Most temperate phages encode an integrase for both integration and excision. Excision may require an accessory protein called excisionase or recombination directionality factor to promote excision Excision is the recombination event that leads to the release of a viral genome that was formerly integrated into the host DNA chromosome as a provirus. This release is usually induced upon changes in the host cell physiology (induction).
NB. Aberrant excision may occur. Small pieces of bacterial DNA may become excised and packaged into the bacteriophage capsid together with the bacteriophage genome. This exchange of genetic information is called transduction .
Two-step site selection for serine-integrase-mediated excision: DNA-directed integrase conformation and central dinucleotide proofreading
Pallavi Ghosh, Lori A Bibb, Graham F Hatfull
Proc. Natl. Acad. Sci. U.S.A. March 4, 2008; 105: 3238-3243
Bacteriophage P22-mediated specialized transduction in Salmonella typhimurium: high frequency of aberrant prophage excision
D Y Kwoh, J Kemper
J. Virol. September 1978; 27: 519-534
Crystal structure of the excisionase-DNA complex from bacteriophage lambda
My D Sam, Duilio Cascio, Reid C Johnson, Robert T Clubb
J. Mol. Biol. April 23, 2004; 338: 229-240
Structural insight into DNA binding and oligomerization of the multifunctional Cox protein of bacteriophage P2
Ronnie P-A Berntsson, Richard Odegrip, Wilhelmina Sehlen, Karin Skaar, Linda M Svensson, Tariq Massad, Martin Hogbom, Elisabeth Haggard-Ljungquist, Pal Stenmark
Nucleic Acids Res. November 19, 2013;
Purification and Characterization of Bacteriophage P22 Xis Protein
Aras N. Mattis, Richard I. Gumport, Jeffrey F. Gardner
J Bacteriol September 2008; 190: 5781-5796
Efficient reversal of phiC31 integrase recombination in mammalian cells
Alfonso P Farruggio, Christopher L Chavez, Carlos L Mikell, Michele P Calos
Biotechnol J November 2012; 7: 1332-1336
Identification and characterization of mycobacteriophage L5 excisionase
J. A. Lewis, G. F. Hatfull
Mol. Microbiol. January 2000; 35: 350-360
Structural and regulatory divergence among site-specific recombination genes of lambdoid phage
J. M. Leong, S. E. Nunes-D?by, A. B. Oser, C. F. Lesser, P. Youderian, M. M. Susskind, A. Landy
J. Mol. Biol. June 20, 1986; 189: 603-616