Lentivirus

Molecular biology

Enveloped, spherical to pleomorphic in shape, 80-100 nm in diameter. Mature capsid contains 1572 capsid proteins.

Monopartite, linear, dimeric, ssRNA(+) genome of 9,75 kb, with a 5’-cap and a 3’poly-A tail. There are two long terminal repeats (LTRs) of about 600nt long at the 5’ and 3’ ends. The LTRs contain the U3, R, and U5 regions. There are also a primer binding site (PBS) at the 5’end and a polypurine tract (PPT) at the 3’end.

GENE EXPRESSION

The integrated provirus utilizes the promotor elements in the 5’LTR to drive transcription. This gives rise to the unspliced full length mRNA that will serve as genomic RNA to be packaged into virions or used as a template for translation of gag and gag-(pro)pol (1 ribosomal frameshift) polyproteins. The uncompletely spliced mRNAs encode env that is cleaved into SU and TM envelope proteins, and the accessory proteins vif, vpu, and vpr. Completely spliced mRNAs encode Rev, Tat and Nef accessory proteins. Rev escorts unspliced and uncompletely spliced RNAs out of the nucleus of infected cells.

REPLICATION

NUCLEAR

Lytic replication:

  1. Virus attaches to host receptors through the SU glycoprotein (gp120), with subsequent interaction with a chemokine coreceptor. TM glycoprotein (gp41) mediates fusion with cell membrane.
  2. Internalization and partial uncoating.
  3. ssRNA(+) genome is copied into a linear dsDNA molecule by the reverse transcriptase.
  4. Nuclear entry of the viral dsDNA which is covalently and randomly integrated into the cell’s genome by the viral integrase (=provirus).
  5. Transcription of provirus by Pol II produces viral spliced and unspliced RNAs.
  6. Translation of spliced viral RNAs produces tat, rev, and nef proteins.
  7. Rev mediates nuclear export of the uncompletely spliced RNAs.
  8. Translation of unspliced viral RNAs produces Env, Gag and Gag-Pol polyproteins.
  9. Assembly of the virion at the host cellular membrane and packaging of the viral RNA genome.
  10. Budding through the plasma membrane and release of the virions.
  11. Proteolytic processing of the precursors polyproteins by viral protease and maturation of the virions.

Latent replication : replication as a provirus integrated in the host chromosome.

Host-virus interaction

Adaptive immune response inhibition

Lentiviruses have evolved different strategies to inhibit the host adaptive immune response. HIV-1 TAT acts at the transcriptional level by modifying proteasome composition by upregulating the LMP7 and MECL1 subunits and downregulating the LMP2 subunit, thereby promoting presentation of cryptic and subdominant CTL epitopes.

Three other HIV-1 proteins, Nef, Env and Vpu, contribute to downregulate CD4. Env forms a complex with CD4 in the endoplasmic reticulum, and retains the receptor in this compartment. Nef and Vpu target the receptor for degradation in the lysosome and the proteasome, respectively.

Apoptosis modulation

Vpr plays a role in the “induction of apoptosis” in HIV-1 infected cells via destabilization of the mitochondrial membrane leading to cytochrome C release and activation of the host caspase 9/3 pathway.

Autophagy modulation

HIV-1 Tat suppressed the induction of autophagy-associated genes and inhibited the formation of autophagosomes process ,.

Cell-cycle modulation

The Vpr protein form HIV-1 and HIV-2 induces a cell cycle arrest at G2/M transition through inactivation of the host cyclinB/cdc2 complex .

Innate immune response inhibition

Tat can inhibit PKR activity by both RNA-dependent and RNA-independent mechanisms .

Matching UniProtKB/Swiss-Prot entries

679 entries grouped by strain (browse by keywords)

All proteins are shown (view only 333 complete proteome entries)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate HXB2) (HIV-1) reference strain

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ENV_HV1H2Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1H2Gag polyprotein (Pr55Gag)
NEF_HV1H2Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1H2Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1H2Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1H2Protein Tat (Transactivating regulatory protein)
VIF_HV1H2Virion infectivity factor (Vif) (SOR protein)
VPR_HV1H2Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1H2Protein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate BEN) (HIV-2) reference strain

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ENV_HV2BEEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV2BEGag polyprotein (Pr55Gag)
NEF_HV2BEProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2BEGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2BEProtein Rev (Regulator of expression of viral proteins)
TAT_HV2BEProtein Tat (Transactivating regulatory protein)
VIF_HV2BEVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2BEProtein Vpr (R ORF protein) (Viral protein R)
VPX_HV2BEProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Human immunodeficiency virus type 1 group M subtype A (isolate MAL) (HIV-1)

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ENV_HV1MAEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1MAGag polyprotein (Pr55Gag)
NEF_HV1MAProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1MAGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1MAProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1MAProtein Tat (Transactivating regulatory protein)
VIF_HV1MAVirion infectivity factor (Vif) (SOR protein)
VPR_HV1MAProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1MAProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate ARV2/SF2) (HIV-1)

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ENV_HV1A2Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1A2Gag polyprotein (Pr55Gag)
NEF_HV1A2Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1A2Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1A2Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1A2Protein Tat (Transactivating regulatory protein)
VIF_HV1A2Virion infectivity factor (Vif) (SOR protein)
VPR_HV1A2Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1A2Protein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1)

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ENV_HV1B1Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1B1Gag polyprotein (Pr55Gag)
NEF_HV1B1Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1B1Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1B1Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1B1Protein Tat (Transactivating regulatory protein)
VIF_HV1B1Virion infectivity factor (Vif) (SOR protein)
VPR_HV1B1Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1B1Protein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BRU/LAI) (HIV-1)

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ENV_HV1BREnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1BRGag polyprotein (Pr55Gag)
NEF_HV1BRProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1BRGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1BRProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1BRProtein Tat (Transactivating regulatory protein)
VIF_HV1BRVirion infectivity factor (Vif) (SOR protein)
VPR_HV1BRProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1BRProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate JRCSF) (HIV-1)

