Picovirinae

VIRION

Non-enveloped, head-tail structure. Head is about 54 nm in diameter. The tail is non-contractile and has a collar with 12 appendages. The capsid is icosahedral with a T=3 symmetry.

GENOME

Linear, dsDNA genome of about 16 to 20 kb encoding between 20 and 30 genes.

GENE EXPRESSION

REPLICATION

CYTOPLASMIC

  1. Adsorption: the phage attaches to target cell through its tail fibers.
  2. Injection: viral DNA is injected in host cell periplasm
  3. Transcription and traduction of early genes
  4. Replication of genomic DNA
  5. Transcription and traduction of late genes
  6. Assembly of new virions in host cell cytoplasm
  7. Mature virions are released from the cell by lysis
DB LINKS Nucleotide DB: NCBI
Protein DB: UniProtKB
TAXONOMY Group I: dsDNA viruses
Order: Caudovirales
Family: Podoviridae
Subfamily: Picovirinae
Genus: Phi29likevirus
Ahjdlikevirus
SPECIES
Type: Bacillus phage phi29 (phi29)
Staphylococcus phage 44AHJD
Main: Staphylococcus aureus phage P68
Staphylococcus phage 66
Staphylococcus phage SAP-2
Streptococcus phage C1
REFERENCE STRAINS Bacillus phage phi29
Sequence | Genome | Proteome Staphylococcus phage 44AHJD
Sequence | Genome | Proteome

Host

NATURAL HOSTS Bacteria

Epidemiology

GEOGRAPHY Worldwide
TRANSMISSION Passive diffusion through medium
ANTIVIRAL DRUGS

Matching UniProtKB/Swiss-Prot entries

85 entries grouped by strain

All proteins are shown (view only 49 complete proteome entries)

26 entries

Bacillus phage PZA (Bacteriophage PZA)

Select_all Deselect_all  
DPOL_BPPZADNA polymerase (EC 2.7.7.7) (Early protein GP2)
HEAD_BPPZAMajor head protein (Late protein Gp8)
LYS_BPPZALysozyme (EC 3.2.1.17) (Endolysin) (Late protein gp15) (Lysis protein) ...
SSB_BPPZASingle-strand-binding protein (SSB) (Early protein GP5)
TERM_BPPZADNA terminal protein (Protein GP3)
VG10_BPPZAUpper collar protein (Connector protein) (Late protein GP10)
VG11_BPPZALower collar protein (Late protein GP11)
VG12_BPPZAPre-neck appendage protein (Late protein GP12)
VG13_BPPZAMorphogenesis protein 1 (Late protein GP13)
VG14_BPPZALysis protein (Late protein GP14)
VG165_BPPZAEarly protein GP16.5
VG166_BPPZAEarly protein GP16.6
VG167_BPPZAEarly protein GP16.7
VG168_BPPZAEarly protein GP16.8
VG169_BPPZAEarly protein GP16.9
VG16_BPPZAEncapsidation protein (Late protein GP16)
VG17_BPPZAEarly protein GP17
VG1A_BPPZAEarly protein GP1A
VG1B_BPPZAEarly protein GP1B
VG1C_BPPZAEarly protein GP1C
VG4_BPPZALate genes activator (Early protein GP4)
VG5B_BPPZAEarly protein GP5B
VG6_BPPZAEarly protein GP6
VG7_BPPZAHead morphogenesis protein (Late protein GP7)
VG85_BPPZAHead fiber protein (Late protein GP8.5)
VG9_BPPZATail protein (Late protein GP9)

24 entries

Bacillus phage phi29 (Bacteriophage phi-29)

Select_all Deselect_all  
DPOL_BPPH2DNA polymerase (EC 2.7.7.7) (Early protein GP2)

pdb 1XHX  1XHZ  1XI1  2EX3  2PY5  2PYJ  2PYL  2PZS 

HEAD_BPPH2Major head protein (Late protein Gp8)
LYS_BPPH2Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Morphogenesis protein 2) ...
SSB_BPPH2Single-strand-binding protein (SSB) (Early protein GP5)
TERM_BPPH2DNA terminal protein (Protein Gp3)

pdb 2EX3 

VG10_BPPH2Upper collar protein (Connector protein) (Late protein GP10)

pdb 1FOU  1H5W  1IJG  1JNB  1L4P  1VRI  1VRJ  1YWE 

VG11_BPPH2Lower collar protein (Late protein GP11)
VG12_BPPH2Pre-neck appendage protein (Late protein GP12)

