Inhibition of host RLR pathway by virus (kw:KW-1113)

The cellular RIG-like receptors (RLR) belong to an innate sensor pathway that recognize RNA virus products and activates cellular antiviral state. Upon viral infection, RIG-I and related RNA helicases, MDA5 and LGP2 recognize viral "foreign" RNA and trigger intracellular signaling events that induce innate immunity, the first line of defense against microbial infection. These sentry proteins initiate a signaling cascade by interacting with the downstream partner MAVS, located to the mitochondria. Downstream signaling, resulting in the production of cytokines and interferons, has been linked to a number of pathways that ultimately activate transcription factors IRF3, IRF7 and NF-kappa-B.

Inhibition by viruses

Many viral antagonists of the signaling cascade leading to interferon production have been identified. The influenza A virus NS1 protein has been shown to inhibit RIG-I through direct interaction, while paramyxovirus V protein binds and inhibits MDA5 to abrogate its signaling actions. Hepatitis viruses A, B and C affect the cascade by impairing MAVS protein. Downstream, cellular IRF3 and IRF7 can be activated by both RLR and TLR pathway, and are targeted by many viruses including Epstein-Barr virus, Ebolaviruses, Rotaviruses or Papillomaviruses.

Comments MAVS is often described as activating IKBKE (IKK-i or IKK epsilon and/or TBK1 kinases that phosphorylates IRF3. Most results suggest that the IKBKE kinase is preferentially activated by RLR when TBK1 would be activated by TLRs and DNA sensors .

There are evidences showing direct activation of ISG (Interferon Stimulated Genes)upon IKBKE activation. IKBKE could activate STAT1-STAT2 to induce this response .

V N Z NS2 NS1 TRIM25 RIGI RIGI MDA5 M GN LMP1 ABC HBX NS3 MAVS TRAF3 MAVS IF16 zbp1 P NS3 VP35 e6 NSp1 LANA NPRO NSp1 icp0 IKKe TBK1 DDX3 orf45 K7 BZlF1 nsp1 IRF3 STING nsp3 IRF7 VP35 IRF3 IRF1 IRF3 IRF7 IRF3 IRF1

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

709 entries grouped by protein

3 entries

Protein MGF 360-11L

Select_allDeselect_all
36011_ASFK5
African swine fever virus (isolate Pig/Kenya/KEN-50/1950) (ASFV)
36011_ASFM2
African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) (ASFV)
36011_ASFP4
African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) (ASFV)

4 entries

Protein MGF 360-14L

Select_allDeselect_all
36014_ASFK5
African swine fever virus (isolate Pig/Kenya/KEN-50/1950) (ASFV)
36014_ASFM2
African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) (ASFV)
36014_ASFP4
African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) (ASFV)
36014_ASFWA
African swine fever virus (isolate Warthog/Namibia/Wart80/1980) (ASFV)

2 entries

Protein A52

Select_allDeselect_all
A52_VACCC
Vaccinia virus (strain Copenhagen) (VACV) reference strain
A52_VACCW
Vaccinia virus (strain Western Reserve) (VACV) (Vaccinia virus (strain WR)) reference strain

1 entry

Lytic switch protein BZLF1 (EB1) (Protein Z) (Trans-activator protein BZLF1) (Zta) (bZIP transcription factor ZEBRA)

BZLF1_EBVB9
Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4) reference strain

58 entries

Protein P

Select_allDeselect_all
DPOL_GSHV
Ground squirrel hepatitis virus (strain 27) (GSHV) reference strain
DPOL_HBVCJ
Hepatitis B virus genotype C subtype ayr (isolate Human/Japan/Okamoto/-) (HBV-C) reference strain
DPOL_HBVD3
Hepatitis B virus genotype D subtype ayw (isolate France/Tiollais/1979) (HBV-D) reference strain
DPOL_WHV3
Woodchuck hepatitis B virus (isolate 59) (WHV) reference strain
DPOL_WHV5
Woodchuck hepatitis B virus (isolate 8) (WHV) reference strain
DPOL_ASHV
Arctic squirrel hepatitis virus (ASHV)
DPOL_HBVA2
Hepatitis B virus genotype A2 subtype adw (isolate Japan/Nishioka/1983) (HBV-A)
DPOL_HBVA3
Hepatitis B virus genotype A2 subtype adw2 (strain Rutter 1979) (HBV-A)
DPOL_HBVA4
Hepatitis B virus genotype A2 subtype adw2 (isolate Germany/991/1990) (HBV-A)
DPOL_HBVA5
Hepatitis B virus genotype A1 subtype adw (isolate Philippines/pFDW294/1988) (HBV-A)
DPOL_HBVA6
Hepatitis B virus genotype A1 subtype adw2 (isolate South Africa/84/2001) (HBV-A)
DPOL_HBVA7
Hepatitis B virus genotype A2 (isolate Japan/11D11HCCW/1998) (HBV-A)
DPOL_HBVA8
Hepatitis B virus genotype A3 (isolate Cameroon/CMR983/1994) (HBV-A)
DPOL_HBVA9
Hepatitis B virus genotype A3 (isolate Cameroon/CMR711/1994) (HBV-A)
DPOL_HBVB1
Hepatitis B virus genotype B1 subtype adw (isolate Japan/pJDW233/1988) (HBV-B)
DPOL_HBVB2
Hepatitis B virus genotype B2 (isolate Indonesia/pIDW420/1988) (HBV-B)
DPOL_HBVB3
Hepatitis B virus genotype B2 (isolate Vietnam/9873/1997) (HBV-B)
DPOL_HBVB4
Hepatitis B virus genotype B/C subtype adw (isolate Okinawa/pODW282/1998) (HBV-B)
DPOL_HBVB5
Hepatitis B virus genotype B2 (isolate Vietnam/16091/1992) (HBV-B)
DPOL_HBVB6
Hepatitis B virus genotype B2 subtype adw (isolate China/patient4/1996) (HBV-B)
DPOL_HBVB7
Hepatitis B virus genotype B1 (isolate Japan/Yamagata-2/1998) (HBV-B)
DPOL_HBVB8
Hepatitis B virus genotype B1 (isolate Japan/Ry30/2002) (HBV-B)
DPOL_HBVC0
Hepatitis B virus genotype C (isolate Vietnam/3270/2000) (HBV-C)
DPOL_HBVC1
Hepatitis B virus genotype C subtype adr (isolate Japan/Nishioka/1983) (HBV-C)
DPOL_HBVC2
Hepatitis B virus genotype C subtype ar (isolate Japan/S-207/1988) (HBV-C)
DPOL_HBVC3
Hepatitis B virus genotype C subtype adr (strain Japan/adr4/1983) (HBV-C)
DPOL_HBVC4
Hepatitis B virus genotype C subtype adr (isolate Korea/Kim/1989) (HBV-C)
DPOL_HBVC5
Hepatitis B virus genotype C subtype ad (isolate Japan/S-179/1988) (HBV-C)
DPOL_HBVC7
Hepatitis B virus genotype C subtype ayw (isolate China/Tibet127/2002) (HBV-C)
DPOL_HBVC8
Hepatitis B virus genotype C subtype adr (isolate Japan/A4/1994) (HBV-C)
DPOL_HBVC9
Hepatitis B virus genotype C subtype ayw (isolate Australia/AustRC/1992) (HBV-C)
DPOL_HBVCP
Chimpanzee hepatitis B virus (isolate United Kingdom/LSH/1988) (HBVcpz)
DPOL_HBVD2
Hepatitis B virus genotype D (isolate France/alpha1/1989) (HBV-D)
DPOL_HBVD4
Hepatitis B virus genotype D subtype ayw (isolate Japan/JYW796/1988) (HBV-D)
DPOL_HBVD5
Hepatitis B virus genotype D subtype ayw (isolate Australia/AustKW/1991) (HBV-D)
DPOL_HBVD6
Hepatitis B virus genotype D subtype ayw (isolate Italy/CI/1992) (HBV-D)
DPOL_HBVD7
Hepatitis B virus genotype D (isolate Germany/1-91/1991) (HBV-D)
DPOL_HBVE1
Hepatitis B virus genotype E subtype ayw4 (isolate Kou) (HBV-E)
DPOL_HBVE2
Hepatitis B virus genotype E (isolate Cote d'Ivoire/ABI-129/2003) (HBV-E)
DPOL_HBVE3
Hepatitis B virus genotype E (isolate Chimpanzee/Ch195/1999) (HBV-E)
DPOL_HBVE4
Hepatitis B virus genotype E (isolate Cote d'Ivoire/ABI-212/2003) (HBV-E)
DPOL_HBVF1
Hepatitis B virus genotype F2 (isolate Brazil/w4B) (HBV-F)
DPOL_HBVF2
Hepatitis B virus genotype F1 subtype adw4 (isolate El Salvador/1116Sal/1997) (HBV-F)
DPOL_HBVF3
Hepatitis B virus genotype F1 (isolate Argentina/sa11/2000) (HBV-F)
DPOL_HBVF4
Hepatitis B virus genotype F2 (isolate Argentina/sa16/2000) (HBV-F)
DPOL_HBVF6
Hepatitis B virus genotype F2 subtype adw4q (isolate Senegal/9203) (HBV-F)
DPOL_HBVG2
Hepatitis B virus genotype G (isolate United States/USG17/2002) (HBV-G)
DPOL_HBVG3
Hepatitis B virus genotype G (isolate IG29227/2000) (HBV-G)
DPOL_HBVGB
Gibbon hepatitis B virus subtype ayw3q (isolate Hope) (HBVgbn)
DPOL_HBVGO
Gorilla hepatitis B virus (isolate Cameroon/gor97) (HBVgor)
DPOL_HBVH1
Hepatitis B virus genotype H (isolate United States/LAS2523/2002) (HBV-H)
DPOL_HBVH2
Hepatitis B virus genotype H subtype adw4 (isolate Nicaragua/1853Nic/1997) (HBV-H)
DPOL_HBVH3
Hepatitis B virus genotype H subtype adw4 (isolate Nicaragua/2928Nic/1997) (HBV-H)
DPOL_HBVOR
Orangutan hepatitis B virus (isolate Somad) (HBVoru)
DPOL_WHV1
Woodchuck hepatitis B virus (isolate 1) (WHV)
DPOL_WHV2
Woodchuck hepatitis B virus (isolate 2) (WHV)
DPOL_WHV4
Woodchuck hepatitis B virus (isolate 7) (WHV)
DPOL_WMHBV
Woolly monkey hepatitis B virus (isolate Louisville) (WMHBV)

1 entry

Protein E3 homolog (Protein E3L homolog)

E3_YLDV
Yaba-like disease virus (YLDV)

1 entry

F protein (Alternate reading frame protein/F-protein) (ARFP/F) (Frameshifted protein) (p16) (p17)

F_HCV77
Hepatitis C virus genotype 1a (isolate H77) (HCV) reference strain

18 entries

Envelopment polyprotein (M polyprotein)

Select_allDeselect_all
GP_ANDV
Andes orthohantavirus (ANDV) (Andes virus) reference strain

Envelopment polyprotein (Glycoprotein precursor) (M polyprotein)

GP_HANTV
Hantaan virus (strain 76-118) (Korean hemorrhagic fever virus) reference strain

Envelopment polyprotein (Glycoprotein precursor) (M polyprotein)

