1)
NCAP_I78A5Influenza A virus (strain A/Duck/Beijing/1/1978 H3N6)
NCAP_I56A1Influenza A virus (strain A/Duck/Czechoslovakia/1956 H4N6)
NCAP_I56A2Influenza A virus (strain A/Duck/England/1/1956 H11N6)
NCAP_I62A0Influenza A virus (strain A/Duck/England/1/1962 H4N6)
NCAP_I49A1Influenza A virus (strain A/Duck/Germany/1949 H10N7)
NCAP_I80A6Influenza A virus (strain A/Duck/Hokkaido/8/1980 H3N8)
NCAP_I00A0Influenza A virus (strain A/Duck/Hong Kong/2986.1/2000 H5N1 genotype C)
NCAP_I75A2Influenza A virus (strain A/Duck/Hong Kong/7/1975 H3N2)
NCAP_I53A0Influenza A virus (strain A/Duck/Manitoba/1/1953 H10N7)
NCAP_I74A2Influenza A virus (strain A/Duck/Memphis/928/1974 H3N8)
NCAP_I76AKInfluenza A virus (strain A/Duck/New Zealand/31/1976 H4N6)
NCAP_I69A1Influenza A virus (strain A/Duck/Pennsylvania/1/1969 H6N1)
NCAP_I60A2Influenza A virus (strain A/Duck/Ukraine/2/1960 H11N8)
NCAP_I55A0Influenza A virus (strain A/England/19/1955 H1N1)
NCAP_I89A7Influenza A virus (strain A/Equine/Jillin/1/1989 H3N8)
NCAP_I86A2Influenza A virus (strain A/Equine/Kentucky/2/1986 H3N8)
NCAP_I73A4Influenza A virus (strain A/Equine/London/1416/1973 H7N7)
NCAP_I63A2Influenza A virus (strain A/Equine/Miami/1/1963 H3N8)
NCAP_I56A3Influenza A virus (strain A/Equine/Prague/1/1956 H7N7)
NCAP_I85A5Influenza A virus (strain A/Equine/Santiago/1/1985 H3N8)
NCAP_I86A3Influenza A virus (strain A/Equine/Tennessee/5/1986 H3N8)
NCAP_I47A0Influenza A virus (strain A/Fort Monmouth/1/1947 H1N1)
NCAP_I50A0Influenza A virus (strain A/Fort Warren/1/1950 H1N1)
NCAP_I27A0Influenza A virus (strain A/Fowl plague virus/Dobson/'Dutch'/1927 H7N7)
NCAP_I34A0Influenza A virus (strain A/Fowl plague virus/Rostock/8/1934 H7N1)
NCAP_I79A7Influenza A virus (strain A/Grey teal/Australia/2/1979 H4N4)
NCAP_I77A5Influenza A virus (strain A/Guangdong/38/1977 H3N2)
NCAP_I89A3Influenza A virus (strain A/Guangdong/39/1989 H3N2)
NCAP_I87A2Influenza A virus (strain A/Guangdong/9/1987 H3N2)
NCAP_I02A1Influenza A virus (strain A/Guinea fowl/Hong Kong/38/2002 H5N1 genotype X0)
NCAP_I84A4Influenza A virus (strain A/Gull/Astrakhan/227/1984 H13N6)
NCAP_I79A8Influenza A virus (strain A/Gull/Maryland/1815/1979 H13N6)
NCAP_I78AFInfluenza A virus (strain A/Gull/Maryland/1824/1978 H13N6)
NCAP_I77AEInfluenza A virus (strain A/Gull/Maryland/5/1977 H11N9)
NCAP_I77AFInfluenza A virus (strain A/Gull/Maryland/704/1977 H13N6)
NCAP_I80ACInfluenza A virus (strain A/Gull/Massachusetts/26/1980 H13N6)
NCAP_I80ADInfluenza A virus (strain A/Gull/Minnesota/945/1980 H13N6)
NCAP_I36A0Influenza A virus (strain A/Henry/1936 H1N1)
NCAP_I40A0Influenza A virus (strain A/Hickox/1940 H1N1)
NCAP_I68A4Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