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ENV_HV1JREnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1JRGag polyprotein (Pr55Gag)
NEF_HV1JRProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1JRGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1JRProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1JRProtein Tat (Transactivating regulatory protein)
VIF_HV1JRVirion infectivity factor (Vif) (SOR protein)
VPR_HV1JRProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1JRProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate MN) (HIV-1)

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ENV_HV1MNEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1MNGag polyprotein (Pr55Gag)
NEF_HV1MNProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1MNGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1MNProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1MNProtein Tat (Transactivating regulatory protein)
VIF_HV1MNVirion infectivity factor (Vif) (SOR protein)
VPR_HV1MNProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1MNProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate RF/HAT3) (HIV-1)

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ENV_HV1RHEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1RHGag polyprotein (Pr55Gag)
NEF_HV1RHProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1RHGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1RHProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1RHProtein Tat (Transactivating regulatory protein)
VIF_HV1RHVirion infectivity factor (Vif) (SOR protein)
VPR_HV1RHProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1RHProtein Vpu (U ORF protein)

9 entries

Human immunodeficiency virus type 1 group M subtype B (isolate YU-2) (HIV-1)

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ENV_HV1Y2Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1Y2Gag polyprotein (Pr55Gag)
NEF_HV1Y2Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1Y2Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1Y2Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1Y2Protein Tat (Transactivating regulatory protein)
VIF_HV1Y2Virion infectivity factor (Vif) (SOR protein)
VPR_HV1Y2Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1Y2Protein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype B (strain 89.6) (HIV-1)

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ENV_HV1B9Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1B9Gag polyprotein (Pr55Gag)
NEF_HV1B9Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1B9Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1B9Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1B9Protein Tat (Transactivating regulatory protein)
VIF_HV1B9Virion infectivity factor (Vif) (SOR protein)
VPR_HV1B9Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1B9Protein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype C (isolate 92BR025) (HIV-1)

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ENV_HV192Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV192Gag polyprotein (Pr55Gag)
NEF_HV192Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV192Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV192Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV192Protein Tat (Transactivating regulatory protein)
VIF_HV192Virion infectivity factor (Vif) (SOR protein)
VPR_HV192Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV192Protein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype C (isolate ETH2220) (HIV-1)

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ENV_HV1ETEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1ETGag polyprotein (Pr55Gag)
NEF_HV1ETProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1ETGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1ETProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1ETProtein Tat (Transactivating regulatory protein)
VIF_HV1ETVirion infectivity factor (Vif) (SOR protein)
VPR_HV1ETProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1ETProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype D (isolate ELI) (HIV-1)

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ENV_HV1ELEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1ELGag polyprotein (Pr55Gag)
NEF_HV1ELProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1ELGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1ELProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1ELProtein Tat (Transactivating regulatory protein)
VIF_HV1ELVirion infectivity factor (Vif) (SOR protein)
VPR_HV1ELProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1ELProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype F1 (isolate 93BR020) (HIV-1)

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ENV_HV193Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV193Gag polyprotein (Pr55Gag)
NEF_HV193Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV193Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV193Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV193Protein Tat (Transactivating regulatory protein)
VIF_HV193Virion infectivity factor (Vif) (SOR protein)
VPR_HV193Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV193Protein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype F1 (isolate VI850) (HIV-1)

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ENV_HV1VIEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1VIGag polyprotein (Pr55Gag)
NEF_HV1VIProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1VIGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1VIProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1VIProtein Tat (Transactivating regulatory protein)
VIF_HV1VIVirion infectivity factor (Vif) (SOR protein)
VPR_HV1VIProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1VIProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group M subtype H (isolate 90CF056) (HIV-1)

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ENV_HV190Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV190Gag polyprotein (Pr55Gag)
NEF_HV190Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV190Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV190Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV190Protein Tat (Transactivating regulatory protein)
VIF_HV190Virion infectivity factor (Vif) (SOR protein)
VPR_HV190Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV190Protein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group N (isolate YBF106) (HIV-1)

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ENV_HV1YBEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1YBGag polyprotein (Pr55Gag)
NEF_HV1YBProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1YBGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1YBProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1YBProtein Tat (Transactivating regulatory protein)
VIF_HV1YBVirion infectivity factor (Vif) (SOR protein)
VPR_HV1YBProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1YBProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group N (isolate YBF30) (HIV-1)

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ENV_HV1YFEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1YFGag polyprotein (Pr55Gag)
NEF_HV1YFProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1YFGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1YFProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1YFProtein Tat (Transactivating regulatory protein)
VIF_HV1YFVirion infectivity factor (Vif) (SOR protein)
VPR_HV1YFProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1YFProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group O (isolate ANT70) (HIV-1)

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ENV_HV1ANEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1ANGag polyprotein (Pr55Gag)
NEF_HV1ANProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1ANGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1ANProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1ANProtein Tat (Transactivating regulatory protein)
VIF_HV1ANVirion infectivity factor (Vif) (SOR protein)
VPR_HV1ANProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1ANProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 1 group O (isolate MVP5180) (HIV-1)

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ENV_HV1MVEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1MVGag polyprotein (Pr55Gag)
NEF_HV1MVProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1MVGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1MVProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1MVProtein Tat (Transactivating regulatory protein)
VIF_HV1MVVirion infectivity factor (Vif) (SOR protein)
VPR_HV1MVProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1MVProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate CAM2) (HIV-2)

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ENV_HV2CAEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV2CAGag polyprotein (Pr55Gag)
NEF_HV2CAProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2CAGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2CAProtein Rev (Regulator of expression of viral proteins)
TAT_HV2CAProtein Tat (Transactivating regulatory protein)
VIF_HV2CAVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2CAProtein Vpr (R ORF protein) (Viral protein R)
VPX_HV2CAProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate D194) (HIV-2)

