T=4 icosahedral capsid protein (kw:KW-1144)


image The capsid is composed 60 asymmetric units made of 4 proteins (T=4), for a total of 240 capsid proteins.



image

Icosahedric triangulation number is calculated following Caspar and Klug system

Viral molecular biology Virion
Virus entry
Virus latency
Transcription and replication
Host-virus interactions
Virus exit
Icosahedric capsids Virus symmetry and T number
T=1
T=2*
T=3
Pseudo T=3
T=4
T=7
T=9
T=13
T=16
T=21/pseudo T=21
T=25/pseudo T=25
T=27/pseudo T=27
T=28
T=31/pseudo T=31
T=75 bacterial carboxysome
T=169
Links image
Uniprot Keyword: KW-1144
GO ontology: GO:0039619
Virus ssRNA+
Tetraviridae
Togaviridae
dsDNA(RT)
Hepadnaviridae

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

101 entries grouped by protein

58 entries

Capsid protein (Core antigen) (Core protein) (HBcAg) (p21.5)

Select_allDeselect_all
CAPSD_DHBVQ
Duck hepatitis B virus (isolate Shanghai/DHBVQCA34) (DHBV) reference strain

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HASV
Helicoverpa armigera stunt virus (HaSV) reference strain

Capsid protein (CP) (Coat protein)

pdb 3S6P

CAPSD_HBVC1
Hepatitis B virus genotype C subtype adr (isolate Japan/Nishioka/1983) (HBV-C) reference strain
CAPSD_HBVCJ
Hepatitis B virus genotype C subtype ayr (isolate Human/Japan/Okamoto/-) (HBV-C) reference strain

pdb 5E00; 7ABL

CAPSD_HBVD3
Hepatitis B virus genotype D subtype ayw (isolate France/Tiollais/1979) (HBV-D) reference strain

pdb 6HTX; 6HU4; 6HU7; 7OCO; 7OCW; 7OD4; 7OD6; 7OD7; 7OD8; 7OEN; 7OEV; 7OEW; 7PZ9; 7PZI; 7PZK; 7PZL; 7PZM; 7PZN; 8G5V; 8G6V; 8PWO

CAPSD_HBVD4
Hepatitis B virus genotype D subtype ayw (isolate Japan/JYW796/1988) (HBV-D) reference strain
CAPSD_NCBVS
Nudaurelia capensis beta virus (isolate Pine emperor moth/South Africa) (NbetaV) reference strain

Capsid protein (CP) (Coat protein)

CAPSD_WHV5
Woodchuck hepatitis B virus (isolate 8) (WHV) reference strain
CAPSD_ASHV
Arctic squirrel hepatitis virus (ASHV)
CAPSD_DHBV1
Duck hepatitis B virus (strain United States/DHBV-16) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

pdb 6YGH; 6YGI

CAPSD_DHBV3
Duck hepatitis B virus (strain Germany/DHBV-3) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_GSHV
Ground squirrel hepatitis virus (strain 27) (GSHV)
CAPSD_HBVA2
Hepatitis B virus genotype A2 subtype adw (isolate Japan/Nishioka/1983) (HBV-A)

pdb 3J2V; 6UI6; 6UI7

CAPSD_HBVA3
Hepatitis B virus genotype A2 subtype adw2 (strain Rutter 1979) (HBV-A)
CAPSD_HBVA4
Hepatitis B virus genotype A2 subtype adw2 (isolate Germany/991/1990) (HBV-A)
CAPSD_HBVA5
Hepatitis B virus genotype A1 subtype adw (isolate Philippines/pFDW294/1988) (HBV-A)
CAPSD_HBVA6
Hepatitis B virus genotype A1 subtype adw2 (isolate South Africa/84/2001) (HBV-A)
CAPSD_HBVA7
Hepatitis B virus genotype A2 (isolate Japan/11D11HCCW/1998) (HBV-A)
CAPSD_HBVA8
Hepatitis B virus genotype A3 (isolate Cameroon/CMR983/1994) (HBV-A)
CAPSD_HBVA9
Hepatitis B virus genotype A3 (isolate Cameroon/CMR711/1994) (HBV-A)
CAPSD_HBVB1
Hepatitis B virus genotype B1 subtype adw (isolate Japan/pJDW233/1988) (HBV-B)
CAPSD_HBVB2
Hepatitis B virus genotype B2 (isolate Indonesia/pIDW420/1988) (HBV-B)
CAPSD_HBVB3
Hepatitis B virus genotype B2 (isolate Vietnam/9873/1997) (HBV-B)
CAPSD_HBVB4
Hepatitis B virus genotype B/C subtype adw (isolate Okinawa/pODW282/1998) (HBV-B)
CAPSD_HBVB6
Hepatitis B virus genotype B2 subtype adw (isolate China/patient4/1996) (HBV-B)
CAPSD_HBVB7
Hepatitis B virus genotype B1 (isolate Japan/Yamagata-2/1998) (HBV-B)
CAPSD_HBVB8
Hepatitis B virus genotype B1 (isolate Japan/Ry30/2002) (HBV-B)
CAPSD_HBVC0
Hepatitis B virus genotype C (isolate Vietnam/3270/2000) (HBV-C)
CAPSD_HBVC2
Hepatitis B virus genotype C subtype ar (isolate Japan/S-207/1988) (HBV-C)
CAPSD_HBVC3
Hepatitis B virus genotype C subtype adr (strain Japan/adr4/1983) (HBV-C)
CAPSD_HBVC4
Hepatitis B virus genotype C subtype adr (isolate Korea/Kim/1989) (HBV-C)
CAPSD_HBVC5
Hepatitis B virus genotype C subtype ad (isolate Japan/S-179/1988) (HBV-C)
CAPSD_HBVC7
Hepatitis B virus genotype C subtype ayw (isolate China/Tibet127/2002) (HBV-C)
CAPSD_HBVC8
Hepatitis B virus genotype C subtype adr (isolate Japan/A4/1994) (HBV-C)
CAPSD_HBVC9
Hepatitis B virus genotype C subtype ayw (isolate Australia/AustRC/1992) (HBV-C)
CAPSD_HBVCP
Chimpanzee hepatitis B virus (isolate United Kingdom/LSH/1988) (HBVcpz)