NCAP_I97A1Influenza A virus (strain A/Hong Kong/156/1997 H5N1 genotype Gs/Gd)
NCAP_I03A0Influenza A virus (strain A/Hong Kong/212/2003 H5N1 genotype Z+)
NCAP_I83A8Influenza A virus (strain A/Hong Kong/5/1983 H3N2)
NCAP_I80AAInfluenza A virus (strain A/India/6263/1980 H1N1)
NCAP_I79A4Influenza A virus (strain A/Kiev/59/1979 H1N1)
NCAP_I93A0Influenza A virus (strain A/Kitakyushu/159/1993 H3N2)
NCAP_I54A0Influenza A virus (strain A/Leningrad/1/1954 H1N1)
NCAP_I54A2Influenza A virus (strain A/Malaysia:Malaya/302/1954 H1N1)
NCAP_I82A0Influenza A virus (strain A/Mallard/Astrakhan/244/1982 H14N6) (Influenza A ...
NCAP_I82A1Influenza A virus (strain A/Mallard/Astrakhan/263/1982 H14N5) (Influenza A ...
NCAP_I78A3Influenza A virus (strain A/Mallard/New York/6750/1978 H2N2)
NCAP_I71A1Influenza A virus (strain A/Memphis/1/1971 H3N2)
NCAP_I73A3Influenza A virus (strain A/Memphis/1/1973 H3N2)
NCAP_I72A4Influenza A virus (strain A/Memphis/101/1972 H3N2)
NCAP_I76A6Influenza A virus (strain A/Memphis/110/1976 H3N2)
NCAP_I85A0Influenza A virus (strain A/Memphis/14/1985 H3N2)
NCAP_I78A8Influenza A virus (strain A/Memphis/18/1978 H3N2)
NCAP_I78A7Influenza A virus (strain A/Memphis/2/1978 H3N2)
NCAP_I88A2Influenza A virus (strain A/Memphis/3/1988 H3N2)
NCAP_I73A2Influenza A virus (strain A/Memphis/4/1973 H3N2)
NCAP_I80A4Influenza A virus (strain A/Memphis/4/1980 H3N2)
NCAP_I80A3Influenza A virus (strain A/Memphis/5/1980 H3N2)
NCAP_I86A1Influenza A virus (strain A/Memphis/6/1986 H3N2)
NCAP_I88A3Influenza A virus (strain A/Memphis/8/1988 H3N2)
NCAP_I84A3Influenza A virus (strain A/Mink/Sweden/1984 H10N4)
NCAP_I76A7Influenza A virus (strain A/New Jersey/8/1976 H1N1)
NCAP_I00A1Influenza A virus (strain A/New Zealand:South Canterbury/35/2000 H1N1)
NCAP_I68A6Influenza A virus (strain A/Northern Territory/60/1968 H3N2) (Influenza A virus ...
NCAP_I83A2Influenza A virus (strain A/Ohio/4/1983 H1N1)
NCAP_I73A0Influenza A virus (strain A/Parrot/Ulster/1973 H7N1)
NCAP_I73A5Influenza A virus (strain A/Port Chalmers/1/1973 H3N2)
NCAP_I85A7Influenza A virus (strain A/Ruddy Turnstone/New Jersey/47/1985 H4N6)
NCAP_I06A0Influenza A virus (strain A/Russia:St.Petersburg/8/2006 H1N1)
NCAP_I80A2Influenza A virus (strain A/Seal/Massachusetts/1/1980 H7N7)
NCAP_I87A0Influenza A virus (strain A/Shanghai/11/1987 H3N2)
NCAP_I89A4Influenza A virus (strain A/Shanghai/16/1989 H3N2)
NCAP_I80A0Influenza A virus (strain A/Shanghai/31/1980 H3N2)
NCAP_I90A0Influenza A virus (strain A/Shanghai/6/1990 H3N2)
NCAP_I72A5Influenza A virus (strain A/Shearwater/Australia/1972 H6N5)
NCAP_I01A0Influenza A virus (strain A/Silky Chicken/Hong Kong/SF189/2001 H5N1 genotype A)

