T=2 icosahedral capsid protein (kw:KW-1141)


image The capsid is composed 60 asymmetric units made of 2 protein (T=2*), for a total of 120 capsid proteins.
The T=2* symmetry is an nonofficial appellation, to be rigorous the capsid has a T=1 symmetry with each unit composed of a homodimer.

image

Icosahedric triangulation number is calculated following Caspar and Klug system

Viral molecular biology Virion
Virus entry
Virus latency
Transcription and replication
Host-virus interactions
Virus exit
Icosahedric capsids Virus symmetry and T number
T=1
T=2*
T=3
Pseudo T=3
T=4
T=7
T=9
T=13
T=16
T=21/pseudo T=21
T=25/pseudo T=25
T=27/pseudo T=27
T=28
T=31/pseudo T=31
T=75 bacterial carboxysome
T=169
Links Uniprot Keyword: KW-1141
GO ontology: GO:0039616
Virus dsRNA
Cystoviridae
Partitiviridae
Picobirnaviridae
Reoviridae
Totiviridae

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

41 entries grouped by strain

1 entry

Aedes pseudoscutellaris reovirus (isolate France) (ApRV) reference strain

CAPSD_APRVF Putative major capsid protein VP3

1 entry

Aquareovirus C (isolate Golden shiner/USA/GSRV/1977) (AQRV-C) reference strain

CAPSD_AQRVC Major inner capsid protein VP3 (EC 3.6.4.13) (ATP-dependent DNA helicase VP3)

1 entry

Aquareovirus G (isolate American grass carp/USA/PB01-155/-) (AQRV-G) reference strain

CAPSD_AQRVG Major inner capsid protein VP3 (EC 3.6.4.13) (ATP-dependent DNA helicase VP3)

1 entry

Fiji disease virus (isolate Sugarcane) (FDV) reference strain

CAPSD_FDVS Putative major capsid protein

1 entry

Giardia lamblia virus (isolate Wang) (GLV) reference strain

CAPSD_GLVWB Major capsid protein (Gag protein) (Major coat protein)

1 entry

Helminthosporium victoriae virus-190S (Hv190SV) reference strain

CAPSD_HV19S Major capsid protein (Major coat protein)

1 entry

Leishmania RNA virus 1 - 1 (isolate Leishmania guyanensis) (LRV-1-1) reference strain

CAPSD_LRVLG Major capsid protein (Major coat protein)

1 entry

Lymantria dispar cypovirus 1 (isolate Rao) (LdCPV-1) reference strain

CAPSD_LDCPR Major capsid protein VP1

1 entry

Micromonas pusilla reovirus (isolate Netherlands/2005) (MpRV) reference strain

CAPSD_MPRVN Major inner capsid protein VP3

1 entry

Pseudomonas phage phi6 (Bacteriophage phi-6) reference strain

P1_BPPH6 Major inner protein P1

pdb 4BTG; 4BTQ; 4K7H; 5FJ5; 5FJ7; 5MUU; 6HY0

1 entry

Rice ragged stunt virus (isolate Thailand) (RRSV) reference strain

CAPSD_RRSVT Major inner capsid protein VP3 (Major core capsid protein VP3)

1 entry

Rotavirus A (isolate RVA/Monkey/South Africa/SA11-H96/1958/G3P5B[2]) (RV-A) (Simian Agent 11 (isolate SI/South Africa/H96/58)) reference strain

VP2_ROTSH Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A) (Simian Agent 11 (strain Both)) reference strain

VP2_ROTS1 Inner capsid protein VP2

1 entry

Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989) (RV-C) reference strain

VP2_ROTHC Inner capsid protein VP2

1 entry

Rotavirus X (isolate RVX/Human/Bangladesh/NADRV-B219/2002/GXP[X]) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-B219)) reference strain

VP2_ROTB2 Inner capsid protein VP2

1 entry

Rotavirus X (strain RVX/Human/China/NADRV-J19/1997/GXP[X]) (RV ADRV-N) (Rotavirus (isolate novel adult diarrhea rotavirus-J19)) reference strain

VP2_ROTJ1 Inner capsid protein VP2

1 entry

Aquareovirus A (isolate Chum salmon/Japan/CSRV/1981) (AQRV-A)

CAPSD_AQRVA Major inner capsid protein VP3 (EC 3.6.4.13) (ATP-dependent DNA helicase VP3)

1 entry

Bombyx mori cytoplasmic polyhedrosis virus (BmCPV)

CAPSD_CPVBM Capsid protein VP1

pdb 3CNF; 3IZ3; 3IZX; 3J17; 3JAY; 3JAZ; 3JB0; 3JB1; 3JB2; 3JB3; 5H0S

1 entry

Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14]) (RV-A) (Rotavirus A (isolate B4106))

VP2_ROT41 Inner capsid protein VP2

1 entry

Rotavirus A (isolate RVA/Human/United Kingdom/A64/1987/G10P11[14]) (RV-A)

VP2_ROTH7 Inner capsid protein VP2

1 entry

Rotavirus A (isolate RVA/Human/United States/WI61/1983/G9P1A[8]) (RV-A)

VP2_ROTWI Inner capsid protein VP2

1 entry

Rotavirus A (isolate RVA/Monkey/United States/TUCH/2003/G3P[24]) (RV-A)

VP2_ROTTU Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1]) (RV-A)

VP2_ROTRF Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Cow/United Kingdom/UK/1975/G6P7[5]) (RV-A)

VP2_ROTBU Inner capsid protein VP2

pdb 3KZ4

1 entry

Rotavirus A (strain RVA/Cow/United States/NCDV-Lincoln/1969/G6P6[1]) (RV-A) (Rotavirus A (strain Nebraska calf diarrhea virus))

VP2_ROTBN Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Cow/United States/WC3/1981/G6P7[5]) (RV-A) (Rotavirus (strain Wistar calf 3))

VP2_ROTW3 Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10]) (RV-A)

VP2_ROTH6 Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)

VP2_ROTH3 Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)

VP2_ROTHK Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/Japan/S2/1980/G2P1B[4]) (RV-A)

VP2_ROTHS Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/Japan/YO/1977/G3P1A[8]) (RV-A)

VP2_ROTYO Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4]) (RV-A)

VP2_ROTHL Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6]) (RV-A) (Rotavirus A (strain St. Thomas 3))

VP2_ROTHT Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8]) (RV-A)

VP2_ROTAD Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4]) (RV-A) (Rotavirus A (strain DS1))

VP2_ROTHD Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8]) (RV-A)

VP2_ROTHP Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8]) (RV-A)

VP2_ROTHW Inner capsid protein VP2

1 entry

Rotavirus A (strain RVA/SA11-Ramig/G3P[X]) (RV-A) (Simian Agent 11 (strain Ramig))

VP2_ROTSR Inner capsid protein VP2

1 entry

Rotavirus B (isolate RVB/Human/China/ADRV/1982) (RV-B) (Rotavirus B (isolate adult diarrhea rotavirus))

VP2_ROTGA Inner capsid protein VP2

1 entry

Rotavirus B (isolate RVB/Rat/United States/IDIR/1984/G1P[X]) (RV-B) (Rotavirus B (isolate infectious diarrhea of infant rats))

VP2_ROTGI Inner capsid protein VP2

1 entry

Rotavirus C (strain RVC/Pig/United States/Cowden/1980) (RV-C)

VP2_ROTPC Inner capsid protein VP2