Nanovirus

Molecular biology

VIRION

Non-enveloped, round, icosahedral symmetry (T=1), about 18-19 nm in diameter.

GENOME

6-8 circular genomic (+)ssDNA about 1kb in size. Each ssDNA have a common stem-loop region and are encapsidated in a separate particle.
In addition to genomic DNA, up to 4 satellite-like DNAs are commonly found, usually encoding for accessory Rep proteins (para-Rep). These satellite-rep proteins are only able to initiate replication of their genomic DNA, unlike genomic encoded Master-Rep (M-Rep) which promotes replication of all 6-8 viral genomic ssDNAs (trans-replication).

GENE EXPRESSION

Each genome ssDNA is monocistronic.

REPLICATION

NUCLEAR

  1. Virus penetrates into the host cell.
  2. Uncoating, and release of the viral genomic ssDNA into the nucleus.
  3. The ssDNA is converted into dsDNA with the participation of cellular factors.
  4. Transcription from the intergenic region (IR) promoter produces viral mRNAs and translation of viral proteins.
  5. Replication is initiated by cleavage of the(+)strand in the IR by Rep, and occurs by rolling circle producing ssDNA genomes.
  6. These newly synthesized ssDNA can either
    a) be converted to dsDNA and serve as a template for transcription/replication
    b) be encapsidated by CP and form virions that will be released in the extracellular space.

Matching UniProtKB/Swiss-Prot entries

42 entries grouped by strain

Only complete proteome entries are shown ( view all 44 entries)

8 entries

Subterranean clover stunt virus (strain F) (SCSV) reference strain

Select_all Deselect_all  
CAPSD_SCSVFCapsid protein (CP) (Coat protein)
CLINK_SCSVFCell cycle link protein (Clink)
MREP_SCSVFMaster replication protein (M-Rep) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3)
MVP_SCSVFPutative movement protein (MP)
NSP_SCSVFPutative nuclear shuttle protein
REP2_SCSVFPara-Rep C2 (Rep2) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) ...
REP6_SCSVFPara-Rep C6 (Rep6) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) ...
U1_SCSVFProtein U1

12 entries

Milk vetch dwarf virus (isolate N) (MDV)

Select_all Deselect_all  
CAPSD_MDV1Capsid protein (CP) (Coat protein)
CLINK_MDV1Cell cycle link protein (Clink)
MREP_MDV1Master replication protein (M-Rep) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3)
MVP_MDV1Putative movement protein (MP)
NSP_MDV1Putative nuclear shuttle protein
REP10_MDV1Para-Rep C10 (Rep10) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) ...
REP1_MDV1Para-Rep C1 (Rep1) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) ...
REP2_MDV1Para-Rep C2 (Rep2) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) ...
REP3_MDV1Para-Rep C3 (Rep3) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) ...
U1_MDV1Protein U1
U2_MDV1Protein U2
U4_MDV1Protein U4

11 entries

Faba bean necrotic yellows virus (isolate Egyptian EV1-93) (FBNYV)

Select_all Deselect_all  
CAPSD_FBNY1Capsid protein (CP) (Coat protein)
CLINK_FBNY1Cell cycle link protein (Clink)
MREP_FBNY1Master replication protein (M-Rep) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) ...
MVP_FBNY1Putative movement protein (MP)
NSP_FBNY1Putative nuclear shuttle protein
REP1_FBNY1Para-Rep C1 (Rep1) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) (ATP-dependent ...
REP7_FBNY1Para-Rep C7 (Rep7) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) (ATP-dependent ...
REP9_FBNY1Para-Rep C9 (Rep9) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) (ATP-dependent ...
U1_FBNY1Protein U1
U2_FBNY1Protein U2
U4_FBNY1Protein U4

11 entries

Faba bean necrotic yellows virus (isolate SV292-88) (FBNYV)

Select_all Deselect_all  
CAPSD_FBNY2Capsid protein (CP) (Coat protein)
CLINK_FBNY2Cell cycle link protein (Clink)
MREP_FBNY2Master replication protein (M-Rep) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) ...
MVP_FBNY2Putative movement protein (MP)
NSP_FBNY2Putative nuclear shuttle protein
REP1_FBNY2Para-Rep C1 (Rep1) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) (ATP-dependent ...
REP7_FBNY2Para-Rep C7 (Rep7) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) (ATP-dependent ...
REP9_FBNY2Para-Rep C9 (Rep9) (EC 2.7.7.-) (EC 3.1.21.-) (EC 3.6.1.3) (ATP-dependent ...
U1_FBNY2Protein U1
U2_FBNY2Protein U2
U4_FBNY2Protein U4