Nucleoprotein

NCAP_I02A4Influenza A virus (strain A/Silky Chicken/Hong Kong/YU100/2002 H5N1 genotype X3)
NCAP_I57A5Influenza A virus (strain A/Singapore/1/1957 H2N2)
NCAP_I37A0Influenza A virus (strain A/Swine/29/1937 H1N1)
NCAP_I49A2Influenza A virus (strain A/Swine/41/1949 H1N1)
NCAP_I35A1Influenza A virus (strain A/Swine/Cambridge/1/1935 H1N1)
NCAP_I77A4Influenza A virus (strain A/Swine/Colorado/1/1977 H3N2)
NCAP_I83A0Influenza A virus (strain A/Swine/Dandong/9/1983 H3N2)
NCAP_I81A0Influenza A virus (strain A/Swine/Germany/2/1981 H1N1)
NCAP_I82A4Influenza A virus (strain A/Swine/Hong Kong/126/1982 H3N2)
NCAP_I82A7Influenza A virus (strain A/Swine/Hong Kong/127/1982 H3N2)
NCAP_I76AAInfluenza A virus (strain A/Swine/Hong Kong/6/1976 H3N2)
NCAP_I30A0Influenza A virus (strain A/Swine/Iowa/15/1930 H1N1)
NCAP_I88A5Influenza A virus (strain A/Swine/Iowa/17672/1988 H1N1)
NCAP_I46A1Influenza A virus (strain A/Swine/Iowa/1946 H1N1)
NCAP_I76AFInfluenza A virus (strain A/Swine/Iowa/1976/1931 H1N1)
NCAP_I81A1Influenza A virus (strain A/Swine/Italy/141/1981 H1N1)
NCAP_I79A5Influenza A virus (strain A/Swine/Italy/2/1979 H1N1)
NCAP_I76AGInfluenza A virus (strain A/Swine/Italy/437/1976 H1N1)
NCAP_I89A6Influenza A virus (strain A/Swine/Italy/839/1989 H1N1)
NCAP_I42A0Influenza A virus (strain A/Swine/Jamesburg/1942 H1N1)
NCAP_I54A1Influenza A virus (strain A/Swine/May/1954 H1N1)
NCAP_I85A4Influenza A virus (strain A/Swine/Netherlands/12/1985 H1N1)
NCAP_I35A2Influenza A virus (strain A/Swine/Ohio/23/1935 H1N1)
NCAP_I81A4Influenza A virus (strain A/Swine/Ontario/2/1981 H1N1)
NCAP_I77ACInfluenza A virus (strain A/Swine/Tennessee/24/1977 H1N1)
NCAP_I57A7Influenza A virus (strain A/Swine/Wisconsin/1/1957 H1N1)
NCAP_I61A1Influenza A virus (strain A/Swine/Wisconsin/1/1961 H1N1)
NCAP_I67A2Influenza A virus (strain A/Swine/Wisconsin/1/1967 H1N1)
NCAP_I02A7Influenza A virus (strain A/Teal/China/2978.1/2002 H5N1 genotype W)

Nucleoprotein

NCAP_I80A5Influenza A virus (strain A/Teal/Iceland/29/1980 H7N7)
NCAP_I61A0Influenza A virus (strain A/Tern/South Africa/1961 H5N3)
NCAP_I72A6Influenza A virus (strain A/Tern/Turkmenia/18/1972 H3N3)
NCAP_I77AHInfluenza A virus (strain A/Texas/1/1977 H3N2)
NCAP_I83A4Influenza A virus (strain A/Turkey/Ireland/1378/1983 H5N8)
NCAP_I81A3Influenza A virus (strain A/Turkey/Minnesota/1661/1981 H1N1)
NCAP_I80A8Influenza A virus (strain A/Turkey/Minnesota/833/1980 H4N2)
NCAP_I68A3Influenza A virus (strain A/Turkey/Ontario/6118/1968 H8N4)
NCAP_I66A0Influenza A virus (strain A/Turkey/Ontario/7732/1966 H5N9)
NCAP_I66A1Influenza A virus (strain A/Turkey/Wisconsin/1/1966 H9N2)
NCAP_I51A0Influenza A virus (strain A/USA:Albany/12/1951 H1N1)
NCAP_I45A0Influenza A virus (strain A/USA:Huston/AA/1945 H1N1)
NCAP_I43A0Influenza A virus (strain A/USA:Iowa/1943 H1N1)
NCAP_I96A2Influenza A virus (strain A/USA:Memphis/10/1996 H1N1)
NCAP_I35A3Influenza A virus (strain A/USA:Phila/1935 H1N1)
NCAP_I07A0Influenza A virus (strain A/USA:Texas/UR06-0195/2007 H1N1)

Nucleocapsid protein

NCAP_I77ABInfluenza A virus (strain A/USSR/90/1977 H1N1)
NCAP_I72A2Influenza A virus (strain A/Udorn/307/1972 H3N2)
NCAP_I68A2Influenza A virus (strain A/Victoria/5/1968 H2N2)
NCAP_I84A2Influenza A virus (strain A/Whale/Maine/328/1984 H13N2)
NCAP_I76AEInfluenza A virus (strain A/Whale/Pacific ocean/19/1976 H1N3)
NCAP_I33A0Influenza A virus (strain A/Wilson-Smith/1933 H1N1) (Influenza A virus (strain ...
NCAP_I88A7Influenza A virus (strain A/Wisconsin/3523/1988 H1N1)
NCAP_INBACInfluenza B virus (strain B/Ann Arbor/1/1966 [cold-adapted])
NCAP_INBADInfluenza B virus (strain B/Ann Arbor/1/1966 [wild-type])
NCAP_INBAAInfluenza B virus (strain B/Ann Arbor/1/1986)
NCAP_INBP9Influenza B virus (strain B/Panama/45/1990)
NCAP_INBSIInfluenza B virus (strain B/Singapore/222/1979)
NCAP_INCCAInfluenza C virus (strain C/California/1978)
NCAP_INCJHInfluenza C virus (strain C/Johannesburg/1/1966)