GP_SINV
Sin Nombre orthohantavirus (SNV) (Sin Nombre virus) reference strain
GP_TULV
Tula orthohantavirus (TULV) (Tula virus) reference strain

Envelopment polyprotein (Glycoprotein precursor) (M polyprotein)

GP_BCCV
Black Creek Canal orthohantavirus (BCCV) (Black Creek Canal virus)

Envelopment polyprotein (Glycoprotein precursor) (M polyprotein)

GP_DOBV
Dobrava-Belgrade orthohantavirus (DOBV) (Dobrava virus)

Envelopment polyprotein (Glycoprotein precursor) (M polyprotein)

GP_HANTB
Hantaan virus (strain B-1) (Korean hemorrhagic fever virus)
GP_HANTH
Hantaan virus (strain Hojo) (Hojo virus) (Korean hemorrhagic fever virus)
GP_HANTL
Hantaan virus (strain Lee) (Lee virus) (Korean hemorrhagic fever virus)
GP_NYV
New York virus (NYV)
GP_PHV
Prospect Hill virus (PHV)
GP_PUUMG
Puumala virus (strain Bank vole/Russia/CG1820/1984)
GP_PUUMK
Puumala virus (strain K27)
GP_PUUMP
Puumala virus (strain P360)
GP_PUUMS
Puumala virus (strain Sotkamo/V-2969/81)
GP_SEOU8
Seoul virus (strain 80-39)
GP_SEOUR
Seoul virus (strain R22)
GP_SEOUS
Seoul virus (strain SR-11) (Sapporo rat virus)

7 entries

E3 ubiquitin-protein ligase ICP0 (EC 2.3.2.27) (IER 2.9/ER2.6) (P135 protein) (RING-type E3 ubiquitin transferase ICP0)

Select_allDeselect_all
ICP0_EHV1B
Equine herpesvirus 1 (strain Ab4p) (EHV-1) (Equine abortion virus) reference strain

E3 ubiquitin-protein ligase ICP0 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ICP0)

ICP0_HHV11
Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain

E3 ubiquitin-protein ligase ICP0 (EC 2.3.2.27) (Alpha-0 protein) (Immediate-early protein IE110) (RING-type E3 ubiquitin transferase ICP0) (Trans-acting transcriptional protein ICP0) (VMW110)

ICP0_HHV2H
Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain

E3 ubiquitin-protein ligase ICP0 (EC 2.3.2.27) (RING-type E3 ubiquitin transferaseICP0) (VMW118 protein)

ICP0_BHV1J
Bovine herpesvirus 1.1 (strain Jura) (BoHV-1) (Infectious bovine rhinotracheitis virus)
ICP0_BHV1K
Bovine herpesvirus 1.2 (strain K22) (BoHV-1) (Infectious bovine rhinotracheitis virus)
ICP0_EHV1V
Equine herpesvirus 1 (strain V592) (EHV-1) (Equine abortion virus)

E3 ubiquitin-protein ligase ICP0 (EC 2.3.2.27) (Infected cell protein 0) (RING-type E3 ubiquitin transferase ICP0)

ICP0_SUHVF
Suid herpesvirus 1 (strain Indiana-Funkhauser / Becker) (SuHV-1) (Pseudorabies virus (strain Indiana-Funkhauser / Becker))

E3 ubiquitin-protein ligase ICP0 (EC 2.3.2.27) (Early protein 0) (EP0) (RING-type E3 ubiquitin transferase ICP0)

1 entry

mRNA export factor (Immediate-early protein IE63) (Infected cell protein 27) (ICP27) (VMW63)

ICP27_HHV2H
Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain

5 entries

Neurovirulence factor ICP34.5 (Infected cell protein 34.5) (protein gamma(1)34.5)

Select_allDeselect_all
ICP34_HHV11
Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain
ICP34_HHV2H
Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain
ICP34_HHV1D
Human herpesvirus 1 (strain CVG-2) (HHV-1) (Human herpes simplex virus 1)
ICP34_HHV1F
Human herpesvirus 1 (strain F) (HHV-1) (Human herpes simplex virus 1)
ICP34_HHV1N
Human herpesvirus 1 (strain MGH-10) (HHV-1) (Human herpes simplex virus 1)

1 entry

Inner tegument protein (EC 3.5.1.-) (EC 3.5.1.44) (Viral deamidase UL37)

ITP_HHV11
Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain

3 entries

Serine/threonine-protein kinase BGLF4 (EC 2.7.11.1)

Select_allDeselect_all
KR2_EBVA8
Epstein-Barr virus (strain AG876) (HHV-4) (Human herpesvirus 4) reference strain
KR2_EBVB9
Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4) reference strain
KR2_EBVG
Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)

5 entries

Latent membrane protein 1 (LMP-1) (Protein p63)

Select_allDeselect_all
LMP1_EBVA8
Epstein-Barr virus (strain AG876) (HHV-4) (Human herpesvirus 4) reference strain
LMP1_EBVB9
Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4) reference strain
LMP1_EBVC
Epstein-Barr virus (strain Cao) (HHV-4) (Human herpesvirus 4)
LMP1_EBVG
Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4)
LMP1_EBVR
Epstein-Barr virus (strain Raji) (HHV-4) (Human herpesvirus 4)

5 entries

Minor capsid protein M1249L (pM1249L)

Select_allDeselect_all
M1249_ASFB7
African swine fever virus (strain Badajoz 1971 Vero-adapted) (Ba71V) (ASFV) reference strain
M1249_ASFK5
African swine fever virus (isolate Pig/Kenya/KEN-50/1950) (ASFV)
M1249_ASFM2
African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) (ASFV)
M1249_ASFP4
African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) (ASFV)
M1249_ASFWA
African swine fever virus (isolate Warthog/Namibia/Wart80/1980) (ASFV)

1 entry

Protein M2-2

M22_HMPVC
Human metapneumovirus (strain CAN97-83) (HMPV) reference strain

1 entry

Protein ML (ML)

ML_THOGV
Thogoto virus (isolate SiAr 126) (Tho) reference strain

33 entries

Nucleoprotein (EC 3.1.13.-) (Nucleocapsid protein) (Protein N)

Select_allDeselect_all
NCAP_ANDV
Andes orthohantavirus (ANDV) (Andes virus) reference strain

Nucleoprotein (EC 3.1.-.-) (Nucleocapsid protein) (Protein N)

NCAP_BCNVU
Bear Canyon mammarenavirus (isolate Mouse/United States/AV A0070039/2000) (BCNV) reference strain
NCAP_BRSVA
Bovine respiratory syncytial virus (strain A51908) (BRS) reference strain

Nucleoprotein (Protein N) (Nucleocapsid protein)

NCAP_GOGV
Alethinophid 1 reptarenavirus (isolate AlRrV1/Boa/USA/BC/2009) (Golden Gate virus) reference strain

Nucleoprotein (Nucleocapsid protein) (Protein N)

NCAP_HRSVB
Human respiratory syncytial virus B (strain B1) reference strain

Nucleoprotein (Protein N) (Nucleocapsid protein)

NCAP_LASSJ
Lassa virus (strain Mouse/Sierra Leone/Josiah/1976) (LASV) reference strain
NCAP_LATVB
Latino mammarenavirus (isolate Rat/Bolivia/MARU 1924/1965) (LATV) reference strain
NCAP_LYCVA
Lymphocytic choriomeningitis virus (strain Armstrong) (LCMV) reference strain
NCAP_PIARV
Pichinde mammarenavirus (PICV) (Pichind mammarenavirus) reference strain
NCAP_PRRSL
Porcine reproductive and respiratory syndrome virus (strain Lelystad) (PRRSV) reference strain

Nucleoprotein (Nucleocapsid protein) (Protein N)

NCAP_SABVB
Sabia mammarenavirus (isolate Human/Brasil/SPH114202/1990) (SABV) (Sabi mammarenavirus) reference strain
NCAP_TACVF
Tacaribe virus (strain Franze-Fernandez) (TCRV) reference strain
NCAP_TAMVU
Tamiami mammarenavirus (isolate Rat/United States/W 10777/1964) (TAMV) reference strain
NCAP_WWAVU
Whitewater Arroyo mammarenavirus (isolate Rat/United States/AV 9310135/1995) (WWAV) reference strain
NCAP_ALLVP
Allpahuayo mammarenavirus (isolate Rat/Peru/CLHP-2472/1997) (ALLV)
NCAP_BRSV3
Bovine respiratory syncytial virus (strain 391-2) (BRS)

Nucleoprotein (Protein N) (Nucleocapsid protein)

NCAP_BRSVR
Bovine respiratory syncytial virus (strain Rb94) (BRS)

Nucleoprotein (Protein N) (Nucleocapsid protein)

NCAP_CHAVB
Chapare mammarenavirus (isolate Human/Bolivia/810419/2003)
NCAP_CPXVB
Cupixi mammarenavirus (isolate Rat/Brasil/BeAn 119303/1970) (CPXV)
NCAP_GTOVV
Guanarito mammarenavirus (isolate Human/Venezuela/NH-95551/1990) (GTOV)
NCAP_HRSV
Human respiratory syncytial virus

Nucleoprotein (Protein N) (Nucleocapsid protein)

NCAP_HRSV1
Human respiratory syncytial virus B (strain 18537)

Nucleoprotein (Protein N) (Nucleocapsid protein)

NCAP_HRSVA
Human respiratory syncytial virus A (strain A2)

Nucleoprotein (Protein N) (Nucleocapsid protein)

NCAP_IPPYV
Ippy mammarenavirus (isolate Rat/Central African Republic/Dak An B 188 d/1970) (IPPYV)
NCAP_JUNIN
Junin mammarenavirus (JUNV) (Junn mammarenavirus)
NCAP_LASSG
Lassa virus (strain GA391) (LASV)
NCAP_LYCVW
Lymphocytic choriomeningitis virus (strain WE) (LCMV)
NCAP_MACHU
Machupo virus (MACV)
NCAP_MOBVC
Mobala mammarenavirus (isolate Rat/Central African Republic/Acar 3080/1983) (MOBV)
NCAP_MOPEI
Mopeia virus (MOPV)
NCAP_OLVVA
Oliveros mammarenavirus (isolate Mouse/Argentina/RIID 3229/1990) (OLVV)
NCAP_PARVP
Parana mammarenavirus (isolate Rat/Paraguay/12056/1965) (PARV) (Paran mammarenavirus)
NCAP_PIRVV
Pirital mammarenavirus (isolate Rat/Venezuela/VAV-488/1995) (PIRV)

129 entries

Non-structural protein 1 (NS1) (NS1A)

Select_allDeselect_all
NS1_BRSVA
Bovine respiratory syncytial virus (strain A51908) (BRS) reference strain

Non-structural protein 1 (Non-structural protein 1C)

NS1_HRSVB
Human respiratory syncytial virus B (strain B1) reference strain

Non-structural protein 1 (Non-structural protein 1C)

