Nimaviridae (taxid:196937)

VIRION

image

Enveloped ovoidal particles of about 275 nm in length and 120 nm in width, with a tail-like appendage at one end.

GENOME

Circular dsDNA about 300 kb in size, encoding for at least 531 ORF.

GENE EXPRESSION

REPLICATION

NUCLEUS

DB LINKS image image

 image image

image
TAXONOMY Group I: dsDNA viruses
Family: Nimaviridae
Genus: Whispovirus
ETYMOLOGY Nima: from Latin "thread", reffering to virion flagelle
VIRUS
White spot syndrome virus
REFERENCE STRAIN Shrimp white spot syndrome virus
Sequence | Genome assembly | Proteome

Host

NATURAL HOSTS Crustaceans. The virus displays an unusual wide host range.
CELL TROPISM Tissues of ecto- and mesodermal origin

Ecology and disease

GEOGRAPHY Worldwide
ASSOCIATED DISEASES Shrimps: fatal lethargy, white spots
TRANSMISSION By predation on diseased animals or via water through the gills
ANTIVIRAL DRUGS

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

3 entries grouped by strain

3 entries

White spot syndrome virus (isolate Shrimp/China/Tongan/1996) (WSSV) (White spot bacilliform virus) reference strain

Select_allDeselect_all
UB222_WSSVS RING finger containing E3 ubiquitin-protein ligase WSV222 (EC 2.3.2.27) (RING-type E3 ubiquitin ...
UB403_WSSVS RING finger containing E3 ubiquitin-protein ligase WSV403 (EC 2.3.2.27) (RING-type E3 ubiquitin ...
ICP35_WSSVS ICP35
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