Gag-Pol polyprotein (Pr160Gag-Pol)

Select_all Deselect_all  
POL_COYMVCommelina yellow mottle virus (CoYMV) reference strain

Polyprotein P3

POL_HV1H2Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) (HIV-1) reference strain
POL_HV2BEHuman immunodeficiency virus type 2 subtype A (isolate BEN) (HIV-2) reference strain
POL_RTBVPRice tungro bacilliform virus (isolate Philippines) (RTBV) reference strain

Polyprotein P3 (P194 protein)

POL_SFVCPSimian foamy virus (isolate chimpanzee) (SFVcpz) reference strain

Pro-Pol polyprotein (Pr125Pol)

POL_FFVFeline foamy virus (FFV) (Feline syncytial virus)

Pro-Pol polyprotein (Pr125Pol)

POL_HV1MAHuman immunodeficiency virus type 1 group M subtype A (isolate MAL) (HIV-1)
POL_HV1U4Human immunodeficiency virus type 1 group M subtype A (isolate U455) (HIV-1)
POL_HV1A2Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2) (HIV-1)
POL_HV1B1Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)
POL_HV1B5Human immunodeficiency virus type 1 group M subtype B (isolate BH5) (HIV-1)
POL_HV1BRHuman immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI) (HIV-1)
POL_HV1JRHuman immunodeficiency virus type 1 group M subtype B (isolate JRCSF) (HIV-1)
POL_HV1LWHuman immunodeficiency virus type 1 group M subtype B (isolate LW123) (HIV-1)
POL_HV1MNHuman immunodeficiency virus type 1 group M subtype B (isolate MN) (HIV-1)
POL_HV1N5Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1)
POL_HV1OYHuman immunodeficiency virus type 1 group M subtype B (isolate OYI) (HIV-1)
POL_HV1RHHuman immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3) (HIV-1)
POL_HV1Y2Human immunodeficiency virus type 1 group M subtype B (isolate YU-2) (HIV-1)
POL_HV1B9Human immunodeficiency virus type 1 group M subtype B (strain 89.6) (HIV-1)
POL_HV192Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025) (HIV-1)
POL_HV1ETHuman immunodeficiency virus type 1 group M subtype C (isolate ETH2220) (HIV-1)
POL_HV1ELHuman immunodeficiency virus type 1 group M subtype D (isolate ELI) (HIV-1)
POL_HV1NDHuman immunodeficiency virus type 1 group M subtype D (isolate NDK) (HIV-1)
POL_HV1Z2Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34) ...
POL_HV193Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020) (HIV-1)
POL_HV1VIHuman immunodeficiency virus type 1 group M subtype F1 (isolate VI850) (HIV-1)
POL_HV1MPHuman immunodeficiency virus type 1 group M subtype F2 (isolate MP255) (HIV-1)
POL_HV1M2Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257) (HIV-1)
POL_HV19NHuman immunodeficiency virus type 1 group M subtype G (isolate 92NG083) (HIV-1)
POL_HV1SEHuman immunodeficiency virus type 1 group M subtype G (isolate SE6165) (HIV-1)
POL_HV190Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056) (HIV-1)
POL_HV1V9Human immunodeficiency virus type 1 group M subtype H (isolate VI991) (HIV-1)
POL_HV1S9Human immunodeficiency virus type 1 group M subtype J (isolate SE9173) (HIV-1)
POL_HV1S2Human immunodeficiency virus type 1 group M subtype J (isolate SE9280) (HIV-1)
POL_HV196Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535) ...
POL_HV197Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11) ...
POL_HV1YBHuman immunodeficiency virus type 1 group N (isolate YBF106) (HIV-1)
POL_HV1YFHuman immunodeficiency virus type 1 group N (isolate YBF30) (HIV-1)
POL_HV1ANHuman immunodeficiency virus type 1 group O (isolate ANT70) (HIV-1)
POL_HV1MVHuman immunodeficiency virus type 1 group O (isolate MVP5180) (HIV-1)
POL_HV2CAHuman immunodeficiency virus type 2 subtype A (isolate CAM2) (HIV-2)
POL_HV2D1Human immunodeficiency virus type 2 subtype A (isolate D194) (HIV-2)
POL_HV2G1Human immunodeficiency virus type 2 subtype A (isolate Ghana-1) (HIV-2)
POL_HV2KRHuman immunodeficiency virus type 2 subtype A (isolate KR) (HIV-2)
POL_HV2NZHuman immunodeficiency virus type 2 subtype A (isolate NIH-Z) (HIV-2)
POL_HV2ROHuman immunodeficiency virus type 2 subtype A (isolate ROD) (HIV-2)
POL_HV2SBHuman immunodeficiency virus type 2 subtype A (isolate SBLISY) (HIV-2)
POL_HV2STHuman immunodeficiency virus type 2 subtype A (isolate ST) (HIV-2)
POL_HV2D2Human immunodeficiency virus type 2 subtype B (isolate D205) (HIV-2)
POL_HV2EHHuman immunodeficiency virus type 2 subtype B (isolate EHO) (HIV-2)
POL_HV2UCHuman immunodeficiency virus type 2 subtype B (isolate UC1) (HIV-2)
POL_FOAMVHuman spumaretrovirus (SFVcpz(hu)) (Human foamy virus)

