Phytoreovirus

Molecular biology

VIRION

Non enveloped, icosahedral, non-turreted virion with a double capsid structure, about 70 nm in diameter. The outer capsid has an icosahedral T=13 symmetry, the inner capsid an icosahedral symmetry T=2. Each double-layered capsid consists of 260 trimers of the major outer capsid P8 protein and 60 dimers of the inner capsid P3 protein.

GENOME

Segmented dsRNA linear genome. Contains 12 segments coding for 15 proteins. Segment 11 has two in-frame codons resulting in two ORFs. Segment 12 has two additional overlapping ORFs. Segments size range from 1066 to 4423 bp. Genome total size is about 26 kb (WTV).

GENE EXPRESSION

The dsRNA genome is never completely uncoated, to prevent activation of antiviral state by the cell in response of dsRNA. The viral polymerase synthesizes a capped mRNA from each dsRNA segment. This capped mRNA is translocated to the cell cytoplasm where it is translated.

REPLICATION

CYTOPLASMIC

  1. Virus penetrates into the cytoplasm.
  2. Transcription of the dsRNA genome by viral polymerase occurs inside the virion, so that dsRNA is never exposed to the cytoplasm. This plus-strand transcript is used as template for translation.
  3. (+)RNAs are encapsidated in virion particle, inside which they are transcribed to give RNA (-) molecules with which they become base-paired to produce dsRNA genomes.
  4. Mature virions are released presumably following cell death and associated breakdown of host plasma membrane.

Matching UniProtKB/Swiss-Prot entries

24 entries grouped by strain

Only complete proteome entries are shown ( view all 55 entries)

12 entries

Rice dwarf virus (isolate Fujian) (RDV) reference strain

Select_all Deselect_all  
MCE_RDVFPutative mRNA-capping enzyme P5 (Structural protein 5) (mRNA ...
MVP_RDVFMovement protein (Non-structural protein 6) (Pns6)
NSP11_RDVFRNA-binding protein (Non-structural protein 11) (Pns11)
NSP12_RDVFNon-structural protein 12A (Pns12A)
NSP4_RDVFNon-structural protein 4 (Pns4)
P2_RDVFMinor outer capsid protein P2
P3_RDVFOuter capsid protein P3 (Core protein P3)
P7_RDVFProtein P7 (55 kDa core protein)
P8_RDVFOuter capsid protein P8 (Structural protein P8)
P9_RDVFMinor outer capsid protein P9
RDRP_RDVFRNA-directed RNA polymerase P1 (EC 2.7.7.48) (Replicase)
VSR_RDVFSuppressor of RNA-mediated gene silencing (Non-structural protein 10) (Pns10)

12 entries

Rice gall dwarf virus (RGDV) reference strain

Select_all Deselect_all  
MCE_RGDVPutative mRNA-capping enzyme P5 (Structural protein 5) (mRNA ...
MVP_RGDVMovement protein (Non-structural protein 7) (Pns7)
NSP11_RGDVRNA-binding protein (Non-structural protein 12) (Pns12)
NSP12_RGDVNon-structural protein 9 (Pns9)
NSP4_RGDVNon-structural protein 4 (Pns4)
P2_RGDVMinor outer capsid protein P2
P3_RGDVOuter capsid protein P3 (Core protein P3)
P7_RGDVProtein P7
P8_RGDVOuter capsid protein P8 (Structural protein P8)
P9_RGDVMinor outer capsid protein P9 (Protein Pns10)
RDRP_RGDVRNA-directed RNA polymerase P1 (EC 2.7.7.48) (Replicase)
VSR_RGDVSuppressor of RNA-mediated gene silencing (Non-structural protein 11) (Pns11)