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ENV_HV2D1Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV2D1Gag polyprotein (Pr55Gag)
NEF_HV2D1Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2D1Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2D1Protein Rev (Regulator of expression of viral proteins)
TAT_HV2D1Protein Tat (Transactivating regulatory protein)
VIF_HV2D1Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2D1Protein Vpr (R ORF protein) (Viral protein R)
VPX_HV2D1Protein Vpx (Viral protein X) (X ORF protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate Ghana-1) (HIV-2)

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ENV_HV2G1Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV2G1Gag polyprotein (Pr55Gag)
NEF_HV2G1Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2G1Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2G1Protein Rev (Regulator of expression of viral proteins)
TAT_HV2G1Protein Tat (Transactivating regulatory protein)
VIF_HV2G1Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2G1Protein Vpr (R ORF protein) (Viral protein R)
VPX_HV2G1Protein Vpx (Viral protein X) (X ORF protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate KR) (HIV-2)

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ENV_HV2KREnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV2KRGag polyprotein (Pr55Gag)
NEF_HV2KRProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2KRGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2KRProtein Rev (Regulator of expression of viral proteins)
TAT_HV2KRProtein Tat (Transactivating regulatory protein)
VIF_HV2KRVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2KRProtein Vpr (R ORF protein) (Viral protein R)
VPX_HV2KRProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate NIH-Z) (HIV-2)

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ENV_HV2NZEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV2NZGag polyprotein (Pr55Gag)
NEF_HV2NZProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2NZGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2NZProtein Rev (Regulator of expression of viral proteins)
TAT_HV2NZProtein Tat (Transactivating regulatory protein)
VIF_HV2NZVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2NZProtein Vpr (R ORF protein) (Viral protein R)
VPX_HV2NZProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate ROD) (HIV-2)

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ENV_HV2ROEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV2ROGag polyprotein (Pr55Gag)
NEF_HV2ROProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2ROGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2ROProtein Rev (Regulator of expression of viral proteins)
TAT_HV2ROProtein Tat (Transactivating regulatory protein)
VIF_HV2ROVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2ROProtein Vpr (R ORF protein) (Viral protein R)
VPX_HV2ROProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate SBLISY) (HIV-2)

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ENV_HV2SBEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV2SBGag polyprotein (Pr55Gag)
NEF_HV2SBProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2SBGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2SBProtein Rev (Regulator of expression of viral proteins)
TAT_HV2SBProtein Tat (Transactivating regulatory protein)
VIF_HV2SBVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2SBProtein Vpr (R ORF protein) (Viral protein R)
VPX_HV2SBProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Human immunodeficiency virus type 2 subtype A (isolate ST) (HIV-2)

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ENV_HV2STEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV2STGag polyprotein (Pr55Gag)
NEF_HV2STProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2STGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2STProtein Rev (Regulator of expression of viral proteins)
TAT_HV2STProtein Tat (Transactivating regulatory protein)
VIF_HV2STVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2STProtein Vpr (R ORF protein) (Viral protein R)
VPX_HV2STProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Human immunodeficiency virus type 2 subtype B (isolate EHO) (HIV-2)

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ENV_HV2EHEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV2EHGag polyprotein (Pr55Gag)
NEF_HV2EHProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2EHGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2EHProtein Rev (Regulator of expression of viral proteins)
TAT_HV2EHProtein Tat (Transactivating regulatory protein)
VIF_HV2EHVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2EHProtein Vpr (Viral protein R)
VPX_HV2EHProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Human immunodeficiency virus type 2 subtype B (isolate UC1) (HIV-2)

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ENV_HV2UCEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV2UCGag polyprotein (Pr55Gag)
NEF_HV2UCProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2UCGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2UCProtein Rev (Regulator of expression of viral proteins)
TAT_HV2UCProtein Tat (Transactivating regulatory protein)
VIF_HV2UCVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2UCProtein Vpr (R ORF protein) (Viral protein R)
VPX_HV2UCProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Simian immunodeficiency virus (isolate CPZ GAB1) (SIV-cpz) (Chimpanzee immunodeficiency virus)

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ENV_SIVCZEnvelope glycoprotein gp160 (Env polyprotein)
GAG_SIVCZGag polyprotein (Pr55Gag)
NEF_SIVCZProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVCZGag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVCZProtein Rev (Regulator of expression of viral proteins)
TAT_SIVCZProtein Tat (Transactivating regulatory protein)
VIF_SIVCZVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_SIVCZProtein Vpr (R ORF protein) (Viral protein R)
VPU_SIVCZProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Simian immunodeficiency virus (isolate EK505) (SIV-cpz) (Chimpanzee immunodeficiency virus)

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ENV_SIVEKEnvelope glycoprotein gp160 (Env polyprotein)
GAG_SIVEKGag polyprotein (Pr55Gag)
NEF_SIVEKProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVEKGag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVEKProtein Rev (Regulator of expression of viral proteins)
TAT_SIVEKProtein Tat (Transactivating regulatory protein)
VIF_SIVEKVirion infectivity factor (Vif)
VPR_SIVEKProtein Vpr (R ORF protein) (Viral protein R)
VPU_SIVEKProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Simian immunodeficiency virus (isolate F236/smH4) (SIV-sm) (Simian immunodeficiency virus sooty mangabey monkey)

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ENV_SIVS4Envelope glycoprotein gp160 (Env polyprotein)
GAG_SIVS4Gag polyprotein (Pr55Gag)
NEF_SIVS4Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVS4Gag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVS4Protein Rev (Regulator of expression of viral proteins)
TAT_SIVS4Protein Tat (Transactivating regulatory protein)
VIF_SIVS4Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_SIVS4Protein Vpr (R ORF protein) (Viral protein R)
VPX_SIVS4Protein Vpx (Viral protein X) (X ORF protein)

9 entries

Simian immunodeficiency virus (isolate K6W) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