NS1_I33A0
Influenza A virus (strain A/Wilson-Smith/1933 H1N1) (Influenza A virus (strain A/WS/1933 H1N1)) reference strain
NS1_I34A1
Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) reference strain
NS1_I56A1
Influenza A virus (strain A/Duck/Czechoslovakia/1956 H4N6) reference strain
NS1_I56A2
Influenza A virus (strain A/Duck/England/1/1956 H11N6) reference strain
NS1_I78A3
Influenza A virus (strain A/Mallard/New York/6750/1978 H2N2) reference strain
NS1_I96A0
Influenza A virus (strain A/Goose/Guangdong/1/1996 H5N1 genotype Gs/Gd) reference strain
NS1_INCAA
Influenza C virus (strain C/Ann Arbor/1/1950) reference strain
NS1_HRSS2
Human respiratory syncytial virus A (strain S-2) (HRSV-S2)

Non-structural protein 1 (NS1) (Non-structural protein 1C)

NS1_HRSV
Human respiratory syncytial virus

Non-structural protein 1 (Non-structural protein 1C)

NS1_HRSV1
Human respiratory syncytial virus B (strain 18537)

Non-structural protein 1 (Non-structural protein 1C)

NS1_HRSVA
Human respiratory syncytial virus A (strain A2)

Non-structural protein 1 (NS1) (Non-structural protein 1C)

NS1_I000W
Influenza A virus (strain A/Wa-182)
NS1_I000X
Influenza A virus (strain A/X-31 H3N2)
NS1_I00A0
Influenza A virus (strain A/Duck/Hong Kong/2986.1/2000 H5N1 genotype C)
NS1_I00A1
Influenza A virus (strain A/New Zealand:South Canterbury/35/2000 H1N1)
NS1_I01A0
Influenza A virus (strain A/Silky Chicken/Hong Kong/SF189/2001 H5N1 genotype A)
NS1_I01A1
Influenza A virus (strain A/Chicken/Hong Kong/YU562/2001 H5N1 genotype B)
NS1_I01A2
Influenza A virus (strain A/Chicken/Hong Kong/FY150/2001 H5N1 genotype D)
NS1_I01A3
Influenza A virus (strain A/Chicken/Hong Kong/715.5/2001 H5N1 genotype E)
NS1_I02A0
Influenza A virus (strain A/Chicken/Brescia/1902 H7N7)
NS1_I02A1
Influenza A virus (strain A/Guinea fowl/Hong Kong/38/2002 H5N1 genotype X0)
NS1_I02A2
Influenza A virus (strain A/Chicken/Hong Kong/31.2/2002 H5N1 genotype X1)
NS1_I02A3
Influenza A virus (strain A/Chicken/Hong Kong/37.4/2002 H5N1 genotype X2)
NS1_I02A4
Influenza A virus (strain A/Silky Chicken/Hong Kong/YU100/2002 H5N1 genotype X3)
NS1_I02A5
Influenza A virus (strain A/Chicken/Hong Kong/96.1/2002 H5N1 genotype Y)
NS1_I02A6
Influenza A virus (strain A/Chicken/Hong Kong/YU22/2002 H5N1 genotype Z)
NS1_I03A0
Influenza A virus (strain A/Hong Kong/212/2003 H5N1 genotype Z+)
NS1_I03A1
Influenza A virus (strain A/Chicken/Shantou/4231/2003 H5N1 genotype V)
NS1_I06A0
Influenza A virus (strain A/Russia:St.Petersburg/8/2006 H1N1)
NS1_I07A0
Influenza A virus (strain A/USA:Texas/UR06-0195/2007 H1N1)
NS1_I18A0
Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) (Influenza A virus (strain A/South Carolina/1/1918 H1N1))
NS1_I30A0
Influenza A virus (strain A/Swine/Iowa/15/1930 H1N1)
NS1_I34A0
Influenza A virus (strain A/Fowl plague virus/Rostock/8/1934 H7N1)
NS1_I35A3
Influenza A virus (strain A/USA:Phila/1935 H1N1)
NS1_I36A0
Influenza A virus (strain A/Henry/1936 H1N1)
NS1_I40A0
Influenza A virus (strain A/Hickox/1940 H1N1)
NS1_I43A0
Influenza A virus (strain A/USA:Iowa/1943 H1N1)
NS1_I45A0
Influenza A virus (strain A/USA:Huston/AA/1945 H1N1)
NS1_I47A0
Influenza A virus (strain A/Fort Monmouth/1/1947 H1N1)
NS1_I49A0
Influenza A virus (strain A/Chicken/Germany/n/1949 H10N7)
NS1_I49A1
Influenza A virus (strain A/Duck/Germany/1949 H10N7)
NS1_I50A0
Influenza A virus (strain A/Fort Warren/1/1950 H1N1)
NS1_I51A0
Influenza A virus (strain A/USA:Albany/12/1951 H1N1)
NS1_I54A0
Influenza A virus (strain A/Leningrad/1/1954 H1N1)
NS1_I54A2
Influenza A virus (strain A/Malaysia:Malaya/302/1954 H1N1)
NS1_I56A3
Influenza A virus (strain A/Equine/Prague/1/1956 H7N7)
NS1_I57A0
Influenza A virus (strain A/Japan/305/1957 H2N2)
NS1_I57A1
Influenza A virus (strain A/Leningrad/134/1957 H2N2)
NS1_I57A2
Influenza A virus (strain A/Leningrad/134/17/1957 H2N2)
NS1_I57A3
Influenza A virus (strain A/Leningrad/134/47/1957 H2N2)
NS1_I57A5
Influenza A virus (strain A/Singapore/1/1957 H2N2)
NS1_I59A0
Influenza A virus (strain A/Chicken/Scotland/1959 H5N1)
NS1_I60A0
Influenza A virus (strain A/Ann Arbor/6/1960 H2N2)
NS1_I61A1
Influenza A virus (strain A/Swine/Wisconsin/1/1961 H1N1)
NS1_I63A1
Influenza A virus (strain A/Turkey/Canada/1963 H6N8)
NS1_I66A0
Influenza A virus (strain A/Turkey/Ontario/7732/1966 H5N9)
NS1_I66A1
Influenza A virus (strain A/Turkey/Wisconsin/1/1966 H9N2)
NS1_I67A0
Influenza A virus (strain A/Tokyo/3/1967 H2N2)
NS1_I68A0
Influenza A virus (strain A/Aichi/2/1968 H3N2)
NS1_I68A3
Influenza A virus (strain A/Turkey/Ontario/6118/1968 H8N4)
NS1_I68A4
Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
NS1_I68A5
Influenza A virus (strain A/Korea/426/1968 H2N2)
NS1_I69A0
Influenza A virus (strain A/England/878/1969 H3N2)
NS1_I70A0
Influenza A virus (strain A/Qu/7/1970 H3N2)
NS1_I71A1
Influenza A virus (strain A/Memphis/1/1971 H3N2)
NS1_I71A2
Influenza A virus (strain A/Turkey/Oregon/1971 H7N3)
NS1_I72A2
Influenza A virus (strain A/Udorn/307/1972 H3N2)
NS1_I72A3
Influenza A virus (strain A/Memphis/102/1972 H3N2)
NS1_I72A4
Influenza A virus (strain A/Memphis/101/1972 H3N2)
NS1_I72A5
Influenza A virus (strain A/Shearwater/Australia/1972 H6N5)
NS1_I72A6
Influenza A virus (strain A/Tern/Turkmenia/18/1972 H3N3)
NS1_I73A4
Influenza A virus (strain A/Equine/London/1416/1973 H7N7)
NS1_I73A5
Influenza A virus (strain A/Port Chalmers/1/1973 H3N2)
NS1_I75A0
Influenza A virus (strain A/Beijing/39/1975 H3N2)
NS1_I76A0
Influenza A virus (strain A/Anas acuta/Primorje/695/1976 H2N3)
NS1_I76A2
Influenza A virus (strain A/Duck/Alberta/60/1976 H12N5)
NS1_I76A5
Influenza A virus (strain A/Mallard/Alberta/88/1976 H3N8)
NS1_I76A6
Influenza A virus (strain A/Memphis/110/1976 H3N2)
NS1_I77A0
Influenza A virus (strain A/Alaska/6/1977 H3N2)
NS1_I77A4
Influenza A virus (strain A/Swine/Colorado/1/1977 H3N2)
NS1_I77A9
Influenza A virus (strain A/Equine/New Market/1/1977 H7N7)
NS1_I77AA
Influenza A virus (strain A/Brazil/11/1978 H1N1)
NS1_I77AB
Influenza A virus (strain A/USSR/90/1977 H1N1)
NS1_I77AF
Influenza A virus (strain A/Gull/Maryland/704/1977 H13N6)
NS1_I77AG
Influenza A virus (strain A/Budgerigar/Hokkaido/1/1977 H4N6)
NS1_I78A1
Influenza A virus (strain A/Mallard/Alberta/827/1978 H8N4)
NS1_I78A4
Influenza A virus (strain A/Mallard/New York/6874/1978 H3N2)
NS1_I78A7
Influenza A virus (strain A/Memphis/2/1978 H3N2)
NS1_I78A8
Influenza A virus (strain A/Memphis/18/1978 H3N2)
NS1_I78AA
Influenza A virus (strain A/Pintail/Alberta/268/1978 H6N2)
NS1_I78AC
Influenza A virus (strain A/Turkey/Minnesota/501/1978 H6N8)
NS1_I78AF
Influenza A virus (strain A/Gull/Maryland/1824/1978 H13N6)
NS1_I79A1
Influenza A virus (strain A/Pintail/Alberta/119/1979 H4N6)
NS1_I79A2
Influenza A virus (strain A/Pintail/Alberta/121/1979 H7N8)
NS1_I79A3
Influenza A virus (strain A/Pintail/Alberta/358/1979 H3N6)
NS1_I79A7
Influenza A virus (strain A/Grey teal/Australia/2/1979 H4N4)
NS1_I80A2
Influenza A virus (strain A/Seal/Massachusetts/1/1980 H7N7)
NS1_I80A4
Influenza A virus (strain A/Memphis/4/1980 H3N2)
NS1_I80A6
Influenza A virus (strain A/Duck/Hokkaido/8/1980 H3N8)
NS1_I80A8
Influenza A virus (strain A/Turkey/Minnesota/833/1980 H4N2)
NS1_I80AA
Influenza A virus (strain A/India/6263/1980 H1N1)
NS1_I80AC
Influenza A virus (strain A/Gull/Massachusetts/26/1980 H13N6)
NS1_I80AD
Influenza A virus (strain A/Gull/Minnesota/945/1980 H13N6)
NS1_I82A3
Influenza A virus (strain A/Seal/Massachusetts/133/1982 H4N5)
NS1_I82A8
Influenza A virus (strain A/Turkey/Bethlehem-Glilit/1492-B/1982 H1N1)
NS1_I83A1
Influenza A virus (strain A/Chile/1/1983 H1N1)
NS1_I83A4
Influenza A virus (strain A/Turkey/Ireland/1378/1983 H5N8)
NS1_I83A5
Influenza A virus (strain A/Chicken/Pennsylvania/1/1983 H5N2)
NS1_I83A6
Influenza A virus (strain A/Chicken/Pennsylvania/1370/1983 H5N2)
NS1_I83A8
Influenza A virus (strain A/Hong Kong/5/1983 H3N2)
NS1_I84A2
Influenza A virus (strain A/Whale/Maine/328/1984 H13N2)
NS1_I85A3
Influenza A virus (strain A/Chicken/Victoria/1/1985 H7N7)
NS1_I85A7
Influenza A virus (strain A/Ruddy Turnstone/New Jersey/47/1985 H4N6)
NS1_I86A3
Influenza A virus (strain A/Equine/Tennessee/5/1986 H3N8)
NS1_I87A1
Influenza A virus (strain A/Mallard/Ohio/556/1987 H5N9)
NS1_I88A4
Influenza A virus (strain A/Herring gull/DE/677/1988 H2N8)
NS1_I89A1
Influenza A virus (strain A/Beijing/352/1989 H3N2)
NS1_I89A7
Influenza A virus (strain A/Equine/Jillin/1/1989 H3N8)
NS1_I91A0
Influenza A virus (strain A/Equine/Alaska/1/1991 H3N8)
NS1_I96A2
Influenza A virus (strain A/USA:Memphis/10/1996 H1N1)
NS1_I96A3
Influenza A virus (strain A/China:Nanchang/11/1996 H1N1)
NS1_I97A0
Influenza A virus (strain A/Chicken/Hong Kong/220/1997 H5N1 genotype Gs/Gd)
NS1_I97A1
Influenza A virus (strain A/Hong Kong/156/1997 H5N1 genotype Gs/Gd)
NS1_INCCA
Influenza C virus (strain C/California/1978)
NS1_INCHY
Influenza C virus (strain C/Hyogo/1/1983)
NS1_INCY6
Influenza C virus (strain C/Yamagata/1964)
NS1_ORSVW
Ovine respiratory syncytial virus (strain WSU 83-1578) (ORSV)