Pro-Pol polyprotein (Pr125Pol)

POL_SFV1Simian foamy virus type 1 (SFVmac) (SFV-1)

Pro-Pol polyprotein (Pr125Pol)

POL_SFV3LSimian foamy virus type 3 (strain LK3) (SFVagm) (SFV-3)

Pro-Pol polyprotein (Pr125Pol)

POL_SIVCZSimian immunodeficiency virus (isolate CPZ GAB1) (SIV-cpz) (Chimpanzee ...
POL_SIVEKSimian immunodeficiency virus (isolate EK505) (SIV-cpz) (Chimpanzee ...
POL_SIVS4Simian immunodeficiency virus (isolate F236/smH4) (SIV-sm) (Simian ...
POL_SIVGBSimian immunodeficiency virus (isolate GB1) (SIV-mnd) (Simian immunodeficiency ...
POL_SIVMKSimian immunodeficiency virus (isolate K6W) (SIV-mac) (Simian immunodeficiency ...
POL_SIVMBSimian immunodeficiency virus (isolate MB66) (SIV-cpz) (Chimpanzee ...
POL_SIVM1Simian immunodeficiency virus (isolate Mm142-83) (SIV-mac) (Simian ...
POL_SIVSPSimian immunodeficiency virus (isolate PBj14/BCL-3) (SIV-sm) (Simian ...
POL_SIVTNSimian immunodeficiency virus (isolate TAN1) (SIV-cpz) (Chimpanzee ...
POL_SIVG1Simian immunodeficiency virus agm.grivet (isolate AGM gr-1) (SIV-agm.gri) ...
POL_SIVVTSimian immunodeficiency virus agm.vervet (isolate AGM TYO-1) (SIV-agm.ver) ...
POL_SIVV1Simian immunodeficiency virus agm.vervet (isolate AGM155) (SIV-agm.ver) (Simian ...
POL_SIVVGSimian immunodeficiency virus agm.vervet (isolate AGM3) (SIV-agm.ver) (Simian ...

Small delta antigen (S-HDAg) (p24)

Select_all Deselect_all  
SHDAG_HDVD3Hepatitis delta virus genotype I (isolate D380) (HDV) reference strain
SHDAG_HDVAMHepatitis delta virus genotype I (isolate American) (HDV)
SHDAG_HDVITHepatitis delta virus genotype I (isolate Italian) (HDV)
SHDAG_HDVM1Hepatitis delta virus genotype I (isolate Japanese M-1) (HDV)
SHDAG_HDVM2Hepatitis delta virus genotype I (isolate Japanese M-2) (HDV)
SHDAG_HDVS2Hepatitis delta virus genotype I (isolate Japanese S-2) (HDV)
SHDAG_HDVL1Hepatitis delta virus genotype I (isolate Lebanon-1) (HDV)
SHDAG_HDVNAHepatitis delta virus genotype I (isolate Nauru) (HDV)
SHDAG_HDVU2Hepatitis delta virus genotype I (isolate US-2) (HDV)
SHDAG_HDVWOHepatitis delta virus genotype I (isolate Woodchuck) (HDV)
SHDAG_HDV83Hepatitis delta virus genotype II (isolate 7/18/83) (HDV)
SHDAG_HDVS1Hepatitis delta virus genotype II (isolate Japanese S-1) (HDV)
SHDAG_HDVTWHepatitis delta virus genotype II (isolate TW2476) (HDV)
SHDAG_HDVP1Hepatitis delta virus genotype III (isolate Peru-1) (HDV)
SHDAG_HDVV2Hepatitis delta virus genotype III (isolate VnzD8349) (HDV)
SHDAG_HDVV3Hepatitis delta virus genotype III (isolate VnzD8375) (HDV)
SHDAG_HDVV1Hepatitis delta virus genotype III (isolate VnzD8624) (HDV)