Select_all Deselect_all  
ENV_SIVMKEnvelope glycoprotein gp160 (Env polyprotein)
GAG_SIVMKGag polyprotein (Pr55Gag)
NEF_SIVMKProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVMKGag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVMKProtein Rev (Regulator of expression of viral proteins)
TAT_SIVMKProtein Tat (Transactivating regulatory protein)
VIF_SIVMKVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_SIVMKProtein Vpr (R ORF protein) (Viral protein R)
VPX_SIVMKProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Simian immunodeficiency virus (isolate MB66) (SIV-cpz) (Chimpanzee immunodeficiency virus)

Select_all Deselect_all  
ENV_SIVMBEnvelope glycoprotein gp160 (Env polyprotein)
GAG_SIVMBGag polyprotein (Pr55Gag)
NEF_SIVMBProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVMBGag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVMBProtein Rev (Regulator of expression of viral proteins)
TAT_SIVMBProtein Tat (Transactivating regulatory protein)
VIF_SIVMBVirion infectivity factor (Vif)
VPR_SIVMBProtein Vpr (R ORF protein) (Viral protein R)
VPU_SIVMBProtein Vpu (U ORF protein) (Viral protein U)

9 entries

Simian immunodeficiency virus (isolate Mm142-83) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

Select_all Deselect_all  
ENV_SIVM1Envelope glycoprotein gp160 (Env polyprotein)
GAG_SIVM1Gag polyprotein (Pr55Gag)
NEF_SIVM1Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVM1Gag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVM1Protein Rev (Regulator of expression of viral proteins)
TAT_SIVM1Protein Tat (Transactivating regulatory protein)
VIF_SIVM1Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_SIVM1Protein Vpr (R ORF protein) (Viral protein R)
VPX_SIVM1Protein Vpx (Viral protein X) (X ORF protein)

9 entries

Simian immunodeficiency virus (isolate PBj14/BCL-3) (SIV-sm) (Simian immunodeficiency virus sooty mangabey monkey)

Select_all Deselect_all  
ENV_SIVSPEnvelope glycoprotein gp160 (Env polyprotein)
GAG_SIVSPGag polyprotein (Pr55Gag)
NEF_SIVSPProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVSPGag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVSPProtein Rev (Regulator of expression of viral proteins)
TAT_SIVSPProtein Tat (Transactivating regulatory protein)
VIF_SIVSPVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_SIVSPProtein Vpr (R ORF protein) (Viral protein R)
VPX_SIVSPProtein Vpx (Viral protein X) (X ORF protein)

9 entries

Simian immunodeficiency virus (isolate TAN1) (SIV-cpz) (Chimpanzee immunodeficiency virus)

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ENV_SIVTNEnvelope glycoprotein gp160 (Env polyprotein)
GAG_SIVTNGag polyprotein (Pr55Gag)
NEF_SIVTNProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVTNGag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVTNProtein Rev (Regulator of expression of viral proteins)
TAT_SIVTNProtein Tat (Transactivating regulatory protein)
VIF_SIVTNVirion infectivity factor (Vif)
VPR_SIVTNProtein Vpr (R ORF protein) (Viral protein R)
VPU_SIVTNProtein Vpu (U ORF protein) (Viral protein U)

8 entries

Bovine immunodeficiency virus (strain R29) (BIV) (Bovine immunodeficiency-like virus)

Select_all Deselect_all  
ENV_BIV29Envelope glycoprotein (Env polyprotein)
GAG_BIV29Gag polyprotein (Pr53Gag)
POL_BIV29Gag-Pol polyprotein (Pr170Gag-Pol)
REV_BIV29Protein Rev
TAT_BIV29Protein Tat (S ORF) (Transactivating regulatory protein) (bTat)
VIF_BIV29Virion infectivity factor (Q protein)
VPW_BIV29Protein Vpw
VPY_BIV29Protein Vpy

8 entries

Human immunodeficiency virus type 1 group M subtype B (isolate OYI) (HIV-1)

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ENV_HV1OYEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1OYGag polyprotein (Pr55Gag)
NEF_HV1OYProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1OYGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1OYProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1OYProtein Tat (Transactivating regulatory protein)
VIF_HV1OYVirion infectivity factor (Vif) (SOR protein)
VPR_HV1OYProtein Vpr (R ORF protein) (Viral protein R)

8 entries

Human immunodeficiency virus type 1 group M subtype D (isolate NDK) (HIV-1)

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ENV_HV1NDEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1NDGag polyprotein (Pr55Gag)
NEF_HV1NDProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1NDGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1NDProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1NDProtein Tat (Transactivating regulatory protein)
VIF_HV1NDVirion infectivity factor (Vif) (SOR protein)
VPU_HV1NDProtein Vpu (U ORF protein) (Viral protein U)

8 entries

Human immunodeficiency virus type 1 group M subtype D (isolate Z2/CDC-Z34) (HIV-1)

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ENV_HV1Z2Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1Z2Gag polyprotein (Pr55Gag)
POL_HV1Z2Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1Z2Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1Z2Protein Tat (Transactivating regulatory protein)
VIF_HV1Z2Virion infectivity factor (Vif) (SOR protein)
VPR_HV1Z2Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1Z2Protein Vpu (U ORF protein) (Viral protein U)

8 entries

Human immunodeficiency virus type 1 group M subtype F2 (isolate MP255) (HIV-1)

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ENV_HV1MPEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1MPGag polyprotein (Pr55Gag)
NEF_HV1MPProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1MPGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1MPProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1MPProtein Tat (Transactivating regulatory protein)
VIF_HV1MPVirion infectivity factor (Vif) (SOR protein)
VPR_HV1MPProtein Vpr (R ORF protein) (Viral protein R)

8 entries

Human immunodeficiency virus type 1 group M subtype F2 (isolate MP257) (HIV-1)