pdb 1HHH

CAPSD_HBVD1
Hepatitis B virus genotype D subtype adw (isolate United Kingdom/adyw/1979) (HBV-D)

pdb 2G33; 2G34; 2QIJ; 3KXS; 4BMG; 4G93; 5D7Y; 5E0I; 5GMZ; 5WTW; 6BVF; 6BVN; 6CWD; 6CWT; 6J10; 6VZP; 6W0K; 6WFS; 7K5M; 7S76; 7UMI; 8GBU; 8I71; 8KHU

CAPSD_HBVD2
Hepatitis B virus genotype D (isolate France/alpha1/1989) (HBV-D)
CAPSD_HBVD5
Hepatitis B virus genotype D subtype ayw (isolate Australia/AustKW/1991) (HBV-D)
CAPSD_HBVD6
Hepatitis B virus genotype D subtype ayw (isolate Italy/CI/1992) (HBV-D)
CAPSD_HBVD7
Hepatitis B virus genotype D (isolate Germany/1-91/1991) (HBV-D)
CAPSD_HBVF1
Hepatitis B virus genotype F2 (isolate Brazil/w4B) (HBV-F)
CAPSD_HBVF6
Hepatitis B virus genotype F2 subtype adw4q (isolate Senegal/9203) (HBV-F)
CAPSD_HBVG1
Hepatitis B virus genotype G subtype adw2 (isolate United States/sf/1990) (HBV-G)
CAPSD_HBVG2
Hepatitis B virus genotype G (isolate United States/USG17/2002) (HBV-G)
CAPSD_HBVG3
Hepatitis B virus genotype G (isolate IG29227/2000) (HBV-G)
CAPSD_HBVGB
Gibbon hepatitis B virus subtype ayw3q (isolate Hope) (HBVgbn)
CAPSD_HBVGO
Gorilla hepatitis B virus (isolate Cameroon/gor97) (HBVgor)
CAPSD_HBVH3
Hepatitis B virus genotype H subtype adw4 (isolate Nicaragua/2928Nic/1997) (HBV-H)
CAPSD_HHBV
Heron hepatitis B virus (HHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HPBDB
Duck hepatitis B virus (isolate brown Shanghai duck S5) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HPBDC
Duck hepatitis B virus (strain China) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_HPBDW
Duck hepatitis B virus (isolate white Shanghai duck S31) (DHBV)

Capsid protein (Core antigen) (Core protein) (HBcAg)

CAPSD_WHV1
Woodchuck hepatitis B virus (isolate 1) (WHV)
CAPSD_WHV2
Woodchuck hepatitis B virus (isolate 2) (WHV)
CAPSD_WHV3
Woodchuck hepatitis B virus (isolate 59) (WHV)
CAPSD_WHV4
Woodchuck hepatitis B virus (isolate 7) (WHV)
CAPSD_WMHBV
Woolly monkey hepatitis B virus (isolate Louisville) (WMHBV)

40 entries

Structural polyprotein (p130)

Select_allDeselect_all
POLS_CHIKS
Chikungunya virus (strain S27-African prototype) (CHIKV) reference strain

pdb 2RSW; 7CVY; 7CVZ; 7CW0; 7CW2; 7CW3

POLS_RUBVT
Rubella virus (strain Therien) (RUBV) reference strain

Structural polyprotein (p110)

pdb 5KHE; 5KHF

POLS_SFV
Semliki forest virus (SFV) reference strain

pdb 1DYL; 1I9W; 1RER; 1VCP; 1VCQ; 2ALA; 2V33; 8D87; 8IHP

POLS_SINDV
Sindbis virus (SINV) reference strain

pdb 1KXA; 1KXB; 1KXC; 1KXD; 1KXE; 1KXF; 1LD4; 1SVP; 1Z8Y; 2SNV; 2SNW; 3J0F; 3MUU; 3MUW

POLS_AURAV
Aura virus (AURAV)