White spot syndrome virus taxid:342409

Protein ModelArchive
Anti-apoptosis protein (ORF170) ma-jd-viral-36883
Arv1-like family (ORF23) (ORF60) (WSV 477) (Wsv477) ma-jd-viral-57447
BESS motif (Immediate-early protein) (ORF137) (ORF55, gene family 5) (WSSV159)... ma-jd-viral-29552
BUD22 (Envelope protein) (ORF159) (ORF980) (Wsv327) ma-jd-viral-38245
BUD22 (ORF160) (WSSV088) (Wsv332) ma-jd-viral-49850
Bone sialoprotein II (BSP-II) (Envelope protein) (ORF1263) (ORF35) (Wsv010) ma-jd-viral-45024
Bone sialoprotein II (BSP-II) (Wsv037) ma-jd-viral-51665
Capsid protein (Envelope protein VP466) (ORF340) (PHB/PHA accumulation regulator DNA-binding domain) (WSSV078) (Wssv119)... ma-jd-viral-38916
Capsid protein (ORF183) (Wsv415) ma-jd-viral-31447
Capsid protein (Wsv220) ma-jd-viral-55524
Capsid protein (Wsv271) ma-jd-viral-52921
Centromere protein B dimerization domain (Envelope protein) (Major virion protein VP19) (ORF182) (ORF895) (WSSV111) (Wssv156)... ma-jd-viral-54336
DNA-binding protein (ORF109) (VP15) (Wsv214) ma-jd-viral-63059
Daxx family (ORF64) (Wsv090) ma-jd-viral-33759
Double zinc ribbon (ORF43) (Wsv045) ma-jd-viral-46218
E3 ligase (ORF113, gene family 9) (Wsv222) ma-jd-viral-49054
E3 ligase immediate-early protein (E3 ligase, immediate-early protein) (ORF177, gene family 9) (ORF429) (RING finger-containing E3 ubiquitin-protein ligase) (WSSV105) (Wssv152)... ma-jd-viral-39857
E3 ligase, immediate-early protein ma-jd-viral-41563
EXOG mitochondrial nuclease-like protein (Putative endonuclease) (WSSV031) ma-jd-viral-56214
Envelope and capsid protein (ORF6) (WSSV121) ma-jd-viral-58294
Envelope protein ma-jd-viral-51492
Envelope protein ma-jd-viral-52472
Envelope protein ma-jd-viral-59971
Envelope protein ma-jd-viral-55440
Envelope protein ma-jd-viral-55441
Envelope protein (Ephrin type-A receptor 2 transmembrane domain) (ORF36)... ma-jd-viral-53466
Envelope protein (FlgD Tudor-like domain) (ORF120, gene family 3) (Wsv242) ma-jd-viral-52511
Envelope protein (Major virion protein) (ORF1) (Structural envelope protein VP) (VP28)... ma-jd-viral-12526
Envelope protein (Nuclear RNA-splicing-associated protein) (ORF129, gene family 3) (ORF301) (WSSV056) (Wssv099)... ma-jd-viral-52512
Envelope protein (ORF1004) (ORF144) (Transcription factor TFIID) (WSSV071)... ma-jd-viral-44217
Envelope protein (ORF102) (ORF244) (Ring finger domain) (WSSV034) (Wsv198) ma-jd-viral-53087
Envelope protein (ORF118, gene family 10) (Wsv237) ma-jd-viral-59971
Envelope protein (ORF1264) (ORF34) (Wsv009) ma-jd-viral-39833
Envelope protein (ORF1268) (ORF31) (Structural envelope protein VP) (VP24)... ma-jd-viral-52004
Envelope protein (ORF127, gene family 10) (WSSV054) (Wssv097) (Wsv254) ma-jd-viral-59970
Envelope protein (ORF128, gene family 8) (ORF300) (WSSV055) (Wssv098) (Wsv256) ma-jd-viral-55442
Envelope protein (ORF150) (Thrombin inhibitor madanin) (Wsv306) ma-jd-viral-37136
Envelope protein (ORF155) ma-jd-viral-63520
Envelope protein (ORF158) (ORF356) (WSSV084) (Wsv325) ma-jd-viral-33264
Envelope protein (ORF161) (Wsv338) ma-jd-viral-62280
Envelope protein (ORF162) (Wsv339) ma-jd-viral-62997
Envelope protein (ORF163) (ORF973) (Wsv340) ma-jd-viral-52755
Envelope protein (ORF168) (Wsv386) ma-jd-viral-56165
Envelope protein (ORF41) ma-jd-viral-35728
Envelope protein (VP26) (ORF153) (ORF985) (Structural envelope protein VP) (WSSV080)... ma-jd-viral-12527
Fic/DOC family (ORF424) (Wsv397) ma-jd-viral-51320
Flagellar FliJ protein (ORF74) (Wsv126) ma-jd-viral-63309
Glycosyl hydrolase family 67 C-terminus (ORF95) (Wsv180) ma-jd-viral-54608
Helicase C-like protein (ORF39) (WSSV145) ma-jd-viral-59776
Histone acetyltransferase HAC5 (ORF166) (Putative CREB-binding protein immediate-early protein) (Putative CREB-binding protein, immediate-early protein)... ma-jd-viral-37042
ICP11/P9 (ORF115) (VP9 protein) (Wsv230) ma-jd-viral-46069
Immediate-early protein ma-jd-viral-33039
Immediate-early protein ma-jd-viral-36562
Immediate-early protein ma-jd-viral-41097
Immediate-early protein (ORF1200) (ORF60) (Ring finger domain) (Wsv079) ma-jd-viral-55126
Immediate-early protein (ORF1201) (Wssv029) (Wsv078) ma-jd-viral-64594
Immediate-early protein (ORF47, gene family 5) (Wsv056) ma-jd-viral-29553
Mediator complex subunit 2 (ORF145) (ORF332) (Wsv294) ma-jd-viral-52183
Minor capsid protein 2 (ORF124) (ORF294) (Wsv247) ma-jd-viral-53141
Nop14-like family (ORF164) (ORF972) (Wsv342) ma-jd-viral-36018
Normal lung function maintenance low in lung cancer 1 protein (ORF168) (ORF69)... ma-jd-viral-34063
Nuclear RNA-splicing-associated protein (ORF135) (ORF315) (WSSV062) (Wsv277) ma-jd-viral-59413
ORF10 (ORF36) (Wsv455) ma-jd-viral-49643
ORF100 (POPLD (NUC188) domain protein) (Wsv192) ma-jd-viral-32195
ORF101 (Wsv195) ma-jd-viral-67646
ORF1039 (ORF131) (WSSV058) (Wsv267) ma-jd-viral-29139