Select_all Deselect_all  
ENV_HV1M2Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1M2Gag polyprotein (Pr55Gag)
NEF_HV1M2Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1M2Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1M2Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1M2Protein Tat (Transactivating regulatory protein)
VIF_HV1M2Virion infectivity factor (Vif) (SOR protein)
VPR_HV1M2Protein Vpr (R ORF protein) (Viral protein R)

8 entries

Human immunodeficiency virus type 1 group M subtype G (isolate 92NG083) (HIV-1)

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ENV_HV19NEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV19NGag polyprotein (Pr55Gag)
NEF_HV19NProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV19NGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV19NProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV19NProtein Tat (Transactivating regulatory protein)
VIF_HV19NVirion infectivity factor (Vif) (SOR protein)
VPR_HV19NProtein Vpr (R ORF protein) (Viral protein R)

8 entries

Human immunodeficiency virus type 1 group M subtype H (isolate VI991) (HIV-1)

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ENV_HV1V9Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1V9Gag polyprotein (Pr55Gag)
NEF_HV1V9Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1V9Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1V9Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1V9Protein Tat (Transactivating regulatory protein)
VIF_HV1V9Virion infectivity factor (Vif) (SOR protein)
VPR_HV1V9Protein Vpr (R ORF protein) (Viral protein R)

8 entries

Human immunodeficiency virus type 1 group M subtype J (isolate SE9173) (HIV-1)

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ENV_HV1S9Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1S9Gag polyprotein (Pr55Gag)
NEF_HV1S9Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1S9Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1S9Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1S9Protein Tat (Transactivating regulatory protein)
VIF_HV1S9Virion infectivity factor (Vif) (SOR protein)
VPR_HV1S9Protein Vpr (R ORF protein) (Viral protein R)

8 entries

Human immunodeficiency virus type 1 group M subtype J (isolate SE9280) (HIV-1)

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ENV_HV1S2Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1S2Gag polyprotein (Pr55Gag)
NEF_HV1S2Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1S2Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1S2Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1S2Protein Tat (Transactivating regulatory protein)
VIF_HV1S2Virion infectivity factor (Vif) (SOR protein)
VPR_HV1S2Protein Vpr (R ORF protein) (Viral protein R)

8 entries

Human immunodeficiency virus type 1 group M subtype K (isolate 96CM-MP535) (HIV-1)

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ENV_HV196Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV196Gag polyprotein (Pr55Gag)
NEF_HV196Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV196Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV196Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV196Protein Tat (Transactivating regulatory protein)
VIF_HV196Virion infectivity factor (Vif) (SOR protein)
VPR_HV196Protein Vpr (R ORF protein) (Viral protein R)

8 entries

Human immunodeficiency virus type 1 group M subtype K (isolate 97ZR-EQTB11) (HIV-1)

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ENV_HV197Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV197Gag polyprotein (Pr55Gag)
NEF_HV197Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV197Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV197Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV197Protein Tat (Transactivating regulatory protein)
VIF_HV197Virion infectivity factor (Vif) (SOR protein)
VPR_HV197Protein Vpr (R ORF protein) (Viral protein R)

8 entries

Human immunodeficiency virus type 2 subtype B (isolate D205) (HIV-2)

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ENV_HV2D2Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV2D2Gag polyprotein (Pr55Gag)
NEF_HV2D2Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV2D2Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV2D2Protein Rev (Regulator of expression of viral proteins)
VIF_HV2D2Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_HV2D2Protein Vpr (R ORF protein) (Viral protein R)
VPX_HV2D2Protein Vpx (Viral protein X) (X ORF protein)

8 entries

Simian immunodeficiency virus (isolate GB1) (SIV-mnd) (Simian immunodeficiency virus mandrill)

Select_all Deselect_all  
ENV_SIVGBEnvelope glycoprotein gp160 (Env polyprotein)
GAG_SIVGBGag polyprotein (Pr55Gag)
NEF_SIVGBProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVGBGag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVGBProtein Rev (Regulator of expression of viral proteins)
TAT_SIVGBProtein Tat (Transactivating regulatory protein)
VIF_SIVGBVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPR_SIVGBProtein Vpr (R ORF protein) (Viral protein R)

8 entries

Simian immunodeficiency virus agm.grivet (isolate AGM gr-1) (SIV-agm.gri) (Simian immunodeficiency virus African green monkey grivet)

Select_all Deselect_all  
ENV_SIVG1Envelope glycoprotein gp160 (Env polyprotein)
GAG_SIVG1Gag polyprotein (Pr55Gag)
NEF_SIVG1Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVG1Gag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVG1Protein Rev (Regulator of expression of viral proteins)
TAT_SIVG1Protein Tat (Transactivating regulatory protein)
VIF_SIVG1Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_SIVG1Protein Vpx (Viral protein X) (X ORF protein)

8 entries

Simian immunodeficiency virus agm.vervet (isolate AGM TYO-1) (SIV-agm.ver) (Simian immunodeficiency virus African green monkey vervet)

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ENV_SIVVTEnvelope glycoprotein gp160 (Env polyprotein)
GAG_SIVVTGag polyprotein (Pr55Gag)
NEF_SIVVTProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVVTGag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVVTProtein Rev (Regulator of expression of viral proteins)
TAT_SIVVTProtein Tat (Transactivating regulatory protein)
VIF_SIVVTVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_SIVVTProtein Vpx (Viral protein X) (X ORF protein)

8 entries

Simian immunodeficiency virus agm.vervet (isolate AGM155) (SIV-agm.ver) (Simian immunodeficiency virus African green monkey vervet)

Select_all Deselect_all  
ENV_SIVV1Envelope glycoprotein gp160 (Env polyprotein)
GAG_SIVV1Gag polyprotein (Pr55Gag)
NEF_SIVV1Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVV1Gag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVV1Protein Rev (Regulator of expression of viral proteins)
TAT_SIVV1Protein Tat (Transactivating regulatory protein)
VIF_SIVV1Virion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_SIVV1Protein Vpx (Viral protein X) (X ORF protein)