Non-structural protein 1 (Non-structural protein 1C)

7 entries

Non-structural protein 2 (NS2) (Non-structural protein 1B)

Select_allDeselect_all
NS2_BRSVA
Bovine respiratory syncytial virus (strain A51908) (BRS) reference strain
NS2_HRSVB
Human respiratory syncytial virus B (strain B1) reference strain
NS2_MPV15
Murine pneumonia virus (strain 15) (MPV) reference strain
NS2_HRSV
Human respiratory syncytial virus
NS2_HRSV1
Human respiratory syncytial virus B (strain 18537)
NS2_HRSVA
Human respiratory syncytial virus A (strain A2)
NS2_ORSVW
Ovine respiratory syncytial virus (strain WSU 83-1578) (ORSV)

41 entries

Non-structural protein 1 (NSP1) (NCVP2) (Non-structural RNA-binding protein 53) (NS53)

Select_allDeselect_all
NSP1_ROTHC
Rotavirus C (isolate RVC/Human/United Kingdom/Bristol/1989) (RV-C) reference strain
NSP1_ROTS1
Rotavirus A (strain RVA/SA11-Both/G3P5B[2]) (RV-A) (Simian Agent 11 (strain Both)) reference strain
NSP1_ROTSH
Rotavirus A (isolate RVA/Monkey/South Africa/SA11-H96/1958/G3P5B[2]) (RV-A) (Simian Agent 11 (isolate SI/South Africa/H96/58)) reference strain
NSP1_ROT41
Rotavirus A (isolate RVA/Human/Belgium/B4106/2000/G3P11[14]) (RV-A) (Rotavirus A (isolate B4106))
NSP1_ROTAD
Rotavirus A (strain RVA/Human/United States/D/1974/G1P1A[8]) (RV-A)
NSP1_ROTAP
Rotavirus A (isolate RVA/Cow/South/Africa/Offal agent/1965/G8P6[1]) (RV-A)
NSP1_ROTB4
Rotavirus A (strain RVA/Cow/United States/B641/XXXX/G6P7[5]) (RV-A)
NSP1_ROTBA
Rotavirus A (isolate RVA/Cow/Thailand/A44/1988/G10P8[11]) (RV-A)
NSP1_ROTBB
Rotavirus A (isolate RVA/Cow/United States/B223/1983/G10P8[11]) (RV-A)
NSP1_ROTBU
Rotavirus A (strain RVA/Cow/United Kingdom/UK/1975/G6P7[5]) (RV-A)
NSP1_ROTD9
Rotavirus A (isolate RVA/Dog/United States/K9/1981/G3P5A[3]) (RV-A)
NSP1_ROTEH
Rotavirus A (isolate RVA/Equine/United Kingdom/H2/1976/G3P4[12]) (RV-A) (Rotavirus A (isolate H-2))
NSP1_ROTEL
Rotavirus A (isolate RVA/Equine/United Kingdom/L338/1988/G13P12[18]) (RV-A)
NSP1_ROTF6
Rotavirus A (isolate RVA/Cat/Japan/FRV64/1989/G3P5B[3]) (RV-A)
NSP1_ROTH3
Rotavirus A (strain RVA/Human/Japan/AU-1/1982/G3P3[9]) (RV-A)
NSP1_ROTH6
Rotavirus A (strain RVA/Human/Indonesia/69M/1980/G8P4[10]) (RV-A)
NSP1_ROTH7
Rotavirus A (isolate RVA/Human/United Kingdom/A64/1987/G10P11[14]) (RV-A)
NSP1_ROTHD
Rotavirus A (strain RVA/Human/United States/DS-1/1976/G2P1B[4]) (RV-A) (Rotavirus A (strain DS1))
NSP1_ROTHI
Rotavirus A (isolate RVA/Human/Japan/IGV-80-3/XXXX/GXP[X]) (RV-A)
NSP1_ROTHJ
Rotavirus A (strain RVA/Human/Japan/K8/1977/G1P3A[9]) (RV-A)
NSP1_ROTHK
Rotavirus A (strain RVA/Human/Japan/KU/1995/G1P1A[8]) (RV-A)
NSP1_ROTHL
Rotavirus A (strain RVA/Human/Philippines/L26/1987/G12P1B[4]) (RV-A)
NSP1_ROTHM
Rotavirus A (strain RVA/Human/Venezuela/M37/1982/G1P2A[6]) (RV-A)
NSP1_ROTHP
Rotavirus A (strain RVA/Human/United States/P/1974/G3P1A[8]) (RV-A)
NSP1_ROTHT
Rotavirus A (strain RVA/Human/United Kingdom/ST3/1975/G4P2A[6]) (RV-A) (Rotavirus A (strain St. Thomas 3))
NSP1_ROTHU
Rotavirus A (isolate RVA/Human/India/116E/1986/G9P8[11]) (RV-A)
NSP1_ROTHW
Rotavirus A (strain RVA/Human/United States/Wa/1974/G1P1A[8]) (RV-A)
NSP1_ROTME
Rotavirus A (isolate RVA/Mouse/Brazil/EHP/1981/G16P[20]) (RV-A)
NSP1_ROTP5
Rotavirus A (strain RVA/Pig/United States/OSU/1977/G5P9[7]) (RV-A) (Rotavirus A (strain Ohio State University))
NSP1_ROTPC
Rotavirus C (strain RVC/Pig/United States/Cowden/1980) (RV-C)
NSP1_ROTPG
Rotavirus A (strain RVA/Pig/United States/Gottfried/1983/G4P2B[6]) (RV-A)
NSP1_ROTPY
Rotavirus A (strain RVA/Pig/Mexico/YM/1983/G11P9[7]) (RV-A)
NSP1_ROTRA
Rotavirus A (strain RVA/Rabbit/United States/ALA/XXXX/G3P11[14]) (RV-A) (Rotavirus A (strain Alabama))
NSP1_ROTRF
Rotavirus A (strain RVA/Cow/France/RF/1975/G6P6[1]) (RV-A)
NSP1_ROTRH
Rotavirus A (strain RVA/Monkey/United States/RRV/1975/G3P5B[3]) (RV-A)
NSP1_ROTS4
Rotavirus A (strain RVA/SA11-4F/G3P6[1]) (RV-A) (Simian Agent 11 (strain 4F))
NSP1_ROTSF
Rotavirus A (strain RVA/SA11-FEM/G3P6[1]) (RV-A) (Simian Agent 11 (strain FEM))
NSP1_ROTSP
Rotavirus A (strain RVA/SA11-Patton/G3P[X]) (RV-A) (Simian Agent 11 (strain Patton))
NSP1_ROTTU
Rotavirus A (isolate RVA/Monkey/United States/TUCH/2003/G3P[24]) (RV-A)
NSP1_ROTW3
Rotavirus A (strain RVA/Cow/United States/WC3/1981/G6P7[5]) (RV-A) (Rotavirus (strain Wistar calf 3))
NSP1_ROTWI
Rotavirus A (isolate RVA/Human/United States/WI61/1983/G9P1A[8]) (RV-A)

8 entries

Non-structural protein NS-S (NSs)

Select_allDeselect_all
NSS_HTRV
Heartland virus (HTRV) reference strain
NSS_SFTSV
SFTS phlebovirus (isolate SFTSV/Human/China/HB29/2010) (Severe fever with thrombocytopenia virus) reference strain
NSS_TULV
Tula orthohantavirus (TULV) (Tula virus) reference strain
NSS_UUKS
Uukuniemi virus (strain S23) (UUKV) reference strain
NSS_ANDV
Andes orthohantavirus (ANDV) (Andes virus)
NSS_PUUMG
Puumala virus (strain Bank vole/Russia/CG1820/1984)
NSS_PUUMS
Puumala virus (strain Sotkamo/V-2969/81)
NSS_TOSV
Toscana virus (Tos)

1 entry

Protein ORF3 (pORF3) (Vp13)

ORF3_HEVCH
Hepatitis E virus genotype 1 (isolate Human/China/HeBei/1987) (HEV) reference strain

1 entry

Protein ORF45

ORF45_HHV8P
Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) reference strain

3 entries

Non-structural protein ORF4b (ORF4b)

Select_allDeselect_all
ORF4B_BCHK4
Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004) reference strain
ORF4B_BCHK5
Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004) reference strain
ORF4B_MERS1
Middle East respiratory syndrome-related coronavirus (isolate United Kingdom/H123990006/2012) (MERS-CoV) (Betacoronavirus England 1) reference strain

2 entries

ORF9b protein (Accessory protein 9b) (ORF-9b) (Protein 9b)

Select_allDeselect_all
ORF9B_SARS
Severe acute respiratory syndrome coronavirus (SARS-CoV) reference strain
ORF9B_SARS2
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2) reference strain

ORF9b protein (ORF9b) (Accessory protein 9b) (ORF-9b) (Protein 9b)

5 entries

Structural protein p14.5

Select_allDeselect_all
P14_ASFB7
African swine fever virus (strain Badajoz 1971 Vero-adapted) (Ba71V) (ASFV) reference strain

Protein p14.5 (pE120R)

P14_ASFK5
African swine fever virus (isolate Pig/Kenya/KEN-50/1950) (ASFV)

Protein p14.5 (pE120R)

P14_ASFM2
African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) (ASFV)
P14_ASFP4
African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) (ASFV)
P14_ASFWA
African swine fever virus (isolate Warthog/Namibia/Wart80/1980) (ASFV)

