Podoviridae

Molecular biology

VIRION

Nonenveloped, head-tail structure. Head is about 60 nm in diameter. The tail is non-contractile, has 6 short subterminal fibers. The capsid is icosahedral with a T=7 symmetry.

GENOME

Linear, dsDNA genome of about 40-42 kb encoding for 55 genes.

GENE EXPRESSION

REPLICATION

CYTOPLASMIC

  1. Adsorption: the phage attaches to target cell through its tail fibers.
  2. Injection: viral DNA is injected in host cell periplasm
  3. Transcription and traduction of early genes
  4. Replication of genomic DNA
  5. Transcription and traduction of late genes
  6. Assembly of new virions in host cell cytoplasm
  7. Mature virions are released from the cell by lysis

Matching UniProtKB/Swiss-Prot entries

324 entries grouped by strain

All proteins are shown (view only 147 complete proteome entries)

64 entries

Enterobacteria phage P22 (Bacteriophage P22) reference strain

Select_all Deselect_all  
ABC1_BPP22Anti-RecBCD protein 1 (Protein abc1)
ABC2_BPP22Anti-RecBCD protein 2 (Protein abc2)
ENPP_BPP22Probable endopeptidase (EC 3.4.-.-) (Protein gp15)
ERF_BPP22Essential recombination function protein
GTRA_BPP22Bactoprenol-linked glucose translocase
GTRB_BPP22Bactoprenol glucosyl transferase (EC 2.4.1.-)
LYS_BPP22Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
NINB_BPP22Protein ninB
NIND_BPP22Protein ninD
NINE_BPP22Protein ninE
NINF_BPP22Protein ninF
NING_BPP22Protein ninG
NINH_BPP22Protein ninH
NINX_BPP22Putative protein ninX
NINY_BPP22Putative protein ninY
PORTL_BPP22Portal protein (Protein gp1)
RANT_BPP22Antirepressor protein ant
RARC_BPP22Transcriptional repressor arc
RCRO_BPP22Regulatory protein cro (Antirepressor)
REGN_BPP22Probable regulatory protein N
REGQ_BPP22Antitermination protein (Protein gp23)
RMNT_BPP22Regulatory protein mnt
RPC1_BPP22Transcriptional activator protein C1
RPC2_BPP22Repressor protein C2
RPC3_BPP22Regulatory protein C3 (CIII)
SIEA_BPP22Superinfection exclusion protein A
SIEB_BPP22Superinfection exclusion protein B
TERL_BPP22Large terminase protein (DNA-packaging protein gp2) (Terminase large subunit)
TERM_BPP22DNA-packaging protein gp3 (Terminase small subunit)
TSPE_BPP22Bifunctional tail protein (Late protein gp9)
VARF_BPP22Accessory recombination function protein
VEAA_BPP22Eaa protein
VEAC_BPP22Eac protein
VEAD_BPP22Ead protein
VEAE_BPP22Eae protein
VEAF_BPP22Eaf protein
VEAG_BPP22Eag protein
VEAI_BPP22Eai protein
VG04_BPP22Packaged DNA stabilization protein gp4
VG05_BPP22Coat protein (Protein gp5)
VG07_BPP22DNA transfer protein gp7
VG08_BPP22Scaffolding protein (Protein gp8)
VG10_BPP22Packaged DNA stabilization protein gp10
VG12_BPP22Replicative DNA helicase (EC 3.6.4.12) (Replication protein gp12)
VG14_BPP22Protein gp14
VG16_BPP22DNA transfer protein gp16
VG17_BPP22Superinfection exclusion protein (Protein gp17)
VG18_BPP22DNA replication protein gp18
VG20_BPP22DNA transfer protein gp20
VG26_BPP22Tail needle protein gp26 (Head completion protein) (Packaged DNA stabilization ...
VINT_BPP22Integrase
VKIL_BPP22Protein kil
VLY1_BPP22Holin (Lysis protein 13)
VRAL_BPP22Restriction inhibitor protein ral (Antirestriction protein)
VXIS_BPP22Excisionase
Y23K_BPP22Uncharacterized 22.8 kDa protein in gp15-gp3 intergenic region (ORF201)
Y55K_BPP22Uncharacterized 55.3 kDa protein in gtrB 5'region (ORF485)
Y6K4_BPP22Uncharacterized 6.4 kDa protein in sieA-mnt intergenic region (ORF59A)
Y6K6_BPP22Uncharacterized 6.6 kDa protein in eae-abc2 intergenic region (ORF56)
Y7K7_BPP22Uncharacterized 7.7 kDa protein in gp5-gp4 intergenic region (ORF 109) (ORF69)
Y7K8_BPP22Uncharacterized 7.8 kDa protein in ral-gp17 intergenic region (ORF67)
Y8K6_BPP22Uncharacterized 8.6 kDa protein in ral-gp17 intergenic region (ORF78)
Y9K0_BPP22Uncharacterized 9.0 kDa protein in gp15-gp3 intergenic region (ORF80)
YO48_BPP22Uncharacterized 5.8 kDa protein (ORF48)