8 entries

Simian immunodeficiency virus agm.vervet (isolate AGM3) (SIV-agm.ver) (Simian immunodeficiency virus African green monkey vervet)

Select_all Deselect_all  
ENV_SIVVGEnvelope glycoprotein gp160 (Env polyprotein)
GAG_SIVVGGag polyprotein (Pr55Gag)
NEF_SIVVGProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_SIVVGGag-Pol polyprotein (Pr160Gag-Pol)
REV_SIVVGProtein Rev (Regulator of expression of viral proteins)
TAT_SIVVGProtein Tat (Transactivating regulatory protein)
VIF_SIVVGVirion infectivity factor (Vif) (Q protein) (SOR protein)
VPX_SIVVGProtein Vpx (Viral protein X) (X ORF protein)

7 entries

Feline immunodeficiency virus (strain San Diego) (FIV)

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ENV_FIVSDEnvelope glycoprotein gp150 (Env polyprotein)
GAG_FIVSDGag polyprotein
POL_FIVSDPol polyprotein
REV_FIVSDProbable protein Rev (3'ORF) (ART/TRS) (Anti-repression transactivator) (ORF4) ...
VIF_FIVSDVirion infectivity factor
VPRL_FIVSDProbable Vpr-like protein (ORF2) (OrfA) (Protein Tat)
YOR3_FIVSDUncharacterized protein ORF3 (ORFD)

7 entries

Human immunodeficiency virus type 1 group M subtype B (isolate LW123) (HIV-1)

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ENV_HV1LWEnvelope glycoprotein gp160 (Env polyprotein)
GAG_HV1LWGag polyprotein (Pr55Gag)
NEF_HV1LWProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1LWGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1LWProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
VIF_HV1LWTruncated virion infectivity factor (Vif) (SOR protein)
VPU_HV1LWProtein Vpu (U ORF protein) (Viral protein U)

7 entries

Human immunodeficiency virus type 1 group M subtype G (isolate SE6165) (HIV-1)

Select_all Deselect_all  
GAG_HV1SEGag polyprotein (Pr55Gag)
NEF_HV1SEProtein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1SEGag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1SEProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1SEProtein Tat (Transactivating regulatory protein)
VIF_HV1SEVirion infectivity factor (Vif) (SOR protein)
VPR_HV1SEProtein Vpr (R ORF protein) (Viral protein R)

7 entries

Ovine maedi visna related virus (strain South Africa) (SA-OMVV) (Ovine lentivirus)

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ENV_OMVVSEnvelope glycoprotein gp160 (Env polyprotein)
GAG_OMVVSGag polyprotein
POL_OMVVSPol polyprotein
REV_OMVVSProtein Rev
VIF_OMVVSVirion infectivity factor (Q protein)
VPRL_OMVVSProbable Vpr-like protein (Protein S) (Protein Tat)
VPW_OMVVSPutative uncharacterized protein W

6 entries

Caprine arthritis encephalitis virus (strain Cork) (CAEV-Co)

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ENV_CAEVCEnvelope glycoprotein (Env polyprotein)
GAG_CAEVCGag polyprotein
POL_CAEVCPol polyprotein
REV_CAEVCProtein Rev (Rev-C)
VIF_CAEVCVirion infectivity factor (Q protein) (SOR protein)
VPRL_CAEVCProbable Vpr-like protein (Protein S) (Protein Tat)

6 entries

Feline immunodeficiency virus (isolate Petaluma) (FIV)

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ENV_FIVPEEnvelope glycoprotein gp150 (Env polyprotein)
GAG_FIVPEGag polyprotein
POL_FIVPEPol polyprotein
REV_FIVPEProbable protein Rev (3'ORF) (ART/TRS) (Anti-repression transactivator) (ORF4) ...
VIF_FIVPEVirion infectivity factor
VPRL_FIVPEProbable Vpr-like protein (ORF2) (OrfA) (Protein Tat)

6 entries

Human immunodeficiency virus type 1 group M subtype A (isolate U455) (HIV-1)

Select_all Deselect_all  
GAG_HV1U4Gag polyprotein (Pr55Gag)
NEF_HV1U4Protein Nef (3'ORF) (Negative factor) (F-protein)
POL_HV1U4Gag-Pol polyprotein (Pr160Gag-Pol)
REV_HV1U4Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1U4Protein Tat (Transactivating regulatory protein)
VIF_HV1U4Virion infectivity factor (Vif) (SOR protein)

6 entries

Human immunodeficiency virus type 1 group M subtype B (isolate HXB3) (HIV-1)

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ENV_HV1H3Envelope glycoprotein gp160 (Env polyprotein)
NEF_HV1H3Protein Nef (3'ORF) (Negative factor) (F-protein)
REV_HV1H3Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1H3Protein Tat (Transactivating regulatory protein)
VPR_HV1H3Protein Vpr (R ORF protein) (Viral protein R)
VPU_HV1H3Protein Vpu (U ORF protein) (Viral protein U)

6 entries

Human immunodeficiency virus type 1 group M subtype B (isolate SC) (HIV-1)

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ENV_HV1SCEnvelope glycoprotein gp160 (Env polyprotein)
NEF_HV1SCProtein Nef (3'ORF) (Negative factor) (F-protein)
REV_HV1SCProtein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1SCProtein Tat (Transactivating regulatory protein)
VPR_HV1SCProtein Vpr (R ORF protein) (Viral protein R)
VPU_HV1SCProtein Vpu (U ORF protein)

6 entries

Jembrana disease virus (JDV)

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ENV_JEMBREnvelope glycoprotein (Env polyprotein)
GAG_JEMBRGag polyprotein (Pr53Gag)
POL_JEMBRGag-Pol polyprotein (Pr170Gag-Pol)
REV_JEMBRProtein Rev
TAT_JEMBRProtein Tat (Transactivating regulatory protein) (jTat)
VIF_JEMBRVirion infectivity factor (Vif)

