Corticoviridae (taxid:10659)

VIRION

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Icosahedral pseudo T=21 capsid 56 nm in diameter, composed of 1200 P1 (spike) and 60 P2 (capsid) proteins. The pentameric receptor-binding spikes are protruding from the 12 fivefold axes. The capsid encloses an internal lipid core containing the structural proteins P3 to P9.

  • Double jelly roll-fold major capsid protein [MCP P2]
  • Triple jelly roll-fold penton capsid protein [Spike P1]
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GENOME

Circular, supercoiled dsDNA genome of about 10 kb encoding for 21 proteins. Displays a very high number of negative supercoils.

GENE EXPRESSION

The genome is organized in three operons.

ENZYMES

REPLICATION

CYTOPLASMIC

  1. Adsorption: the phage attach to target cell
  2. Injection: viral DNA is injected in host cell cytoplasm
  3. Transcription and translation of early genes
  4. Replication of genomic DNA via a rolling-circle mechanism
  5. Transcription and translation of late genes
  6. Capsid proteins polymerize around a lipoprotein vesicle translocated in the cytoplasm by virion assembly factors.
  7. Genomic DNA is packaged in new virions
  8. Mature virions are released from the cell by lysis

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

21 entries grouped by protein

1 entry

Major capsid protein P2 (Protein II)

CAPSD_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Peptidoglycan hydrolase P7 (Protein VII)

EXLYS_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Uncharacterized protein Gp-a

GPA_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Uncharacterized protein Gp-b*

GPB_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Uncharacterized protein Gp-c

GPC_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Uncharacterized protein Gp-d

GPD_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Uncharacterized protein Gp-e

GPE_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Uncharacterized protein Gp-h

GPH_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Uncharacterized protein Gp-j

GPJ_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Uncharacterized protein Gp-k

GPK_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Uncharacterized protein Gp-l

GPL_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Probable replication protein P12 (EC 3.1.-.-) (Protein XII)

P12_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Transcription factor P13 (Protein XIII)

P13_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Uncharacterized protein P14 (Protein XIV)

P14_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Protein P3 (Protein III)

P3_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Protein P4 (Protein IV)

P4_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Protein P5 (Protein V)

P5_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Protein P6 (Protein VI)

P6_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Protein P8 (Protein VIII)

P8_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Protein P9 (Protein IX)

P9_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain

1 entry

Spike protein P1 (Protein I)

SPIKE_BPPM2
Pseudoalteromonas phage PM2 (Bacteriophage PM2) reference strain