56 entries

Enterobacteria phage T7 (Bacteriophage T7) reference strain

Select_all Deselect_all  
DNLI_BPT7DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase
DPOL_BPT7DNA polymerase (EC 2.7.7.7) (T7 DNA polymerase)
ENPP_BPT7Probable endopeptidase (EC 3.4.-.-)
ENRN_BPT7Endodeoxyribonuclease 1 (EC 3.1.21.2) (Endodeoxyribonuclease I) (Endonuclease)
EXRN_BPT7Exodeoxyribonuclease (Exonuclease) (EC 3.1.11.3)
KIPA_BPT7Protein kinase (EC 2.7.11.1)
NAAA_BPT7N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (T7 lysozyme)
PRIM_BPT7DNA primase/helicase (EC 2.7.7.-) (EC 3.6.4.12)
RPOL_BPT7DNA-directed RNA polymerase (EC 2.7.7.6)
V03_BPT7Gene 0.3 protein
V04_BPT7Gene 0.4 protein
V05_BPT7Gene 0.5 protein
V06_BPT7Protein 0.6B
V11_BPT7Gene 1.1 protein
V12_BPT7Gene 1.2 protein
V17_BPT7Gene 1.7 protein
V187_BPT7Gene 18.7 protein
V192_BPT7Gene 19.2 protein
V193_BPT7Gene 19.3 protein
V42_BPT7Gene 4.2 protein
V43_BPT7Gene 4.3 protein
V45_BPT7Gene 4.5 protein
V47_BPT7Gene 4.7 protein
V55_BPT7Gene 5.5/5.7 fusion protein
V59_BPT7Gene 5.9 protein
VC10A_BPT7Major capsid protein 10A
VC10B_BPT7Minor capsid protein 10B
VCAP_BPT7Capsid assembly protein (Scaffolding protein)
VDMA_BPT7DNA maturase A (DNA-packaging protein A) (GP18)
VDMB_BPT7DNA maturase B (DNA-packaging protein B) (GP19)
VHED_BPT7Helix-destabilizing protein (Single-stranded DNA-binding protein) (SSB protein)
VHSA_BPT7Host specificity protein A
VHSB_BPT7Host specificity protein B
VHTJ_BPT7Head-to-tail joining protein
VIVA_BPT7Internal virion protein A
VIVB_BPT7Internal virion protein B
VIVC_BPT7Internal virion protein C
VIVD_BPT7Internal virion protein D
VLYS_BPT7Lysis protein
VRPI_BPT7Bacterial RNA polymerase inhibitor
VTFP_BPT7Tail fiber protein
VTTA_BPT7Tail tubular protein A
VTTB_BPT7Tail tubular protein B
Y14_BPT7Uncharacterized gene 1.4 protein
Y15_BPT7Uncharacterized gene 1.5 protein
Y16_BPT7Uncharacterized gene 1.6 protein
Y18_BPT7Uncharacterized gene 1.8 protein
Y195_BPT7Uncharacterized gene 19.5 protein
Y28_BPT7Uncharacterized gene 2.8 protein
Y38_BPT7Uncharacterized gene 3.8 protein
Y41_BPT7Uncharacterized gene 4.1 protein
Y53_BPT7Uncharacterized gene 5.3 protein
Y63_BPT7Uncharacterized gene 6.3 protein
Y65_BPT7Uncharacterized gene 6.5 protein
Y67_BPT7Uncharacterized gene 6.7 protein
Y77_BPT7Uncharacterized gene 7.7 protein