56 entries

Protein PB1-F2

Select_allDeselect_all
PB1F2_I34A1
Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) reference strain
PB1F2_I56A1
Influenza A virus (strain A/Duck/Czechoslovakia/1956 H4N6) reference strain
PB1F2_I56A2
Influenza A virus (strain A/Duck/England/1/1956 H11N6) reference strain
PB1F2_I96A0
Influenza A virus (strain A/Goose/Guangdong/1/1996 H5N1 genotype Gs/Gd) reference strain
PB1F2_I00A0
Influenza A virus (strain A/Duck/Hong Kong/2986.1/2000 H5N1 genotype C)
PB1F2_I01A0
Influenza A virus (strain A/Silky Chicken/Hong Kong/SF189/2001 H5N1 genotype A)
PB1F2_I01A1
Influenza A virus (strain A/Chicken/Hong Kong/YU562/2001 H5N1 genotype B)
PB1F2_I01A2
Influenza A virus (strain A/Chicken/Hong Kong/FY150/2001 H5N1 genotype D)
PB1F2_I01A3
Influenza A virus (strain A/Chicken/Hong Kong/715.5/2001 H5N1 genotype E)
PB1F2_I02A1
Influenza A virus (strain A/Guinea fowl/Hong Kong/38/2002 H5N1 genotype X0)
PB1F2_I02A2
Influenza A virus (strain A/Chicken/Hong Kong/31.2/2002 H5N1 genotype X1)
PB1F2_I02A3
Influenza A virus (strain A/Chicken/Hong Kong/37.4/2002 H5N1 genotype X2)
PB1F2_I02A4
Influenza A virus (strain A/Silky Chicken/Hong Kong/YU100/2002 H5N1 genotype X3)
PB1F2_I02A5
Influenza A virus (strain A/Chicken/Hong Kong/96.1/2002 H5N1 genotype Y)
PB1F2_I02A6
Influenza A virus (strain A/Chicken/Hong Kong/YU22/2002 H5N1 genotype Z)
PB1F2_I02A7
Influenza A virus (strain A/Teal/China/2978.1/2002 H5N1 genotype W)
PB1F2_I03A0
Influenza A virus (strain A/Hong Kong/212/2003 H5N1 genotype Z+)
PB1F2_I03A1
Influenza A virus (strain A/Chicken/Shantou/4231/2003 H5N1 genotype V)
PB1F2_I05A1
Influenza A virus (strain A/Goose/Guangxi/345/2005 H5N1 genotype G)
PB1F2_I06A0
Influenza A virus (strain A/Russia:St.Petersburg/8/2006 H1N1)
PB1F2_I18A0
Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) (Influenza A virus (strain A/South Carolina/1/1918 H1N1))
PB1F2_I33A0
Influenza A virus (strain A/Wilson-Smith/1933 H1N1) (Influenza A virus (strain A/WS/1933 H1N1))
PB1F2_I35A3
Influenza A virus (strain A/USA:Phila/1935 H1N1)
PB1F2_I36A0
Influenza A virus (strain A/Henry/1936 H1N1)
PB1F2_I40A0
Influenza A virus (strain A/Hickox/1940 H1N1)
PB1F2_I43A0
Influenza A virus (strain A/USA:Iowa/1943 H1N1)
PB1F2_I45A0
Influenza A virus (strain A/USA:Huston/AA/1945 H1N1)
PB1F2_I49A1
Influenza A virus (strain A/Duck/Germany/1949 H10N7)
PB1F2_I59A0
Influenza A virus (strain A/Chicken/Scotland/1959 H5N1)
PB1F2_I60A0
Influenza A virus (strain A/Ann Arbor/6/1960 H2N2)
PB1F2_I66A0
Influenza A virus (strain A/Turkey/Ontario/7732/1966 H5N9)
PB1F2_I66A1
Influenza A virus (strain A/Turkey/Wisconsin/1/1966 H9N2)
PB1F2_I68A3
Influenza A virus (strain A/Turkey/Ontario/6118/1968 H8N4)
PB1F2_I68A4
Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
PB1F2_I71A1
Influenza A virus (strain A/Memphis/1/1971 H3N2)
PB1F2_I72A3
Influenza A virus (strain A/Memphis/102/1972 H3N2)
PB1F2_I72A4
Influenza A virus (strain A/Memphis/101/1972 H3N2)
PB1F2_I73A5
Influenza A virus (strain A/Port Chalmers/1/1973 H3N2)
PB1F2_I75A0
Influenza A virus (strain A/Beijing/39/1975 H3N2)
PB1F2_I76A6
Influenza A virus (strain A/Memphis/110/1976 H3N2)
PB1F2_I77A4
Influenza A virus (strain A/Swine/Colorado/1/1977 H3N2)
PB1F2_I77AF
Influenza A virus (strain A/Gull/Maryland/704/1977 H13N6)
PB1F2_I78A7
Influenza A virus (strain A/Memphis/2/1978 H3N2)
PB1F2_I78A8
Influenza A virus (strain A/Memphis/18/1978 H3N2)
PB1F2_I78AC
Influenza A virus (strain A/Turkey/Minnesota/501/1978 H6N8)
PB1F2_I79A7
Influenza A virus (strain A/Grey teal/Australia/2/1979 H4N4)
PB1F2_I80A2
Influenza A virus (strain A/Seal/Massachusetts/1/1980 H7N7)
PB1F2_I80A4
Influenza A virus (strain A/Memphis/4/1980 H3N2)
PB1F2_I80A6
Influenza A virus (strain A/Duck/Hokkaido/8/1980 H3N8)
PB1F2_I80A8
Influenza A virus (strain A/Turkey/Minnesota/833/1980 H4N2)
PB1F2_I83A4
Influenza A virus (strain A/Turkey/Ireland/1378/1983 H5N8)
PB1F2_I83A5
Influenza A virus (strain A/Chicken/Pennsylvania/1/1983 H5N2)
PB1F2_I83A6
Influenza A virus (strain A/Chicken/Pennsylvania/1370/1983 H5N2)
PB1F2_I83A8
Influenza A virus (strain A/Hong Kong/5/1983 H3N2)
PB1F2_I85A3
Influenza A virus (strain A/Chicken/Victoria/1/1985 H7N7)
PB1F2_I97A1
Influenza A virus (strain A/Hong Kong/156/1997 H5N1 genotype Gs/Gd)

54 entries

Polymerase basic protein 2 (RNA-directed RNA polymerase subunit P3)

Select_allDeselect_all
PB2_I33A0
Influenza A virus (strain A/Wilson-Smith/1933 H1N1) (Influenza A virus (strain A/WS/1933 H1N1)) reference strain
PB2_I34A1
Influenza A virus (strain A/Puerto Rico/8/1934 H1N1) reference strain
PB2_I77AB
Influenza A virus (strain A/USSR/90/1977 H1N1) reference strain
PB2_I000X
Influenza A virus (strain A/X-31 H3N2)
PB2_I00A1
Influenza A virus (strain A/New Zealand:South Canterbury/35/2000 H1N1)
PB2_I06A0
Influenza A virus (strain A/Russia:St.Petersburg/8/2006 H1N1)
PB2_I07A0
Influenza A virus (strain A/USA:Texas/UR06-0195/2007 H1N1)
PB2_I18A0
Influenza A virus (strain A/Brevig Mission/1/1918 H1N1) (Influenza A virus (strain A/South Carolina/1/1918 H1N1))
PB2_I30A0
Influenza A virus (strain A/Swine/Iowa/15/1930 H1N1)
PB2_I35A3
Influenza A virus (strain A/USA:Phila/1935 H1N1)
PB2_I36A0
Influenza A virus (strain A/Henry/1936 H1N1)
PB2_I40A0
Influenza A virus (strain A/Hickox/1940 H1N1)
PB2_I43A0
Influenza A virus (strain A/USA:Iowa/1943 H1N1)
PB2_I45A0
Influenza A virus (strain A/USA:Huston/AA/1945 H1N1)
PB2_I47A0
Influenza A virus (strain A/Fort Monmouth/1/1947 H1N1)
PB2_I49A1
Influenza A virus (strain A/Duck/Germany/1949 H10N7)
PB2_I51A0
Influenza A virus (strain A/USA:Albany/12/1951 H1N1)
PB2_I54A2
Influenza A virus (strain A/Malaysia:Malaya/302/1954 H1N1)
PB2_I57A0
Influenza A virus (strain A/Japan/305/1957 H2N2)
PB2_I57A1
Influenza A virus (strain A/Leningrad/134/1957 H2N2)
PB2_I57A2
Influenza A virus (strain A/Leningrad/134/17/1957 H2N2)
PB2_I57A3
Influenza A virus (strain A/Leningrad/134/47/1957 H2N2)
PB2_I57A5
Influenza A virus (strain A/Singapore/1/1957 H2N2)
PB2_I60A0
Influenza A virus (strain A/Ann Arbor/6/1960 H2N2)
PB2_I61A1
Influenza A virus (strain A/Swine/Wisconsin/1/1961 H1N1)
PB2_I67A0
Influenza A virus (strain A/Tokyo/3/1967 H2N2)
PB2_I67A2
Influenza A virus (strain A/Swine/Wisconsin/1/1967 H1N1)
PB2_I68A4
Influenza A virus (strain A/Hong Kong/1/1968 H3N2)
PB2_I68A5
Influenza A virus (strain A/Korea/426/1968 H2N2)
PB2_I68A6
Influenza A virus (strain A/Northern Territory/60/1968 H3N2) (Influenza A virus (strain NT60)) (Influenza A virus (strain A/NT/60/1968 H3N2))
PB2_I69A0
Influenza A virus (strain A/England/878/1969 H3N2)
PB2_I70A0
Influenza A virus (strain A/Qu/7/1970 H3N2)
PB2_I71A1
Influenza A virus (strain A/Memphis/1/1971 H3N2)
PB2_I72A2
Influenza A virus (strain A/Udorn/307/1972 H3N2)
PB2_I72A3
Influenza A virus (strain A/Memphis/102/1972 H3N2)
PB2_I72A4
Influenza A virus (strain A/Memphis/101/1972 H3N2)
PB2_I73A5
Influenza A virus (strain A/Port Chalmers/1/1973 H3N2)
PB2_I75A0
Influenza A virus (strain A/Beijing/39/1975 H3N2)
PB2_I75A3
Influenza A virus (strain A/Victoria/3/1975 H3N2)
PB2_I76A6
Influenza A virus (strain A/Memphis/110/1976 H3N2)
PB2_I77A4
Influenza A virus (strain A/Swine/Colorado/1/1977 H3N2)
PB2_I77AA
Influenza A virus (strain A/Brazil/11/1978 H1N1)
PB2_I77AC
Influenza A virus (strain A/Swine/Tennessee/24/1977 H1N1)
PB2_I78A7
Influenza A virus (strain A/Memphis/2/1978 H3N2)
PB2_I78A8
Influenza A virus (strain A/Memphis/18/1978 H3N2)
PB2_I79A4
Influenza A virus (strain A/Kiev/59/1979 H1N1)
PB2_I80A4
Influenza A virus (strain A/Memphis/4/1980 H3N2)
PB2_I80AA
Influenza A virus (strain A/India/6263/1980 H1N1)
PB2_I83A1
Influenza A virus (strain A/Chile/1/1983 H1N1)
PB2_I83A8
Influenza A virus (strain A/Hong Kong/5/1983 H3N2)
PB2_I88A3
Influenza A virus (strain A/Memphis/8/1988 H3N2)
PB2_I93A0
Influenza A virus (strain A/Kitakyushu/159/1993 H3N2)
PB2_I96A2
Influenza A virus (strain A/USA:Memphis/10/1996 H1N1)
PB2_I96A3
Influenza A virus (strain A/China:Nanchang/11/1996 H1N1)

