Piscihepevirus (taxid:1678142)



Quasi-enveloped (?), spherical, about 32-34 nm in diameter. The RNA genome is enclosed within a capsid that is composed of 180 capsid proteins, assembled into a T=3 icosahedral particle.



Monopartite, linear, ssRNA(+) genome of 7.3 kb. The 5' end is capped and the 3' terminus is polyadenylated. Their is no VPg at the 5'-terminus of the genome. The genome consists of three partially overlapping ORFs.


The virion RNA is infectious and serves as both the genome and viral messenger RNA. ORF 1 encodes the nonstructural proteins, it is not clear whether this polyprotein is cleaved or not; ORF 2 encodes the capsid protein; ORF 3 encodes a small immunogenic protein.



  1. Attachment of the virus to host receptors mediates internalization into the host cell by clathrin-mediated endocytosis.
  2. RNA genome is released into the cytoplasm.
  3. The positive-sense genomic ssRNA is translated into a processed ORF1 polyprotein to yield the mature non-structural proteins involved in RNA transcription.
  4. Replication takes place in cytoplasmic viral factories. A dsRNA genome is synthesized from the genomic ssRNA(+).
  5. The dsRNA genome is transcribed/replicated thereby providing viral mRNAs/new ssRNA(+) genomes.
  6. Virus assembly and release.
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Cutthroat trout virus taxid:1016879

Protein ModelArchive
Phosphoprotein ma-jd-viral-60336
Polyprotein ma-jd-viral-34729
Polyprotein ma-jd-viral-36486
Polyprotein ma-jd-viral-60722
Pro-secreted protein ORF2 (pORF2) (Protein ORF2) ma-jd-viral-33613