pdb 3GQ7  3GQ8  3GQ9  3GQA  3GQH  3GQK  3SUC 

VG13_BPPH2Morphogenesis protein 1 (Late protein GP13)

pdb 3CSQ  3CSR  3CSZ  3CT0  3CT1  3CT5 

VG14_BPPH2Lysis protein (Late protein GP14)
VG165_BPPH2Early protein GP16.5
VG166_BPPH2Early protein GP16.6
VG167_BPPH2Early protein GP16.7

pdb 1ZAE  2BNK  2C5R 

VG168_BPPH2Early protein GP16.8
VG169_BPPH2Early protein GP16.9
VG16_BPPH2Encapsidation protein (Late protein GP16)
VG17_BPPH2Early protein GP17
VG1_BPPH2Early protein GP1
VG4_BPPH2Late genes activator (Early protein GP4)

pdb 2FIO  2FIP 

VG5B_BPPH2Early protein GP5B
VG6_BPPH2Early protein GP6
VG7_BPPH2Head morphogenesis protein (Late protein GP7)

pdb 1NO4  1NOH  3MTU  3OA7 

VG85_BPPH2Head fiber protein (Late protein GP8.5)

pdb 3QC7 

VG9_BPPH2Tail protein (Late protein GP9)

17 entries

Bacillus phage B103 (Bacteriophage B103)

Select_all Deselect_all  
DPOL_BPB03DNA polymerase (EC 2.7.7.7) (Early protein GP2)
HEAD_BPB03Major head protein (Late protein Gp8)
LYS_BPB03Lysozyme (EC 3.2.1.17) (Endolysin) (Lysis protein) (Morphogenesis protein 2) ...
SSB_BPB03Single-strand-binding protein (SSB) (Early protein GP5)
TERM_BPB03DNA terminal protein (Protein GP3)
VG10_BPB03Upper collar protein (Connector protein) (Late protein GP10)
VG11_BPB03Lower collar protein (Late protein GP11)
VG12_BPB03Pre-neck appendage protein (Late protein GP12)
VG13_BPB03Morphogenesis protein 1 (Late protein GP13)
VG14_BPB03Lysis protein (Late protein GP14)
VG16_BPB03Encapsidation protein (Late protein GP16)
VG17_BPB03Early protein GP17
VG4_BPB03Late genes activator (Early protein GP4)
VG6_BPB03Early protein GP6
VG7_BPB03Head morphogenesis protein (Late protein GP7)
VG85_BPB03Head fiber protein (Late protein GP8.5)
VG9_BPB03Tail protein (Late protein GP9)

6 entries

Bacillus phage phi15 (Bacteriophage phi-15)

Select_all Deselect_all  
VG165_BPPH5Early protein GP16.5
VG166_BPPH5Early protein GP16.6
VG167_BPPH5Early protein GP16.7
VG168_BPPH5Early protein GP16.8
VG169_BPPH5Early protein GP16.9
VG17_BPPH5Early protein GP17

5 entries

Streptococcus phage Cp-1 (Bacteriophage Cp-1)

Select_all Deselect_all  
DPOL_BPCP1DNA polymerase (EC 2.7.7.7)
HEAD_BPCP1Major head protein (Gp9)
LYS_BPCP1Lysozyme (EC 3.2.1.17) (CP-1 lysin) (Endolysin) (Muramidase)

pdb 1H09  1OBA  2IXU  2IXV  2J8F  2J8G 

TERM_BPCP1Terminal protein
VLYS_BPCP1Holin (Lysis protein)

3 entries

Bacillus phage Nf (Bacteriophage Nf)

Select_all Deselect_all  
TERM_BPNFDNA terminal protein (Protein GP3)
VG4_BPNFLate genes activator (Early protein GP4) (GPF)
VG85_BPNFHead fiber protein (Late protein GP8.5)

1 entry

Bacillus phage GA-1 (Bacteriophage GA-1)


HEAD_BPGA1Major head protein

1 entry

Bacillus phage M2 (Bacteriophage M2)


DPOL_BPM2DNA polymerase (EC 2.7.7.7)

1 entry

Streptococcus phage Cp-7 (Bacteriophage Cp-7)


LYS_BPCP7Lysozyme (EC 3.2.1.17) (CP-7 lysin) (Endolysin) (Muramidase)

1 entry

Streptococcus phage Cp-9 (Bacteriophage Cp-9)


LYS_BPCP9Lysozyme (EC 3.2.1.17) (CP-9 lysin) (Endolysin) (Muramidase)