5 entries

Protein OPG036 (Protein N2)

Select_allDeselect_all
PG036_MONPV
Monkeypox virus reference strain

Protein OPG036

PG036_VACCC
Vaccinia virus (strain Copenhagen) (VACV) reference strain
PG036_VACCW
Vaccinia virus (strain Western Reserve) (VACV) (Vaccinia virus (strain WR)) reference strain
PG036_VAR67
Variola virus (isolate Human/India/Ind3/1967) (VARV) (Smallpox virus) reference strain
PG036_VARV
Variola virus

4 entries

Protein K7

Select_allDeselect_all
PG044_MONPV
Monkeypox virus reference strain
PG044_VACCC
Vaccinia virus (strain Copenhagen) (VACV) reference strain
PG044_VACCW
Vaccinia virus (strain Western Reserve) (VACV) (Vaccinia virus (strain WR)) reference strain
PG044_VACCA
Vaccinia virus (strain Ankara) (VACV)

4 entries

RNA-binding protein OPG065 (RNA-binding protein E3) (p25)

Select_allDeselect_all
PG065_MONPV
Monkeypox virus reference strain

RNA-binding protein OPG065

PG065_VACCC
Vaccinia virus (strain Copenhagen) (VACV) reference strain
PG065_VACCW
Vaccinia virus (strain Western Reserve) (VACV) (Vaccinia virus (strain WR)) reference strain
PG065_VAR67
Variola virus (isolate Human/India/Ind3/1967) (VARV) (Smallpox virus) reference strain

RNA-binding protein OPG065 (Protein E3)

5 entries

Protein OPG067 (Protein E5)

Select_allDeselect_all
PG067_VACCC
Vaccinia virus (strain Copenhagen) (VACV) reference strain
PG067_VACCW
Vaccinia virus (strain Western Reserve) (VACV) (Vaccinia virus (strain WR)) reference strain
PG067_VACCD
Vaccinia virus (strain Dairen I) (VACV)
PG067_VAR67
Variola virus (isolate Human/India/Ind3/1967) (VARV) (Smallpox virus)
PG067_VARV
Variola virus

4 entries

Protein OPG176

Select_allDeselect_all
PG176_MONPV
Monkeypox virus reference strain
PG176_VACCC
Vaccinia virus (strain Copenhagen) (VACV) reference strain
PG176_VACCW
Vaccinia virus (strain Western Reserve) (VACV) (Vaccinia virus (strain WR)) reference strain
PG176_VAR67
Variola virus (isolate Human/India/Ind3/1967) (VARV) (Smallpox virus) reference strain

2 entries

Phosphoprotein (P protein) (p23) (p24)

Select_allDeselect_all
PHOSP_BDV1
Borna disease virus 1 (BoDV-1) reference strain
PHOSP_BDVV
Borna disease virus (strain V) (BDV) reference strain

121 entries

Genome polyprotein

Select_allDeselect_all
POLG_BVDVN
Bovine viral diarrhea virus (isolate NADL) (BVDV) (Mucosal disease virus) reference strain
POLG_DEN1W
Dengue virus type 1 (strain Nauru/West Pac/1974) (DENV-1) reference strain
POLG_EMCVR
Encephalomyocarditis virus (strain Rueckert) (EMCV) reference strain
POLG_HAVHM
Human hepatitis A virus genotype IB (isolate HM175) (HHAV) (Human hepatitis A virus (isolate Human/Australia/HM175/1976)) reference strain
POLG_HCV77
Hepatitis C virus genotype 1a (isolate H77) (HCV) reference strain
POLG_HRV8A
Human rhinovirus A serotype 89 (strain 41467-Gallo) (HRV-89) reference strain
POLG_SVV1
Seneca Valley virus (isolate -/United States/SSV-001/2002) (SVV) reference strain
POLG_BOVEV
Bovine enterovirus (strain VG-5-27) (BEV)
POLG_BVDVC
Bovine viral diarrhea virus (strain CP7) (BVDV) (Mucosal disease virus)
POLG_BVDVS
Bovine viral diarrhea virus (strain SD-1) (BVDV) (Mucosal disease virus)
POLG_CSFVA
Classical swine fever virus (strain Alfort) (CSFV) (Hog cholera virus)
POLG_CSFVB
Classical swine fever virus (strain Brescia) (CSFV) (Hog cholera virus)
POLG_CX16G
Coxsackievirus A16 (strain G-10)
POLG_CX16T
Coxsackievirus A16 (strain Tainan/5079/98)
POLG_CXA21
Coxsackievirus A21 (strain Coe)
POLG_CXA24
Coxsackievirus A24 (strain EH24/70)
POLG_CXA9
Coxsackievirus A9 (strain Griggs)
POLG_CXB1J
Coxsackievirus B1 (strain Japan)
POLG_CXB2O
Coxsackievirus B2 (strain Ohio-1)
POLG_CXB3N
Coxsackievirus B3 (strain Nancy)
POLG_CXB3W
Coxsackievirus B3 (strain Woodruff)
POLG_CXB4E
Coxsackievirus B4 (strain E2)
POLG_CXB4J
Coxsackievirus B4 (strain JVB / Benschoten / New York/51)
POLG_CXB5P
Coxsackievirus B5 (strain Peterborough / 1954/UK/85)
POLG_CXB6S
Coxsackievirus B6 (strain Schmitt)
POLG_DEN1B
Dengue virus type 1 (strain Brazil/97-11/1997) (DENV-1)
POLG_DEN1S
Dengue virus type 1 (strain Singapore/S275/1990) (DENV-1)
POLG_DEN26
Dengue virus type 2 (strain Thailand/16681/1984) (DENV-2)
POLG_DEN27
Dengue virus type 2 (strain 16681-PDK53) (DENV-2)
POLG_DEN28
Dengue virus type 2 (isolate Thailand/0168/1979) (DENV-2)
POLG_DEN2J
Dengue virus type 2 (strain Jamaica/1409/1983) (DENV-2)
POLG_DEN2N
Dengue virus type 2 (strain Thailand/NGS-C/1944) (DENV-2)
POLG_DEN2P
Dengue virus type 2 (strain Puerto Rico/PR159-S1/1969) (DENV-2)
POLG_DEN2Q
Dengue virus type 2 (strain Peru/IQT2913/1996) (DENV-2)
POLG_DEN3C
Dengue virus type 3 (strain China/80-2/1980) (DENV-3)
POLG_DEN3I
Dengue virus type 3 (strain Singapore/8120/1995) (DENV-3)
POLG_DEN3M
Dengue virus type 3 (strain Martinique/1243/1999) (DENV-3)
POLG_DEN3P
Dengue virus type 3 (strain Philippines/H87/1956) (DENV-3)
POLG_DEN3S
Dengue virus type 3 (strain Sri Lanka/1266/2000) (DENV-3)
POLG_DEN4D
Dengue virus type 4 (strain Dominica/814669/1981) (DENV-4)
POLG_DEN4H
Dengue virus type 4 (strain Thailand/0476/1997) (DENV-4)
POLG_DEN4P
Dengue virus type 4 (strain Philippines/H241/1956) (DENV-4)
POLG_DEN4S
Dengue virus type 4 (strain Singapore/8976/1995) (DENV-4)
POLG_DEN4T
Dengue virus type 4 (strain Thailand/0348/1991) (DENV-4)
POLG_EC01F
Echovirus 1 (strain Human/Egypt/Farouk/1951) (E-1)
POLG_EC05N
Echovirus 5 (strain Noyce)
POLG_EC06C
Echovirus 6 (strain Charles)
POLG_EC09B
Echovirus 9 (strain Barty)
POLG_EC09H
Echovirus 9 (strain Hill)
POLG_EC11G
Echovirus 11 (strain Gregory)
POLG_EC12T
Echovirus 12 (strain Travis)
POLG_EC30B
Echovirus 30 (strain Bastianni)
POLG_EMCV
Encephalomyocarditis virus
POLG_EMCVB
Encephalomyocarditis virus (strain emc-b nondiabetogenic)
POLG_EMCVD
Encephalomyocarditis virus (strain emc-d diabetogenic)
POLG_ENMGO
Mengo encephalomyocarditis virus
POLG_GBVB
Hepatitis GB virus B (GBV-B) (GB virus B)
POLG_HAV88
Human hepatitis A virus genotype IIB (isolate SLF88) (HHAV) (Human hepatitis A virus (isolate Human/Sierra Leone/SLF88/1988))
POLG_HAVCF
Human hepatitis A virus genotype IIA (isolate CF-53) (HHAV) (Human hepatitis A virus (isolate Human/France/CF-53/1979))
POLG_HAVGB
Human hepatitis A virus genotype IA (isolate GBM) (HHAV) (Human hepatitis A virus (isolate Human/Germany/GBM/1976))
POLG_HAVH2
Human hepatitis A virus genotype IA (isolate H2) (HHAV) (Human hepatitis A virus (isolate Human/China/H2/1982))
POLG_HAVJ8
Human hepatitis A virus genotype IIIB (isolate HAJ85-1) (HHAV) (Human hepatitis A virus (isolate Human/Japan/HAJ85-1/1985))
POLG_HAVLA
Human hepatitis A virus genotype IA (isolate LA) (HHAV) (Human hepatitis A virus (isolate Human/Northern California/LA/1974))
POLG_HAVMB
Human hepatitis A virus genotype IB (isolate MBB) (HHAV) (Human hepatitis A virus (isolate Human/Northern Africa/MBB/1978))
POLG_HAVNO
Human hepatitis A virus genotype IIIA (isolate NOR-21) (HHAV) (Human hepatitis A virus (isolate Human/Norway/NOR-21/1998))
POLG_HAVS2
Simian hepatitis A virus genotype V (isolate AGM-27) (SHAV) (Simian hepatitis A virus (isolate Cercopithecus/Kenya/AGM-27/1985))
POLG_HCV1
Hepatitis C virus genotype 1a (isolate 1) (HCV)
POLG_HCV6A
Hepatitis C virus genotype 6a (isolate 6a33) (HCV)
POLG_HCVBB
Hepatitis C virus genotype 2c (isolate BEBE1) (HCV)
POLG_HCVCO
Hepatitis C virus genotype 1b (isolate Con1) (HCV)
POLG_HCVED
Hepatitis C virus genotype 4a (isolate ED43) (HCV)
POLG_HCVEU
Hepatitis C virus genotype 6a (isolate EUHK2) (HCV)
POLG_HCVEV
Hepatitis C virus genotype 5a (isolate EUH1480) (HCV)
POLG_HCVH9
Hepatitis C virus genotype 1c (isolate HC-G9) (HCV)
POLG_HCVIN
Hepatitis C virus genotype 1c (isolate India) (HCV)
POLG_HCVJ1
Hepatitis C virus genotype 1b (isolate HC-J1) (HCV)
POLG_HCVJ4
Hepatitis C virus genotype 1b (strain HC-J4) (HCV)
POLG_HCVJ6
Hepatitis C virus genotype 2a (isolate HC-J6) (HCV)
POLG_HCVJ8
Hepatitis C virus genotype 2b (isolate HC-J8) (HCV)
POLG_HCVJA
Hepatitis C virus genotype 1b (isolate Japanese) (HCV)
POLG_HCVJF
Hepatitis C virus genotype 2a (isolate JFH-1) (HCV)
POLG_HCVJK
Hepatitis C virus genotype 3k (isolate JK049) (HCV)
POLG_HCVJL
Hepatitis C virus genotype 6g (isolate JK046) (HCV)
POLG_HCVJP
Hepatitis C virus genotype 2b (isolate JPUT971017) (HCV)
POLG_HCVJT
Hepatitis C virus genotype 1b (isolate HC-JT) (HCV)
POLG_HCVK3
Hepatitis C virus genotype 3a (isolate k3a) (HCV)
POLG_HCVNZ
Hepatitis C virus genotype 3a (isolate NZL1) (HCV)
POLG_HCVR6
Hepatitis C virus genotype 1b (isolate HCR6) (HCV)
POLG_HCVSA
Hepatitis C virus genotype 5a (isolate SA13) (HCV)
POLG_HCVT5
Hepatitis C virus genotype 6b (isolate Th580) (HCV)
POLG_HCVTR
Hepatitis C virus genotype 3b (isolate Tr-Kj) (HCV)
POLG_HCVTW
Hepatitis C virus genotype 1b (isolate Taiwan) (HCV)
POLG_HCVVA
Hepatitis C virus genotype 2k (isolate VAT96) (HCV)
POLG_HCVVN
Hepatitis C virus genotype 6d (isolate VN235) (HCV)
POLG_HCVVO
Hepatitis C virus genotype 6k (isolate VN405) (HCV)
POLG_HCVVP
Hepatitis C virus genotype 6h (isolate VN004) (HCV)
POLG_HE701
Human enterovirus 70 (strain J670/71) (EV70) (EV-70)
POLG_HE71
Human enterovirus 71 (EV71) (EV-71)
POLG_HE71B
Human enterovirus 71 (strain USA/BrCr/1970) (EV71) (EV-71)
POLG_HE71M
Human enterovirus 71 (strain 7423/MS/87) (EV71) (EV-71)
POLG_HED68
Human enterovirus D68 (EV68) (EV-68)
POLG_HRV15
Human rhinovirus C (strain C15) (HRV-C15)
POLG_HRV16
Human rhinovirus 16 (HRV-16)
POLG_HRV1A
Human rhinovirus 1A (HRV-1A)
POLG_HRV1B
Human rhinovirus 1B (HRV-1B)
POLG_HRV2
Human rhinovirus 2 (HRV-2)
POLG_HRV3
Human rhinovirus 3 (HRV-3)
POLG_PEV9U
Porcine enterovirus 9 (strain UKG/410/73)
POLG_POL1S
Poliovirus type 1 (strain Sabin)
POLG_POL2L
Poliovirus type 2 (strain Lansing)
POLG_POL2W
Poliovirus type 2 (strain W-2)
POLG_POL32
Poliovirus type 3 (strain 23127)
POLG_POL3L
Poliovirus type 3 (strains P3/Leon/37 and P3/Leon 12A[1]B)
POLG_SVDVH
Swine vesicular disease virus (strain H/3 '76) (SVDV)
POLG_SVDVU
Swine vesicular disease virus (strain UKG/27/72) (SVDV)
POLG_TMEVB
Theiler's murine encephalomyelitis virus (strain BeAn 8386) (TMEV)
POLG_TMEVD
Theiler's murine encephalomyelitis virus (strain DA) (TMEV)
POLG_TMEVG
Theiler's murine encephalomyelitis virus (strain GDVII) (TMEV)