24 entries

Bacillus phage phi29 (Bacteriophage phi-29) reference strain

Select_all Deselect_all  
DPOL_BPPH2DNA polymerase (EC 2.7.7.7) (Early protein GP2)
HEAD_BPPH2Major head protein (Late protein Gp8)
LYS_BPPH2Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Morphogenesis protein 2) ...
SSB_BPPH2Single-strand-binding protein (SSB) (Early protein GP5)
TERM_BPPH2DNA terminal protein (Protein Gp3)
VG10_BPPH2Upper collar protein (Connector protein) (Late protein GP10)
VG11_BPPH2Lower collar protein (Late protein GP11)
VG12_BPPH2Pre-neck appendage protein (Late protein GP12)
VG13_BPPH2Morphogenesis protein 1 (Late protein GP13)
VG14_BPPH2Lysis protein (Late protein GP14)
VG165_BPPH2Early protein GP16.5
VG166_BPPH2Early protein GP16.6
VG167_BPPH2Early protein GP16.7
VG168_BPPH2Early protein GP16.8
VG169_BPPH2Early protein GP16.9
VG16_BPPH2Encapsidation protein (Late protein GP16)
VG17_BPPH2Early protein GP17
VG1_BPPH2Early protein GP1
VG4_BPPH2Late genes activator (Early protein GP4)
VG5B_BPPH2Early protein GP5B
VG6_BPPH2Early protein GP6
VG7_BPPH2Head morphogenesis protein (Late protein GP7)
VG85_BPPH2Head fiber protein (Late protein GP8.5)
VG9_BPPH2Tail protein (Late protein GP9)

2 entries

Enterobacteria phage N4 (Bacteriophage N4) reference strain

Select_all Deselect_all  
YLF1_BPN4Uncharacterized protein Gp1 (12 kDa protein in genome left end) (ORF 1)
YLF2_BPN4Uncharacterized protein Gp2 (ORF 2)

1 entry

Enterobacteria phage SP6 (Bacteriophage SP6) reference strain


RPOL_BPSP6DNA-directed RNA polymerase (EC 2.7.7.6)

43 entries

Acyrthosiphon pisum secondary endosymbiont phage 1 (Bacteriophage APSE-1)

Select_all Deselect_all  
DPOL_BPAPSProbable DNA polymerase (EC 2.7.7.7) (P45)
HEAD_BPAPSMajor head protein (Major coat protein) (p24)
LYS_BPAPSProbable lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase) (P13)
REGQ_BPAPSProbable antitermination protein Q (P5)
TFA_BPAPSProbable tail fiber assembly protein (P37)
VLYS_BPAPSPutative lysis protein S (p11)
VP02_BPAPSPutative protein P2
VP04_BPAPSPutative protein p4
VP06_BPAPSPutative protein p6
VP07_BPAPSPutative protein p7
VP08_BPAPSPutative protein p8
VP09_BPAPSPutative protein p9
VP10_BPAPSPutative protein p10
VP12_BPAPSPutative protein p12
VP14_BPAPSPutative protein p14
VP15_BPAPSPutative protein p15
VP16_BPAPSPutative protein p16
VP17_BPAPSPutative protein p17
VP19_BPAPSPutative portal protein p19
VP20_BPAPSPutative protein p20
VP21_BPAPSPutative protein p21
VP22_BPAPSPutative protein p22
VP25_BPAPSPutative protein p25
VP26_BPAPSPutative protein p26
VP27_BPAPSPutative packaged DNA stabilization protein p27
VP29_BPAPSPutative protein p29
VP31_BPAPSPutative protein p31
VP32_BPAPSPutative DNA transfer protein p32
VP33_BPAPSPutative DNA transfer protein p33
VP34_BPAPSPutative protein p34
VP35_BPAPSPutative DNA transfer protein p35
VP36_BPAPSPutative tailspike protein p36
VP39_BPAPSPutative protein p39
VP41_BPAPSPutative protein p41
VP44_BPAPSPutative nuclease p44 (EC 3.1.-.-)
VP47_BPAPSPutative protein p47
VP49_BPAPSPutative protein p49
VP50_BPAPSPutative protein p50
VP51_BPAPSPutative protein p51
VP52_BPAPSPutative protein p52
VP53_BPAPSPutative protein p53
VP54_BPAPSPutative protein p54
VXIS_BPAPSProbable excisionase (p40)