Virion-packaging protein UL25

Select_all Deselect_all  
UL25_HHV11Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain
UL25_HHV2HHuman herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain

Major core protein (Protein VII) (pVII)

Select_all Deselect_all  
VCO7_ADEG1Fowl adenovirus A serotype 1 (strain CELO / Phelps) (FAdV-1) (Avian adenovirus ... reference strain
VCO7_ADEB2Bovine adenovirus 2 (BAdV-2) (Mastadenovirus bos2)
VCO7_ADECCCanine adenovirus serotype 1 (strain CLL) (CAdV-1) (Canine adenovirus 1 (strain ...
VCO7_ADECRCanine adenovirus serotype 1 (strain RI261) (CAdV-1) (Canine adenovirus 1 ...
VCO7_ADECUCanine adenovirus serotype 1 (strain Utrecht) (CAdV-1) (Canine adenovirus 1 ...
VCO7_ADECTCanine adenovirus serotype 2 (strain Toronto A 26-61) (CAdV-2) (Canine ...
VCO7_ADE02Human adenovirus C serotype 2 (HAdV-2) (Human adenovirus 2)
VCO7_ADE05Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5)
VCO7_ADE04Human adenovirus E serotype 4 (HAdV-4) (Human adenovirus 4)
VCO7_ADE40Human adenovirus F serotype 40 (HAdV-40) (Human adenovirus 40)
VCO7_ADEM1Murine adenovirus A serotype 1 (MAdV-1) (Murine adenovirus 1)

Minor capsid protein L2

Select_all Deselect_all  
VL2_BPV3Bovine papillomavirus type 3 reference strain
VL2_BPV5Bovine papillomavirus type 5 reference strain
VL2_COPV6Canine oral papillomavirus (strain Y62) (COPV) reference strain
VL2_CRPVKCottontail rabbit papillomavirus (strain Kansas) (CRPV) (Papillomavirus ... reference strain
VL2_PAPVEEuropean elk papillomavirus (EEPV) reference strain
VL2_HPV16Human papillomavirus type 16 reference strain
VL2_HPV1AHuman papillomavirus type 1a reference strain
VL2_HPV04Human papillomavirus type 4 reference strain
VL2_HPV41Human papillomavirus type 41 reference strain
VL2_HPV05Human papillomavirus type 5 reference strain
VL2_BPV1Bovine papillomavirus type 1
VL2_BPV2Bovine papillomavirus type 2
VL2_BPV4Bovine papillomavirus type 4
VL2_PAPVDDeer papillomavirus (DPV) (Deer fibroma virus)
VL2_HPV10Human papillomavirus type 10
VL2_HPV11Human papillomavirus type 11
VL2_HPV12Human papillomavirus type 12
VL2_HPV13Human papillomavirus type 13
VL2_HPV14Human papillomavirus type 14
VL2_HPV15Human papillomavirus type 15
VL2_HPV17Human papillomavirus type 17
VL2_HPV18Human papillomavirus type 18
VL2_HPV19Human papillomavirus type 19
VL2_HPV20Human papillomavirus type 20
VL2_HPV21Human papillomavirus type 21
VL2_HPV22Human papillomavirus type 22
VL2_HPV23Human papillomavirus type 23
VL2_HPV24Human papillomavirus type 24
VL2_HPV25Human papillomavirus type 25
VL2_HPV26Human papillomavirus type 26
VL2_HPV27Human papillomavirus type 27
VL2_HPV28Human papillomavirus type 28
VL2_HPV29Human papillomavirus type 29
VL2_HPV2AHuman papillomavirus type 2a
VL2_HPV03Human papillomavirus type 3
VL2_HPV30Human papillomavirus type 30
VL2_HPV31Human papillomavirus type 31
VL2_HPV32Human papillomavirus type 32
VL2_HPV33Human papillomavirus type 33
VL2_HPV34Human papillomavirus type 34
VL2_HPV35Human papillomavirus type 35
VL2_HPV36Human papillomavirus type 36
VL2_HPV37Human papillomavirus type 37
VL2_HPV38Human papillomavirus type 38
VL2_HPV39Human papillomavirus type 39
VL2_HPV40Human papillomavirus type 40
VL2_HPV42Human papillomavirus type 42
VL2_HPV43Human papillomavirus type 43
VL2_HPV44Human papillomavirus type 44
VL2_HPV45Human papillomavirus type 45
VL2_HPV47Human papillomavirus type 47
VL2_HPV48Human papillomavirus type 48
VL2_HPV49Human papillomavirus type 49
VL2_HPV50Human papillomavirus type 50
VL2_HPV51Human papillomavirus type 51
VL2_HPV52Human papillomavirus type 52
VL2_HPV53Human papillomavirus type 53
VL2_HPV54Human papillomavirus type 54
VL2_HPV55Human papillomavirus type 55
VL2_HPV56Human papillomavirus type 56
VL2_HPV57Human papillomavirus type 57
VL2_HPV58Human papillomavirus type 58
VL2_HPV5BHuman papillomavirus type 5b
VL2_HPV60Human papillomavirus type 60
VL2_HPV61Human papillomavirus type 61
VL2_HPV62Human papillomavirus type 62
VL2_HPV63Human papillomavirus type 63
VL2_HPV65Human papillomavirus type 65
VL2_HPV66Human papillomavirus type 66
VL2_HPV67Human papillomavirus type 67
VL2_HPV69Human papillomavirus type 69
VL2_HPV6AHuman papillomavirus type 6a
VL2_HPV6BHuman papillomavirus type 6b
VL2_HPV07Human papillomavirus type 7
VL2_HPV70Human papillomavirus type 70
VL2_HPV08Human papillomavirus type 8
VL2_HPV82Human papillomavirus type 82
VL2_HPV09Human papillomavirus type 9
VL2_HPVMEHuman papillomavirus type ME180
VL2_PCPV1Pygmy chimpanzee papillomavirus type 1 (PCPV-1)
VL2_RHPV1Rhesus papillomavirus type 1 (Rhpv 1)