1 entry

Non-structural polyprotein pORF1

POLN_HEVCH
Hepatitis E virus genotype 1 (isolate Human/China/HeBei/1987) (HEV) reference strain

2 entries

65 kDa phosphoprotein (pp65) (65 kDa matrix phosphoprotein) (Phosphoprotein UL83) (Tegument protein UL83)

Select_allDeselect_all
PP65_HCMVA
Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5) reference strain
PP65_HCMVM
Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5) reference strain

26 entries

Replicase polyprotein 1a (pp1a) (ORF1a polyprotein)

Select_allDeselect_all
R1A_BC133
Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005) reference strain
R1A_BCHK4
Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004) reference strain
R1A_BCHK5
Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004) reference strain
R1A_BCHK9
Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9) reference strain
R1A_CVH22
Human coronavirus 229E (HCoV-229E) reference strain
R1A_CVHN2
Human coronavirus HKU1 (isolate N2) (HCoV-HKU1) reference strain
R1A_CVHOC
Human coronavirus OC43 (HCoV-OC43) reference strain
R1A_CVMA5
Murine coronavirus (strain A59) (MHV-A59) (Murine hepatitis virus) reference strain
R1A_CVPPU
Porcine transmissible gastroenteritis coronavirus (strain Purdue) (TGEV) reference strain
R1A_MERS1
Middle East respiratory syndrome-related coronavirus (isolate United Kingdom/H123990006/2012) (MERS-CoV) (Betacoronavirus England 1) reference strain
R1A_SARS
Severe acute respiratory syndrome coronavirus (SARS-CoV) reference strain
R1A_SARS2
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2) reference strain
R1A_BC279
Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005)
R1A_BC512
Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
R1A_BCHK3
Bat coronavirus HKU3 (BtCoV) (SARS-like coronavirus HKU3)
R1A_BCRP3
Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like coronavirus Rp3)
R1A_CVBEN
Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT) (BCV)
R1A_CVBLU
Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN) (BCV)
R1A_CVBM
Bovine coronavirus (strain Mebus) (BCoV) (BCV)
R1A_CVBQ
Bovine coronavirus (strain Quebec) (BCoV) (BCV)
R1A_CVHN1
Human coronavirus HKU1 (isolate N1) (HCoV-HKU1)
R1A_CVHN5
Human coronavirus HKU1 (isolate N5) (HCoV-HKU1)
R1A_CVHNL
Human coronavirus NL63 (HCoV-NL63)
R1A_CVM2
Murine coronavirus (strain 2) (MHV-2) (Murine hepatitis virus)
R1A_CVMJH
Murine coronavirus (strain JHM) (MHV-JHM) (Murine hepatitis virus)
R1A_PEDV7
Porcine epidemic diarrhea virus (strain CV777) (PEDV)

7 entries

Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)

Select_allDeselect_all
R1AB_CVH22
Human coronavirus 229E (HCoV-229E) reference strain
R1AB_CVPPU
Porcine transmissible gastroenteritis coronavirus (strain Purdue) (TGEV) reference strain
R1AB_FIPV
Feline coronavirus (strain FIPV WSU-79/1146) (FCoV) reference strain
R1AB_SARS2
Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2) reference strain