6 entries

Maedi visna virus (strain 1514) (MVV) (Visna lentivirus)

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ENV_VILVEnvelope glycoprotein gp160 (Env polyprotein)
GAG_VILVGag polyprotein
POL_VILVPol polyprotein
REV_VILVProtein Rev
VIF_VILVVirion infectivity factor (Q protein)
VPRL_VILVProbable Vpr-like protein (Protein S) (Protein Tat)

6 entries

Maedi visna virus (strain KV1772) (MVV) (Visna lentivirus)

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ENV_VILVKEnvelope glycoprotein gp160 (Env polyprotein)
GAG_VILVKGag polyprotein
POL_VILVKPol polyprotein
REV_VILVKProtein Rev
VIF_VILVKVirion infectivity factor (Q protein)
VPRL_VILVKProbable Vpr-like protein (Protein S) (Protein Tat)

6 entries

Simian immunodeficiency virus (isolate K78) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)

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ENV_SIVMLEnvelope glycoprotein gp160 (Env polyprotein)
NEF_SIVMLProtein Nef (3'ORF) (Negative factor) (F-protein)
REV_SIVMLProtein Rev (Regulator of expression of viral proteins)
TAT_SIVMLProtein Tat (Transactivating regulatory protein)
VPR_SIVMLProtein Vpr (R ORF protein) (Viral protein R)
VPX_SIVMLProtein Vpx (Viral protein X) (X ORF protein)

5 entries

Equine infectious anemia virus (isolate CL22) (EIAV)

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ENV_EIAVCEnvelope glycoprotein (Env polyprotein)
GAG_EIAVCGag polyprotein
POL_EIAVCPol polyprotein
REV_EIAVCProtein Rev (3'-ORF protein)
TAT_EIAVCProtein Tat (E-Tat) (Transactivating regulatory protein) (eTat)

5 entries

Equine infectious anemia virus (strain Wyoming) (EIAV)

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ENV_EIAVYEnvelope glycoprotein (Env polyprotein)
GAG_EIAVYGag polyprotein
POL_EIAVYPol polyprotein
REV_EIAVYProtein Rev (3'-ORF protein)
TAT_EIAVYProtein Tat (E-Tat) (Transactivating regulatory protein) (eTat)

5 entries

Human immunodeficiency virus type 1 group M subtype B (isolate CDC-451) (HIV-1)

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ENV_HV1C4Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1C4Gag polyprotein (Pr55Gag)
REV_HV1C4Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1C4Protein Tat (Transactivating regulatory protein)
VPU_HV1C4Protein Vpu (U ORF protein) (Viral protein U)

5 entries

Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1)

5 entries

Human immunodeficiency virus type 1 group M subtype B (isolate PCV12) (HIV-1)

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NEF_HV112Protein Nef (3'ORF) (Negative factor) (F-protein)
REV_HV112Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV112Protein Tat (Transactivating regulatory protein)
VIF_HV112Virion infectivity factor (Vif) (SOR protein)
VPR_HV112Protein Vpr (R ORF protein) (Viral protein R)

5 entries

Human immunodeficiency virus type 1 group M subtype B (isolate SF162) (HIV-1)

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ENV_HV1S1Envelope glycoprotein gp160 (Env polyprotein)
NEF_HV1S1Protein Nef (3'ORF) (Negative factor) (F-protein)
REV_HV1S1Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1S1Protein Tat (Transactivating regulatory protein)
VPU_HV1S1Protein Vpu (U ORF protein) (Viral protein U)

5 entries

Human immunodeficiency virus type 1 group M subtype B (isolate SF33) (HIV-1)

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ENV_HV1S3Envelope glycoprotein gp160 (Env polyprotein)
NEF_HV1S3Protein Nef (3'ORF) (Negative factor) (F-protein)
REV_HV1S3Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1S3Protein Tat (Transactivating regulatory protein)
VPR_HV1S3Protein Vpr (R ORF protein) (Viral protein R)

5 entries

Human immunodeficiency virus type 1 group M subtype D (isolate Z6) (HIV-1)

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ENV_HV1Z6Envelope glycoprotein gp160 (Env polyprotein)
NEF_HV1Z6Protein Nef (3'ORF) (Negative factor) (F-protein)
REV_HV1Z6Protein Rev (ART/TRS) (Anti-repression transactivator) (Regulator of expression ...
TAT_HV1Z6Protein Tat (Transactivating regulatory protein)
VIF_HV1Z6Virion infectivity factor (Vif) (SOR protein)

5 entries

Maedi visna virus (strain 1514 / clone LV1-1KS1) (MVV) (Visna lentivirus)

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ENV_VILV1Envelope glycoprotein gp160 (Env polyprotein)
GAG_VILV1Gag polyprotein
POL_VILV1Pol polyprotein
VIF_VILV1Virion infectivity factor (Q protein)
VPRL_VILV1Probable Vpr-like protein (Protein S) (Protein Tat)

5 entries

Maedi visna virus (strain 1514 / clone LV1-1KS2) (MVV) (Visna lentivirus)

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ENV_VILV2Envelope glycoprotein gp160 (Env polyprotein)
GAG_VILV2Gag polyprotein
POL_VILV2Pol polyprotein
VIF_VILV2Virion infectivity factor (Q protein)
VPRL_VILV2Probable Vpr-like protein (Protein S) (Protein Tat)

4 entries

Equine infectious anemia virus (isolate 1369) (EIAV)

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ENV_EIAV9Envelope glycoprotein (Env polyprotein)
GAG_EIAV9Gag polyprotein
POL_EIAV9Pol polyprotein
REV_EIAV9Protein Rev (3'-ORF protein)

4 entries

Feline immunodeficiency virus (isolate TM2) (FIV)

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ENV_FIVT2Envelope glycoprotein gp150 (Env polyprotein)
GAG_FIVT2Gag polyprotein
POL_FIVT2Pol polyprotein
VIF_FIVT2Virion infectivity factor

4 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BH5) (HIV-1)