pdb 4AGJ; 4AGK; 4UON; 5G4B

POLS_BFV
Barmah forest virus (BFV)

pdb 2YEW

POLS_CHIK3
Chikungunya virus (strain 37997) (CHIKV)

pdb 3J2W; 5VU2; 6NK5; 6NK6; 8DWW; 8DWX; 8DWY; 8EWF

POLS_CHIKN
Chikungunya virus (strain Nagpur) (CHIKV)
POLS_EEEV
Eastern equine encephalitis virus (EEEV) (Eastern equine encephalomyelitis virus)

pdb 8UA4; 8UA9

POLS_EEEV1
Eastern equine encephalitis virus (strain PE-0.0155) (EEEV) (Eastern equine encephalomyelitis virus)
POLS_EEEV3
Eastern equine encephalitis virus (strain va33[ten broeck]) (EEEV) (Eastern equine encephalomyelitis virus)

pdb 6MX4; 6MX7

POLS_EEEV8
Eastern equine encephalitis virus (strain PE-3.0815) (EEEV) (Eastern equine encephalomyelitis virus)
POLS_EEEVF
Eastern equine encephalitis virus (strain Florida 91-469) (EEEV) (Eastern equine encephalomyelitis virus)

pdb 6MW9; 6MWC; 6MWV; 6MWX; 6MX4; 6ODF; 6XO4; 6XOB; 7N69; 7N6A; 7V0N; 7V0O; 7V0P; 8XI4; 8XI5; 8YS2; 8YS4

POLS_EEVV3
Venezuelan equine encephalitis virus (strain 3880) (VEEV)
POLS_EEVV8
Venezuelan equine encephalitis virus (strain TC-83) (VEEV)

pdb 1EP5; 1EP6; 3J0C; 3J0G; 7SFU; 7SFV; 7SFW; 8DEQ; 8DER; 8EEU; 8EEV

POLS_EEVVE
Venezuelan equine encephalitis virus (strain Everglades Fe3-7c) (VEEV)
POLS_EEVVM
Venezuelan equine encephalitis virus (strain Mena II) (VEEV)
POLS_EEVVP
Venezuelan equine encephalitis virus (strain P676) (VEEV)
POLS_EEVVT
Venezuelan equine encephalitis virus (strain Trinidad donkey) (VEEV)

pdb 3VE6

POLS_GETV
Getah virus (GETV)

pdb 7FD2; 7V4T; 7VGA; 7WC2; 7WCO

POLS_MAYAB
Mayaro virus (strain Brazil) (MAYV)

pdb 6W1C; 6W2U; 7LIH

POLS_MIDDV
Middelburg virus
POLS_ONNVG
O'nyong-nyong virus (strain Gulu) (ONNV)

pdb 8P61

POLS_ONNVI
O'nyong-nyong virus (strain Igbo Ora) (ONNV) (Igbo Ora virus)
POLS_ONNVS
O'nyong-nyong virus (strain SG650) (ONNV)
POLS_RRVN
Ross river virus (strain NB5092) (RRV)
POLS_RRVT
Ross river virus (strain T48) (RRV)

pdb 6VYV

POLS_RUBVB
Rubella virus (strain BRD1) (RUBV)

Structural polyprotein (p110)

POLS_RUBVC
Rubella virus (strain BRDII) (RUBV)

Structural polyprotein (p110)

POLS_RUBVD
Rubella virus (strain Cendehill) (RUBV)

Structural polyprotein (p110)

POLS_RUBVM
Rubella virus (strain M33) (RUBV)

Structural polyprotein (p110)

pdb 4ADG; 4ADI; 4ADJ; 4B3V; 4HAR; 4HBE; 4HBO; 5KHC

POLS_RUBVN
Rubella virus (strain RN-UK86) (RUBV)

Structural polyprotein (p110)

POLS_RUBVO
Rubella virus (strain TO-336 vaccine) (RUBV)

Structural polyprotein (p110)

POLS_RUBVR
Rubella virus (strain RA27/3 vaccine) (RUBV)

Structural polyprotein (p110)

POLS_RUBVV
Rubella virus (strain TO-336) (RUBV)

Structural polyprotein (p110)

POLS_SAGV
Sagiyama virus (SAGV)
POLS_SINDO
Sindbis virus subtype Ockelbo (strain Edsbyn 82-5) (OCKV) (Ockelbo virus)

pdb 1WYK

POLS_SLDV
Sleeping disease virus (SDV)
POLS_SPDV
Salmon pancreas disease virus (SPDV)
POLS_WEEV
Western equine encephalitis virus (WEEV)

pdb 8DEC; 8DED; 8DEE; 8DEF; 8SQN

3 entries

Frameshifted structural polyprotein (p130)

Select_allDeselect_all
POLSF_CHIKS
Chikungunya virus (strain S27-African prototype) (CHIKV) reference strain

pdb 5H23

POLSF_SINDV
Sindbis virus (SINV) reference strain
POLSF_SFV
Semliki forest virus (SFV)