Minor capsid protein VP2 (Minor structural protein VP2)

Select_all Deselect_all  
VP2_SV40Simian virus 40 (SV40) reference strain
VP2_POVLYB-lymphotropic polyomavirus (LPV)
VP2_POVBKBK polyomavirus (BKPyV)
VP2_POVBABK polyomavirus (strain AS) (BKPyV)
VP2_POVBOBovine polyomavirus (BPyV)
VP2_BFPYVBudgerigar fledgling disease virus (BFPyV)
VP2_POVHAHamster polyomavirus (HaPyV)
VP2_POVJCJC polyomavirus (JCPyV) (JCV)
VP2_POVKIKI polyomavirus (isolate Stockholm 350) (KIPyV)
VP2_POVM3Murine polyomavirus (strain 3) (MPyV)
VP2_POVMAMurine polyomavirus (strain A2) (MPyV)
VP2_POVMCMurine polyomavirus (strain Crawford small-plaque) (MPyV)
VP2_POVMKMurine polyomavirus (strain Kilham) (MPyV) (Murine pneumotropic virus)
VP2_POVS1Simian virus 12 (strain wt100) (SV-12) (Baboon polyomavirus 1)
VP2_POVSMSquirrel monkey polyomavirus
VP2_POVWUWU polyomavirus (WUPyV)

Protein Vpr (R ORF protein) (Viral protein R)