ORF1061 (WSSV050) (Wsv234) ma-jd-viral-46824
ORF107 (Per os infectivity) (Wsv207) ma-jd-viral-42862
ORF1085 (Wsv203) ma-jd-viral-65670
ORF1114 (ORF91) (Ribonucleotide reductase barrel domain) (Wsv166) ma-jd-viral-30793
ORF1115 (ORF90) ma-jd-viral-56930
ORF114 (VP9 protein) (Wssv085) ma-jd-viral-48670
ORF1144 (ORF83) (Wsv142) ma-jd-viral-64180
ORF1149 (ORF81) (Wsv137) ma-jd-viral-55816
ORF1156 (ORF76) (Wsv130) ma-jd-viral-64909
ORF121 ma-jd-viral-62678
ORF1212 (ORF53, gene family 7) (Wsv064) ma-jd-viral-47749
ORF1250 (ORF38) (ScpA/B protein) (Wssv011) (Wsv023) ma-jd-viral-32813
ORF1251 (ORF37) (WSSV143) (Wssv010) (Wsv021) ma-jd-viral-33134
ORF126, gene family 4 (WSSV053) (Wsv252) ma-jd-viral-52662
ORF1267 (ORF32) (Wsv004) ma-jd-viral-31848
ORF13 (Wsv460) ma-jd-viral-64388
ORF1314 (ORF22) (Putative zinc ribbon domain) (Wsv476) ma-jd-viral-66028
ORF132 (Wsv269) ma-jd-viral-52675
ORF133 (Wssv103) (Wsv270) ma-jd-viral-52752
ORF1348 (Putative serine/threonine protein kinase) (Serine/threonine-protein kinase prk-2)... ma-jd-viral-30616
ORF138 (Tuberin) (Wsv281) ma-jd-viral-44757
ORF139 (ORF57) (WSSV161) (Wssv026) (Wsv076) ma-jd-viral-53269
ORF14 ma-jd-viral-55110
ORF14 (Wsv432) ma-jd-viral-56702
ORF140 (Wsv282) ma-jd-viral-54417
ORF141 (ORF323) (WSSV068) (Wssv110) (Wsv284) ma-jd-viral-47451
ORF142 (WSSV069) ma-jd-viral-52162
ORF146 (ORF333) (Wsv295) ma-jd-viral-50291
ORF147 (PRANC domain) (WSSV074) (Wsv299) ma-jd-viral-42747
ORF148 (ORF998) (Structural envelope protein VP) (WSSV075) (Wssv116) (Wsv302) ma-jd-viral-53843
ORF149, putative TATA box binding protein (ORF337) (Putative TATA-box bind protein) (Transcription factor TFIID)... ma-jd-viral-36563
ORF152 (ORF341) (Wsv310) ma-jd-viral-67422
ORF156 (WSSV083) (Wssv124) (Wsv322) ma-jd-viral-33094
ORF17 (Wsv473) ma-jd-viral-65196
ORF173 (Wsv398) ma-jd-viral-39883
ORF174 (Wsv399) ma-jd-viral-43473
ORF178 (ORF431) (Ribonucleoside-diphosphate reductase small chain) (Wssv153)... ma-jd-viral-63771
ORF179 (ORF898) (RING finger-containing E3 ubiquitin-protein ligase) (Wsv407) ma-jd-viral-64332
ORF180 (Wsv411) ma-jd-viral-37239
ORF184 (ORF443) (Wsv420) ma-jd-viral-36609
ORF191 (ORF79) (WSSV010) (Wsv134) ma-jd-viral-48185
ORF192 (ORF80) (TMEM101 protein family) (Wssv050) (Wsv136) ma-jd-viral-35159
ORF234 (ORF97) (WSSV029) (Wsv184) ma-jd-viral-37788
ORF248 (Procyclic acidic repetitive protein (PARP)) (WSSV037) (Wssv075)... ma-jd-viral-01177
ORF25, gene family 4 (WSSV136) (Wsv508) ma-jd-viral-48592
ORF28 (Wsv525) ma-jd-viral-33593
ORF29 (Wsv526) ma-jd-viral-61768
ORF3 (WSSV118) (Wsv427) ma-jd-viral-35733
ORF4 (Procyclic acidic repetitive protein (PARP)) (WSSV119) (Wsv433) ma-jd-viral-33356
ORF436 (WSSV110) (Wssv155) (Wsv412) ma-jd-viral-45828
ORF44 (Wsv051) ma-jd-viral-48124
ORF442 (Wsv419) ma-jd-viral-33707
ORF56, gene family 8 (WSSV160) (Wsv073) ma-jd-viral-43587
ORF63 ma-jd-viral-50829
ORF67 (Wsv106) ma-jd-viral-36842
ORF73 (Wsv119) ma-jd-viral-64164
ORF77 (Wsv131) ma-jd-viral-67642
ORF78 (WSSV009) (Wsv133) ma-jd-viral-41445
ORF93 ma-jd-viral-40775
ORF96 (WSSV028) (Wsv181) ma-jd-viral-57785
ORF982 (WSSV085) (Wssv125) (Wsv324) ma-jd-viral-40694
Protein kinase, immediate-early protein (Wsv083) ma-jd-viral-30617
Putative transposase DNA-binding domain-containing protein ma-jd-viral-57916
RING-type domain-containing protein ma-jd-viral-47750
RNA binding motif (Wsv260) ma-jd-viral-58928
Ribonucleoside-diphosphate reductase (EC 1.17.4.1) ma-jd-viral-14305
Thymidine kinase (EC 2.7.1.21) (EC 2.7.4.9) (dTMP kinase) ma-jd-viral-09839
Uncharacterized protein ma-jd-viral-12529
Uncharacterized protein ma-jd-viral-33220
Uncharacterized protein ma-jd-viral-34329
Uncharacterized protein ma-jd-viral-50080
Uncharacterized protein ma-jd-viral-48591
Uncharacterized protein ma-jd-viral-39928
Uncharacterized protein ma-jd-viral-42450
Uncharacterized protein ma-jd-viral-43183
Uncharacterized protein ma-jd-viral-66582
Uncharacterized protein ma-jd-viral-58488
Uncharacterized protein ma-jd-viral-55111
WSSV135 (Wsv500) ma-jd-viral-57448
WSSV205 (Wsv149a) ma-jd-viral-54566
Wssv041 (p74 conserved region) ma-jd-viral-51306
Wssv172 ma-jd-viral-50981
Wsv006 ma-jd-viral-33473
Wsv059 ma-jd-viral-56924
Wsv077 ma-jd-viral-44457
Wsv108 ma-jd-viral-31016
Wsv139 ma-jd-viral-39167
Wsv147 ma-jd-viral-32881
Wsv150 ma-jd-viral-35843
Wsv151 ma-jd-viral-65806
Wsv231 ma-jd-viral-48593
Wsv313 ma-jd-viral-66119
Wsv387 ma-jd-viral-36229
Wsv440 ma-jd-viral-48773
Wsv446 ma-jd-viral-37434
Wsv464 ma-jd-viral-12528
Wsv479 ma-jd-viral-48594
Wsv482-like protein ma-jd-viral-62860
Wsv484 ma-jd-viral-43752
Wsv502 ma-jd-viral-30794
dUTP diphosphatase (EC 3.6.1.23) ma-jd-viral-56822
ribonucleoside-diphosphate reductase (EC 1.17.4.1) ma-jd-viral-05430
thymidylate synthase (EC 2.1.1.45) ma-jd-viral-08300