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GAG_HV1B5Gag polyprotein (Pr55Gag)
POL_HV1B5Gag-Pol polyprotein (Pr160Gag-Pol)
VIF_HV1B5Virion infectivity factor (Vif) (SOR protein)
VPR_HV1B5Protein Vpr (R ORF protein) (Viral protein R)

3 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BH8) (HIV-1)

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ENV_HV1B8Envelope glycoprotein gp160 (Env polyprotein)
NEF_HV1B8Protein Nef (3'ORF) (Negative factor) (F-protein)
VPU_HV1B8Protein Vpu (U ORF protein) (Viral protein U)

3 entries

Human immunodeficiency virus type 1 group M subtype B (isolate BRVA) (HIV-1)

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ENV_HV1BNEnvelope glycoprotein gp160 (Env polyprotein)
NEF_HV1BNProtein Nef (3'ORF) (Negative factor) (F-protein)
VPU_HV1BNProtein Vpu (U ORF protein) (Viral protein U)

3 entries

Human immunodeficiency virus type 1 group M subtype B (isolate JH32) (HIV-1)

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ENV_HV1J3Envelope glycoprotein gp160 (Env polyprotein)
GAG_HV1J3Gag polyprotein (Pr55Gag)
VPU_HV1J3Protein Vpu (U ORF protein) (Viral protein U)

2 entries

Caprine arthritis encephalitis virus (CAEV)

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REV_CAEVProtein Rev (Rev-C)
VPU_CAEVProtein Vpu (ORF-X protein) (Protein UPX)

2 entries

Caprine arthritis encephalitis virus (strain 63) (CAEV-63)

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ENV_CAEVGEnvelope glycoprotein (Env polyprotein)
VPRL_CAEVGProbable Vpr-like protein (Protein S) (Protein Tat)

2 entries

Feline immunodeficiency virus (isolate Wo) (FIV)

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ENV_FIVWOEnvelope glycoprotein gp150 (Env polyprotein)
GAG_FIVWOGag polyprotein

2 entries

Human immunodeficiency virus type 1 group M subtype A (isolate Z321) (HIV-1)

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ENV_HV1ZHEnvelope glycoprotein gp160 (Env polyprotein)
NEF_HV1ZHProtein Nef (3'ORF) (Negative factor) (F-protein)

2 entries

Human immunodeficiency virus type 1 group M subtype U (isolate Z3) (HIV-1)

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ENV_HV1Z3Truncated surface protein (SU) (Glycoprotein 120) (gp120)
VPU_HV1Z3Protein Vpu (U ORF protein) (Viral protein U)

2 entries

Simian immunodeficiency virus (isolate African mandrill) (SIV-mnd)

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REV_SIVAMProtein Rev (Regulator of expression of viral proteins)
TAT_SIVAMProtein Tat (Transactivating regulatory protein)

1 entry

Equine infectious anemia virus (isolate P3.2-1) (EIAV)


ENV_EIAV1Envelope glycoprotein (Env polyprotein)

1 entry

Equine infectious anemia virus (isolate P3.2-2) (EIAV)


ENV_EIAV2Envelope glycoprotein (Env polyprotein)

1 entry

Equine infectious anemia virus (isolate P3.2-3) (EIAV)


ENV_EIAV3Envelope glycoprotein (Env polyprotein)

1 entry

Equine infectious anemia virus (isolate P3.2-5) (EIAV)


ENV_EIAV5Envelope glycoprotein (Env polyprotein)

1 entry

Equine infectious anemia virus (strain WSU5) (EIAV)


ENV_EIAVWEnvelope glycoprotein (Env polyprotein)

1 entry

Feline immunodeficiency virus (strain UK2) (FIV)


ENV_FIVU2Envelope glycoprotein gp150 (Env polyprotein)

1 entry

Feline immunodeficiency virus (strain UK8) (FIV)


ENV_FIVU8Envelope glycoprotein gp150 (Env polyprotein)

1 entry

Feline immunodeficiency virus (strain UT-113) (FIV)


ENV_FIVU1Envelope glycoprotein gp150 (Env polyprotein)

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate KB-1/ETR) (HIV-1)


ENV_HV1KBEnvelope glycoprotein gp160 (Env polyprotein)

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate MFA) (HIV-1)


ENV_HV1MFEnvelope glycoprotein gp160 (Env polyprotein)

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate N1T-A) (HIV-1)


VIF_HV1NAVirion infectivity factor (Vif) (SOR protein)

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate WMJ1) (HIV-1)


ENV_HV1W1Envelope glycoprotein gp160 (Env polyprotein)

1 entry

Human immunodeficiency virus type 1 group M subtype B (isolate WMJ22) (HIV-1)


ENV_HV1W2Envelope glycoprotein gp160 (Env polyprotein)

1 entry

Human immunodeficiency virus type 1 group M subtype D (isolate Z84) (HIV-1)


ENV_HV1Z8Envelope glycoprotein gp160 (Env polyprotein)

1 entry

Human immunodeficiency virus type 2 subtype A (isolate ST/24.1C#2) (HIV-2)


ENV_HV2S2Envelope glycoprotein gp160 (Env polyprotein)

1 entry

Simian immunodeficiency virus (isolate 1A11) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)


NEF_SIVMAProtein Nef (3'ORF) (Negative factor) (F-protein)

1 entry

Simian immunodeficiency virus (isolate Mm251) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)


ENV_SIVM2Envelope glycoprotein gp160 (Env polyprotein)

1 entry

Simian immunodeficiency virus (isolate STM) (SIV-mac) (Simian immunodeficiency virus rhesus monkey)


GAG_SIVMSGag polyprotein (Pr55Gag)

1 entry

Simian immunodeficiency virus AGM.tantalus (SIV-agm.tan) (Simian immunodeficiency virus African green monkey tantalus)


VIF_SIVTAVirion infectivity factor (Vif) (Q protein) (SOR protein)