Select_all Deselect_all  
VPR_HV1H2Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) (HIV-1) reference strain
VPR_HV2BEHuman immunodeficiency virus type 2 subtype A (isolate BEN) (HIV-2) reference strain
VPR_HV1MAHuman immunodeficiency virus type 1 group M subtype A (isolate MAL) (HIV-1)
VPR_HV1A2Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2) (HIV-1)
VPR_HV1B1Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)
VPR_HV1B5Human immunodeficiency virus type 1 group M subtype B (isolate BH5) (HIV-1)
VPR_HV1BRHuman immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI) (HIV-1)
VPR_HV1H3Human immunodeficiency virus type 1 group M subtype B (isolate HXB3) (HIV-1)
VPR_HV1JRHuman immunodeficiency virus type 1 group M subtype B (isolate JRCSF) (HIV-1)
VPR_HV1MNHuman immunodeficiency virus type 1 group M subtype B (isolate MN) (HIV-1)
VPR_HV1N5Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1)
VPR_HV1OYHuman immunodeficiency virus type 1 group M subtype B (isolate OYI) (HIV-1)
VPR_HV112Human immunodeficiency virus type 1 group M subtype B (isolate PCV12) (HIV-1)
VPR_HV1RHHuman immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3) (HIV-1)
VPR_HV1SCHuman immunodeficiency virus type 1 group M subtype B (isolate SC) (HIV-1)
VPR_HV1S3Human immunodeficiency virus type 1 group M subtype B (isolate SF33) (HIV-1)
VPR_HV1Y2Human immunodeficiency virus type 1 group M subtype B (isolate YU-2) (HIV-1)
VPR_HV1B9Human immunodeficiency virus type 1 group M subtype B (strain 89.6) (HIV-1)
VPR_HV192Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025) (HIV-1)
VPR_HV1ETHuman immunodeficiency virus type 1 group M subtype C (isolate ETH2220) (HIV-1)
VPR_HV1ELHuman immunodeficiency virus type 1 group M subtype D (isolate ELI) (HIV-1)
VPR_HV1Z2Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34) ...
VPR_HV193Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020) (HIV-1)
VPR_HV1VIHuman immunodeficiency virus type 1 group M subtype F1 (isolate VI850) (HIV-1)
VPR_HV1MPHuman immunodeficiency virus type 1 group M subtype F2 (isolate MP255) (HIV-1)
VPR_HV1M2Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257) (HIV-1)
VPR_HV19NHuman immunodeficiency virus type 1 group M subtype G (isolate 92NG083) (HIV-1)
VPR_HV1SEHuman immunodeficiency virus type 1 group M subtype G (isolate SE6165) (HIV-1)
VPR_HV190Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056) (HIV-1)
VPR_HV1V9Human immunodeficiency virus type 1 group M subtype H (isolate VI991) (HIV-1)
VPR_HV1S9Human immunodeficiency virus type 1 group M subtype J (isolate SE9173) (HIV-1)
VPR_HV1S2Human immunodeficiency virus type 1 group M subtype J (isolate SE9280) (HIV-1)
VPR_HV196Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535) ...
VPR_HV197Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11) ...
VPR_HV1YBHuman immunodeficiency virus type 1 group N (isolate YBF106) (HIV-1)
VPR_HV1YFHuman immunodeficiency virus type 1 group N (isolate YBF30) (HIV-1)
VPR_HV1ANHuman immunodeficiency virus type 1 group O (isolate ANT70) (HIV-1)
VPR_HV1MVHuman immunodeficiency virus type 1 group O (isolate MVP5180) (HIV-1)
VPR_HV2CAHuman immunodeficiency virus type 2 subtype A (isolate CAM2) (HIV-2)
VPR_HV2D1Human immunodeficiency virus type 2 subtype A (isolate D194) (HIV-2)
VPR_HV2G1Human immunodeficiency virus type 2 subtype A (isolate Ghana-1) (HIV-2)
VPR_HV2KRHuman immunodeficiency virus type 2 subtype A (isolate KR) (HIV-2)
VPR_HV2NZHuman immunodeficiency virus type 2 subtype A (isolate NIH-Z) (HIV-2)
VPR_HV2ROHuman immunodeficiency virus type 2 subtype A (isolate ROD) (HIV-2)
VPR_HV2SBHuman immunodeficiency virus type 2 subtype A (isolate SBLISY) (HIV-2)
VPR_HV2STHuman immunodeficiency virus type 2 subtype A (isolate ST) (HIV-2)
VPR_HV2D2Human immunodeficiency virus type 2 subtype B (isolate D205) (HIV-2)
VPR_HV2EHHuman immunodeficiency virus type 2 subtype B (isolate EHO) (HIV-2)

Protein Vpr (Viral protein R)

VPR_HV2UCHuman immunodeficiency virus type 2 subtype B (isolate UC1) (HIV-2)
VPR_SIVCZSimian immunodeficiency virus (isolate CPZ GAB1) (SIV-cpz) (Chimpanzee ...
VPR_SIVEKSimian immunodeficiency virus (isolate EK505) (SIV-cpz) (Chimpanzee ...
VPR_SIVS4Simian immunodeficiency virus (isolate F236/smH4) (SIV-sm) (Simian ...
VPR_SIVGBSimian immunodeficiency virus (isolate GB1) (SIV-mnd) (Simian immunodeficiency ...
VPR_SIVMKSimian immunodeficiency virus (isolate K6W) (SIV-mac) (Simian immunodeficiency ...
VPR_SIVMLSimian immunodeficiency virus (isolate K78) (SIV-mac) (Simian immunodeficiency ...
VPR_SIVMBSimian immunodeficiency virus (isolate MB66) (SIV-cpz) (Chimpanzee ...
VPR_SIVM1Simian immunodeficiency virus (isolate Mm142-83) (SIV-mac) (Simian ...
VPR_SIVSPSimian immunodeficiency virus (isolate PBj14/BCL-3) (SIV-sm) (Simian ...
VPR_SIVTNSimian immunodeficiency virus (isolate TAN1) (SIV-cpz) (Chimpanzee ...

Nucleoprotein (N protein) (Nucleocapsid protein) (p38) (p40)


WNCAP_BDVBorna disease virus (BDV)