White spot syndrome virus taxid:92652

Protein ModelArchive
DNA binding protein (VP15) (Vp14) ma-jd-viral-63059
Envelope protein (VP19) (Structural protein VP19) (WSSV473) (Wsv414) ma-jd-viral-54336
Envelope protein (WSSV092) ma-jd-viral-35728
Envelope protein (WSSV396) (WSV340) ma-jd-viral-52755
ORF1050 ma-jd-viral-59970
ORF1056 ma-jd-viral-55442
ORF15 (WSSV523) ma-jd-viral-12528
ORF1976 ma-jd-viral-58294
ORF21 ma-jd-viral-53466
ORF2359 ma-jd-viral-61768
ORF2735 ma-jd-viral-35733
ORF2877 ma-jd-viral-56165
ORF4010 ma-jd-viral-67642
ORF4162 ma-jd-viral-55126
ORF4427 ma-jd-viral-39833
ORF4441 ma-jd-viral-52004
ORF853 ma-jd-viral-55524
ORF948 ma-jd-viral-59971
ORF972 ma-jd-viral-52511
ORFIII ma-jd-viral-12529
ORFV ma-jd-viral-55441
Orf023 (Wsv023) ma-jd-viral-32813
Protein kinase (WSSV482) (Wsv423) ma-jd-viral-30616
Putative TATA-box binding protein (WSSV359) (Wsv303) ma-jd-viral-36563
Ribonucleoside-diphosphate reductase (EC 1.17.4.1) ma-jd-viral-14305
Structural protein (VP28) (Envelope protein VP28) (Major structural protein VP28) (Major virion protein VP28) (Vp28 structural protein) (WSSV480)... ma-jd-viral-12526
VP24 (Major virion protein VP24) (Wsv002) ma-jd-viral-52004
VP39 (WSSV395) (Wsv339) ma-jd-viral-62997
WSSV236 (Wsv180) ma-jd-viral-54608
WSSV237 (Wsv181) ma-jd-viral-57785
WSSV349 (Wsv293a) ma-jd-viral-44217
WSSV350 (Wsv294) ma-jd-viral-52183
WSSV355 (Wsv299) ma-jd-viral-42747
WSSV362 (Wsv306) ma-jd-viral-37136
WSSV446 (Wsv387) ma-jd-viral-36229
WSSV449 ma-jd-viral-36883
WSSV456 (Wsv397) ma-jd-viral-51320
WSSV458 ma-jd-viral-43473
Wsv295 ma-jd-viral-50291
p22 (Structural protein VP26) (Vp26) (Major virion protein VP26) (Vp26 structural protein) (WSSV367)... ma-jd-viral-12527
ribonucleoside-diphosphate reductase (EC 1.17.4.1) ma-jd-viral-05430