43 entries

Enterobacteria phage T3 (Bacteriophage T3)

Select_all Deselect_all  
ADOM_BPT3S-adenosyl-L-methionine hydrolase (ADOMetase) (Adenosylmethionine hydrolase) ...
DNLI_BPT3DNA ligase (EC 6.5.1.1) (Polydeoxyribonucleotide synthase
DPOL_BPT3DNA polymerase (EC 2.7.7.7)
ENPP_BPT3Probable endopeptidase (EC 3.4.-.-)
ENRN_BPT3Endodeoxyribonuclease 1 (EC 3.1.21.2) (Endodeoxyribonuclease I) (Endonuclease)
EXRN_BPT3Exodeoxyribonuclease (Exonuclease) (EC 3.1.11.3)
NAAA_BPT3N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) (T3 lysozyme)
PRIM_BPT3DNA primase/helicase (EC 2.7.7.-) (EC 3.6.4.12)
RPOL_BPT3DNA-directed RNA polymerase (EC 2.7.7.6)
V11_BPT3Gene 1.1 protein
V12_BPT3Gene 1.2 protein
V17_BPT3Gene 1.7 protein
V187_BPT3Gene 18.7 protein
V192_BPT3Gene 19.2 protein
V193_BPT3Gene 19.3 protein
V42_BPT3Gene 4.2 protein
V43_BPT3Gene 4.3 protein
V45_BPT3Gene 4.5 protein
V55_BPT3Gene 5.5 protein
V57_BPT3Gene 5.7 protein
V59_BPT3Gene 5.9 protein
VC10A_BPT3Major capsid protein 10A
VC10B_BPT3Minor capsid protein 10B
VCAP_BPT3Capsid assembly protein (Scaffolding protein)
VDMA_BPT3DNA maturase A (DNA-packaging protein A) (GP18)
VDMB_BPT3DNA maturase B (DNA-packaging protein B) (GP19)
VHED_BPT3Helix-destabilizing protein (Single-stranded DNA-binding protein) (SSB protein)
VHSB_BPT3Host specificity protein B
VHTJ_BPT3Head-to-tail joining protein
VLYS_BPT3Lysis protein
VRPI_BPT3Bacterial RNA polymerase inhibitor
VTFP_BPT3Tail fiber protein
Y105_BPT3Uncharacterized gene 1.05 protein
Y15_BPT3Uncharacterized gene 1.5 protein
Y16_BPT3Uncharacterized gene 1.6 protein
Y18_BPT3Uncharacterized gene 1.8 protein
Y195_BPT3Uncharacterized gene 19.5 protein
Y37_BPT3Uncharacterized gene 3.7 protein
Y51_BPT3Uncharacterized gene 5.1 protein
Y53_BPT3Uncharacterized gene 5.3 protein
Y63_BPT3Uncharacterized gene 6.3 protein
Y65_BPT3Uncharacterized gene 6.5 protein
Y67_BPT3Uncharacterized gene 6.7 protein

26 entries

Bacillus phage PZA (Bacteriophage PZA)

Select_all Deselect_all  
DPOL_BPPZADNA polymerase (EC 2.7.7.7) (Early protein GP2)
HEAD_BPPZAMajor head protein (Late protein Gp8)
LYS_BPPZALysozyme (EC 3.2.1.17) (Endolysin) (Late protein gp15) (Lysis protein) ...
SSB_BPPZASingle-strand-binding protein (SSB) (Early protein GP5)
TERM_BPPZADNA terminal protein (Protein GP3)
VG10_BPPZAUpper collar protein (Connector protein) (Late protein GP10)
VG11_BPPZALower collar protein (Late protein GP11)
VG12_BPPZAPre-neck appendage protein (Late protein GP12)
VG13_BPPZAMorphogenesis protein 1 (Late protein GP13)
VG14_BPPZALysis protein (Late protein GP14)
VG165_BPPZAEarly protein GP16.5
VG166_BPPZAEarly protein GP16.6
VG167_BPPZAEarly protein GP16.7
VG168_BPPZAEarly protein GP16.8
VG169_BPPZAEarly protein GP16.9
VG16_BPPZAEncapsidation protein (Late protein GP16)
VG17_BPPZAEarly protein GP17
VG1A_BPPZAEarly protein GP1A
VG1B_BPPZAEarly protein GP1B
VG1C_BPPZAEarly protein GP1C
VG4_BPPZALate genes activator (Early protein GP4)
VG5B_BPPZAEarly protein GP5B
VG6_BPPZAEarly protein GP6
VG7_BPPZAHead morphogenesis protein (Late protein GP7)
VG85_BPPZAHead fiber protein (Late protein GP8.5)
VG9_BPPZATail protein (Late protein GP9)

17 entries

Bacillus phage B103 (Bacteriophage B103)

Select_all Deselect_all  
DPOL_BPB03DNA polymerase (EC 2.7.7.7) (Early protein GP2)
HEAD_BPB03Major head protein (Late protein Gp8)
LYS_BPB03Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Morphogenesis protein 2) ...
SSB_BPB03Single-strand-binding protein (SSB) (Early protein GP5)
TERM_BPB03DNA terminal protein (Protein GP3)
VG10_BPB03Upper collar protein (Connector protein) (Late protein GP10)
VG11_BPB03Lower collar protein (Late protein GP11)
VG12_BPB03Pre-neck appendage protein (Late protein GP12)
VG13_BPB03Morphogenesis protein 1 (Late protein GP13)
VG14_BPB03Lysis protein (Late protein GP14)
VG16_BPB03Encapsidation protein (Late protein GP16)
VG17_BPB03Early protein GP17
VG4_BPB03Late genes activator (Early protein GP4)
VG6_BPB03Early protein GP6
VG7_BPB03Head morphogenesis protein (Late protein GP7)
VG85_BPB03Head fiber protein (Late protein GP8.5)
VG9_BPB03Tail protein (Late protein GP9)

8 entries

Enterobacteria phage 933W (Bacteriophage 933W)

Select_all Deselect_all  
LYS_BP933Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
NINE_BP933Protein ninE
NING_BP933Protein ninG
NINH_BP933Protein ninH
REGQ_BP933Antitermination protein Q
RZ1_BP933Outer membrane lipoprotein Rz1
STXA_BP933Shiga-like toxin 2 subunit A (SLT-2 A subunit) (SLT-2a) (SLT-IIa) (EC 3.2.2.22) ...
STXB_BP933Shiga-like toxin 2 subunit B (SLT-2 B subunit) (SLT-2b) (SLT-IIb) ...

6 entries

Bacillus phage phi15 (Bacteriophage phi-15)

Select_all Deselect_all  
VG165_BPPH5Early protein GP16.5
VG166_BPPH5Early protein GP16.6
VG167_BPPH5Early protein GP16.7
VG168_BPPH5Early protein GP16.8
VG169_BPPH5Early protein GP16.9
VG17_BPPH5Early protein GP17

5 entries

Enterobacteria phage VT2-Sa (Bacteriophage VT2-Sa)

Select_all Deselect_all  
LYS_BPVT2Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase)
NINE_BPVT2Protein ninE
NING_BPVT2Protein ninG
NINH_BPVT2Protein ninH
REGQ_BPVT2Antitermination protein Q

5 entries

Streptococcus phage Cp-1 (Bacteriophage Cp-1)

Select_all Deselect_all  
DPOL_BPCP1DNA polymerase (EC 2.7.7.7)
HEAD_BPCP1Major head protein (Gp9)
LYS_BPCP1Lysozyme (EC 3.2.1.17) (CP-1 lysin) (Endolysin) (Muramidase)
TERM_BPCP1Terminal protein
VLYS_BPCP1Holin (Lysis protein)

4 entries

Enterobacteria phage Sf6 (Shigella flexneri bacteriophage VI) (Bacteriophage SfVI)

Select_all Deselect_all  
OAC_BPSFVO-acetyl transferase (EC 2.3.1.-) (O-antigen acetylase)
TSPE_BPSFVBifunctional tail protein
VINT_BPSFVIntegrase
VXIS_BPSFVProbable excisionase hkaC

3 entries

Bacillus phage Nf (Bacteriophage Nf)

Select_all Deselect_all  
TERM_BPNFDNA terminal protein (Protein GP3)
VG4_BPNFLate genes activator (Early protein GP4) (GPF)
VG85_BPNFHead fiber protein (Late protein GP8.5)

2 entries

Bacteriophage PS34

Select_all Deselect_all  
LYS_BPPS3Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase) (Protein gp19)
REGQ_BPPS3Antitermination protein (Protein gp23)

2 entries

Enterobacteria phage HK620 (Bacteriophage HK620)

Select_all Deselect_all  
VG07_BPHK6DNA transfer protein gp7
VXIS_BPHK6Probable excisionase hkaC

2 entries

Shigella phage 7888 (Shigella sonnei bacteriophage 7888)

Select_all Deselect_all  
STXA_BP788Shiga toxin subunit A (EC 3.2.2.22)
STXB_BP788Shiga toxin subunit B

1 entry

Bacillus phage GA-1 (Bacteriophage GA-1)


HEAD_BPGA1Major head protein

1 entry

Bacillus phage M2 (Bacteriophage M2)


DPOL_BPM2DNA polymerase (EC 2.7.7.7)

1 entry

Bacteriophage PS119


LYS_BPPS1Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Muramidase) (Protein gp19)

1 entry

Enterobacteria phage K11 (Bacteriophage K11)


RPOL_BPK11DNA-directed RNA polymerase (EC 2.7.7.6)

1 entry

Enterobacteria phage K1E (Bacteriophage K1E)


ENAN_BPK1EEndo-N-acetylneuraminidase (Endo-N) (EC 3.2.1.129) (Endosialidase)

1 entry

Enterobacteria phage K1F (Bacteriophage K1F)


ENAN_BPK1FEndo-N-acetylneuraminidase (Endo-N) (EC 3.2.1.129) (Endosialidase) (G102)

1 entry

Enterobacteria phage LP7 (Bacteriophage LP7)


TERM_BPLP7DNA-packaging protein gp3 (Terminase small subunit)

1 entry

Enterobacteria phage ST64T (Bacteriophage ST64T)


VG07_BPST6DNA transfer protein gp7

1 entry

Serratia phage KSP100 (Serratia marcescens bacteriophage KSP100)


CAPSD_BPSK1Major capsid protein (Virion protein G)

1 entry

Streptococcus phage Cp-7 (Bacteriophage Cp-7)


LYS_BPCP7Lysozyme (EC 3.2.1.17) (CP-7 lysin) (Endolysin) (Muramidase)

1 entry

Streptococcus phage Cp-9 (Bacteriophage Cp-9)


LYS_BPCP9Lysozyme (EC 3.2.1.17) (CP-9 lysin) (Endolysin) (Muramidase)