pdb 5R7Y; 5R7Z; 5R80; 5R81; 5R82; 5R83; 5R84; 5R8T; 5RE4; 5RE5; 5RE6; 5RE7; 5RE8; 5RE9; 5REA; 5REB; 5REC; 5RED; 5REE; 5REF; 5REG; 5REH; 5REI; 5REJ; 5REK; 5REL; 5REM; 5REN; 5REO; 5REP; 5RER; 5RES; 5RET; 5REU; 5REV; 5REW; 5REX; 5REY; 5REZ; 5RF0; 5RF1; 5RF2; 5RF3; 5RF4; 5RF5; 5RF6; 5RF7; 5RF8; 5RF9; 5RFA; 5RFB; 5RFC; 5RFD; 5RFE; 5RFF; 5RFG; 5RFH; 5RFI; 5RFJ; 5RFK; 5RFL; 5RFM; 5RFN; 5RFO; 5RFP; 5RFQ; 5RFR; 5RFS; 5RFT; 5RFU; 5RFV; 5RFW; 5RFX; 5RFY; 5RFZ; 5RG0; 5RG1; 5RG2; 5RG3; 5RGG; 5RGH; 5RGI; 5RGJ; 5RGK; 5RGL; 5RGM; 5RGN; 5RGO; 5RGP; 5RGQ; 5RGR; 5RGS; 5RGT; 5RGU; 5RGV; 5RGW; 5RGX; 5RGY; 5RGZ; 5RH0; 5RH1; 5RH2; 5RH3; 5RH4; 5RH5; 5RH6; 5RH7; 5RH8; 5RH9; 5RHA; 5RHB; 5RHC; 5RHD; 5RHE; 5RHF; 5RL0; 5RL1; 5RL2; 5RL3; 5RL4; 5RL5; 5RL6; 5RL7; 5RL8; 5RL9; 5RLB; 5RLC; 5RLD; 5RLE; 5RLF; 5RLG; 5RLH; 5RLI; 5RLJ; 5RLK; 5RLL; 5RLM; 5RLN; 5RLO; 5RLP; 5RLQ; 5RLR; 5RLS; 5RLT; 5RLU; 5RLV; 5RLW; 5RLY; 5RLZ; 5RM0; 5RM1; 5RM2; 5RM3; 5RM4; 5RM5; 5RM6; 5RM7; 5RM8; 5RM9; 5RMA; 5RMB; 5RMC; 5RMD; 5RME; 5RMF; 5RMG; 5RMH; 5RMI; 5RMJ; 5RMK; 5RML; 5RMM; 5ROB; 5RS7; 5RS8; 5RS9; 5RSB; 5RSC; 5RSD; 5RSE; 5RSF; 5RSG; 5RSH; 5RSI; 5RSJ; 5RSK; 5RSL; 5RSM; 5RSN; 5RSO; 5RSP; 5RSQ; 5RSR; 5RSS; 5RST; 5RSU; 5RSV; 5RSW; 5RSX; 5RSY; 5RSZ; 5RT0; 5RT1; 5RT2; 5RT3; 5RT4; 5RT5; 5RT6; 5RT7; 5RT8; 5RT9; 5RTA; 5RTB; 5RTC; 5RTD; 5RTE; 5RTF; 5RTG; 5RTH; 5RTI; 5RTJ; 5RTK; 5RTL; 5RTM; 5RTN; 5RTO; 5RTP; 5RTQ; 5RTR; 5RTS; 5RTT; 5RTU; 5RTV; 5RTW; 5RTX; 5RTY; 5RTZ; 5RU0; 5RU1; 5RU2; 5RU3; 5RU4; 5RU5; 5RU6; 5RU7; 5RU8; 5RU9; 5RUA; 5RUC; 5RUD; 5RUE; 5RUF; 5RUG; 5RUH; 5RUI; 5RUJ; 5RUK; 5RUL; 5RUM; 5RUN; 5RUO; 5RUP; 5RUQ; 5RUR; 5RUS; 5RUT; 5RUU; 5RUV; 5RUW; 5RUX; 5RUY; 5RUZ; 5RV0; 5RV1; 5RV2; 5RV3; 5RV4; 5RV5; 5RV6; 5RV7; 5RV8; 5RV9; 5RVA; 5RVB; 5RVC; 5RVD; 5RVE; 5RVF; 5RVG; 5RVH; 5RVI; 5RVJ; 5RVK; 5RVL; 5RVM; 5RVN; 5RVO; 5RVP; 5RVQ; 5RVR; 5RVS; 5RVT; 5RVU; 5RVV; 5S18; 5S1A; 5S1C; 5S1E; 5S1G; 5S1I; 5S1K; 5S1M; 5S1O; 5S1Q; 5S1S; 5S1U; 5S1W; 5S1Y; 5S20; 5S22; 5S24; 5S26; 5S27; 5S28; 5S29; 5S2A; 5S2B; 5S2C; 5S2D; 5S2E; 5S2F; 5S2G; 5S2H; 5S2I; 5S2J; 5S2K; 5S2L; 5S2M; 5S2N; 5S2O; 5S2P; 5S2Q; 5S2R; 5S2S; 5S2T; 5S2U; 5S2V; 5S2W; 5S2X; 5S2Y; 5S2Z; 5S30; 5S31; 5S32; 5S33; 5S34; 5S35; 5S36; 5S37; 5S38; 5S39; 5S3A; 5S3B; 5S3C; 5S3D; 5S3E; 5S3F; 5S3G; 5S3H; 5S3I; 5S3J; 5S3K; 5S3L; 5S3M; 5S3N; 5S3O; 5S3P; 5S3Q; 5S3R; 5S3S; 5S3T; 5S3U; 5S3V; 5S3W; 5S3X; 5S3Y; 5S3Z; 5S40; 5S41; 5S42; 5S43; 5S44; 5S45; 5S46; 5S47; 5S48; 5S49; 5S4A; 5S4B; 5S4C; 5S4D; 5S4E; 5S4F; 5S4G; 5S4H; 5S4I; 5S4J; 5S4K; 5S6X; 5S6Y; 5S6Z; 5S70; 5S71; 5S72; 5S73; 5S74; 5SA4; 5SA5; 5SA6; 5SA7; 5SA8; 5SA9; 5SAA; 5SAB; 5SAC; 5SAD; 5SAE; 5SAF; 5SAG; 5SAH; 5SAI; 5SBF; 5SKW; 5SKX; 5SKY; 5SKZ; 5SL0; 5SL1; 5SL2; 5SL3; 5SL4; 5SL5; 5SL6; 5SL7; 5SL8; 5SL9; 5SLA; 5SLB; 5SLC; 5SLD; 5SLE; 5SLF; 5SLG; 5SLH; 5SLI; 5SLJ; 5SLK; 5SLL; 5SLM; 5SLN; 5SLO; 5SLP; 5SLQ; 5SLR; 5SLS; 5SLT; 5SLU; 5SLV; 5SLW; 5SLX; 5SLY; 5SLZ; 5SM0; 5SM1; 5SM2; 5SM3; 5SM4; 5SM5; 5SM6; 5SM7; 5SM8; 5SM9; 5SMA; 5SMB; 5SMC; 5SMD; 5SME; 5SMF; 5SMG; 5SMH; 5SMI; 5SMK; 5SML; 5SMM; 5SMN; 5SOI; 5SOJ; 5SOK; 5SOL; 5SOM; 5SON; 5SOO; 5SOP; 5SOQ; 5SOR; 5SOS; 5SOT; 5SOU; 5SOV; 5SOW; 5SOX; 5SOY; 5SOZ; 5SP0; 5SP1; 5SP2; 5SP3; 5SP4; 5SP6; 5SP7; 5SP8; 5SP9; 5SPA; 5SPB; 5SPC; 5SPD; 5SPE; 5SPF; 5SPG; 5SPH; 5SPI; 5SPJ; 5SPK; 5SPL; 5SPM; 5SPN; 5SPO; 5SPP; 5SPQ; 5SPR; 5SPS; 5SPT; 5SPU; 5SPV; 5SPW; 5SPX; 5SPY; 5SPZ; 5SQ0; 5SQ1; 5SQ2; 5SQ3; 5SQ4; 5SQ5; 5SQ6; 5SQ7; 5SQ8; 5SQ9; 5SQA; 5SQB; 5SQC; 5SQD; 5SQE; 5SQF; 5SQG; 5SQH; 5SQI; 5SQJ; 5SQK; 5SQL; 5SQM; 5SQN; 5SQO; 5SQP; 5SQQ; 5SQR; 5SQS; 5SQT; 5SQU; 5SQV; 5SQW; 5SQX; 5SQY; 5SQZ; 5SR0; 5SR1; 5SR2; 5SR3; 5SR4; 5SR5; 5SR6; 5SR7; 5SR8; 5SR9; 5SRA; 5SRB; 5SRC; 5SRD; 5SRE; 5SRF; 5SRG; 5SRH; 5SRI; 5SRJ; 5SRK; 5SRL; 5SRM; 5SRN; 5SRO; 5SRP; 5SRQ; 5SRR; 5SRS; 5SRT; 5SRU; 5SRV; 5SRW; 5SRX; 5SRY; 5SRZ; 5SS0; 5SS1; 5SS2; 5SS3; 5SS4; 5SS5; 5SS6; 5SS7; 5SS8; 5SS9; 5SSA; 5SSB; 5SSC; 5SSD; 5SSE; 5SSF; 5SSG; 5SSH; 5SSI; 5SSJ; 5SSK; 5SSL; 5SSM; 5SSN; 5SSO; 5SSP; 5SSQ; 5SSR; 6LU7; 6LZE; 6M03; 6M0K; 6M2N; 6M2Q; 6M71; 6VWW; 6VXS; 6W01; 6W02; 6W4B; 6W4H; 6W61; 6W63; 6W6Y; 6W75; 6W9C; 6W9Q; 6WC1; 6WCF; 6WEN; 6WEY; 6WIQ; 6WJT; 6WKQ; 6WKS; 6WLC; 6WNP; 6WOJ; 6WQ3; 6WQD; 6WQF; 6WRH; 6WRZ; 6WTC; 6WTJ; 6WTK; 6WTM; 6WTT; 6WUU; 6WVN; 6WX4; 6WXC; 6WXD; 6WZU; 6X1B; 6X4I; 6XA4; 6XA9; 6XAA; 6XB0; 6XB1; 6XB2; 6XBG; 6XBH; 6XBI; 6XCH; 6XDH; 6XFN; 6XG3; 6XHM; 6XHU; 6XIP; 6XKF; 6XKH; 6XKM; 6XMK; 6XOA; 6XQS; 6XQT; 6XQU; 6XR3; 6Y2E; 6Y2F; 6Y2G; 6Y84; 6YB7; 6YNQ; 6YVA; 6YVF; 6YWK; 6YWL; 6YWM; 6YYT; 6YZ1; 6Z2E; 6Z5T; 6Z6I; 6Z72; 6ZCT; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 6ZPE; 6ZRT; 6ZRU; 6ZSL; 7A1U; 7ABU; 7ADW; 7AEG; 7AEH; 7AF0; 7AGA; 7AHA; 7AK4; 7AKU; 7ALH; 7ALI; 7AMJ; 7ANS; 7AOL; 7AP6; 7APH; 7AQE; 7AQI; 7AQJ; 7AR5; 7AR6; 7ARF; 7AU4; 7AVD; 7AWR; 7AWS; 7AWU; 7AWW; 7AX6; 7AXM; 7AXO; 7AY7; 7B2J; 7B2U; 7B3E; 7B5Z; 7B77; 7B83; 7BAJ; 7BAK; 7BAL; 7BB2; 7BE7; 7BF3; 7BF4; 7BF5; 7BF6; 7BFB; 7BGP; 7BIJ; 7BQ7; 7BQY; 7BRO; 7BRP; 7BTF; 7BUY; 7BV1; 7BV2; 7BWQ; 7BZF; 7C2I; 7C2J; 7C2K; 7C2Q; 7C2Y; 7C6S; 7C6U; 7C7P; 7C8B; 7C8R; 7C8T; 7C8U; 7CA8; 7CAM; 7CB7; 7CBT; 7CJD; 7CJM; 7CMD; 7COM; 7CUT; 7CUU; 7CWB; 7CWC; 7CX9; 7CYQ; 7D1M; 7D1O; 7D7K; 7D7L; 7DDC; 7DG6; 7DIY; 7DVX; 7DVY; 7DW0; 7DW6; 7E18; 7E19; 7E5X; 7E6K; 7EQ4; 7FR0; 7FR1; 7FR2; 7FR3; 7FR4; 7FR5; 7FR6; 7FR7; 7FR8; 7FR9; 7FRA; 7FRB; 7FRC; 7FRD; 7JFQ; 7JHE; 7JIB; 7JKV; 7JME; 7JOY; 7JP0; 7JP1; 7JPE; 7JPY; 7JPZ; 7JQ0; 7JQ1; 7JQ2; 7JQ3; 7JQ4; 7JQ5; 7JQB; 7JQC; 7JR3; 7JR4; 7JST; 7JSU; 7JT0; 7JT7; 7JU7; 7JUN; 7JVZ; 7JW8; 7JYC; 7JYY; 7JZ0; 7K0E; 7K0F; 7K0R; 7K1L; 7K1O; 7K3N; 7K3T; 7K40; 7K5I; 7K6D; 7K6E; 7K7P; 7K9P; 7KAG; 7KEG; 7KEH; 7KF4; 7KFI; 7KG3; 7KHP; 7KOA; 7KPH; 7KQO; 7KQP; 7KQW; 7KR0; 7KR1; 7KRI; 7KVL; 7KVR; 7KX5; 7KXB; 7KYU; 7L0D; 7L10; 7L11; 7L12; 7L13; 7L14; 7L1F; 7L5D; 7L6R; 7L6T; 7L8I; 7L8J; 7LB7; 7LBN; 7LBR; 7LBS; 7LCO; 7LCR; 7LCS; 7LCT; 7LDL; 7LDX; 7LFE; 7LFP; 7LFZ; 7LG2; 7LG3; 7LG7; 7LGO; 7LHQ; 7LKD; 7LKE; 7LKR; 7LKS; 7LKT; 7LKU; 7LKV; 7LKW; 7LKX; 7LLF; 7LLZ; 7LMD; 7LME; 7LMF; 7LOS; 7LTJ; 7LTN; 7LW3; 7LW4; 7LYH; 7LYI; 7LZT; 7LZU; 7LZV; 7LZW; 7LZX; 7LZY; 7LZZ; 7M00; 7M01; 7M02; 7M03; 7M04; 7M2P; 7M8M; 7M8N; 7M8O; 7M8P; 7M8X; 7M8Y; 7M8Z; 7M90; 7M91; 7MAT; 7MAU; 7MAV; 7MAW; 7MAX; 7MAZ; 7MB0; 7MB1; 7MB2; 7MB3; 7MB6; 7MB7; 7MB8; 7MB9; 7MBG; 7MBI; 7MC5; 7MC6; 7ME0; 7MGR; 7MGS; 7MHF; 7MHG; 7MHH; 7MHI; 7MHJ; 7MHK; 7MHL; 7MHM; 7MHN; 7MHO; 7MHP; 7MHQ; 7MLF; 7MLG; 7MNG; 7MPB; 7MRR; 7MSW; 7MSX; 7N06; 7N0B; 7N0C; 7N0D; 7N33; 7N3K; 7N44; 7N5Z; 7N6N; 7N7R; 7N7U; 7N7W; 7N7Y; 7N83; 7N89; 7N8C; 7NBR; 7NBS; 7NBT; 7NBY; 7NEO; 7NEV; 7NF5; 7NFV; 7NG3; 7NG6; 7NIJ; 7NIO; 7NN0; 7NNG; 7NT4; 7NTS; 7O46; 7O7Y; 7O7Z; 7O80; 7O81; 7ORR; 7ORU; 7ORV; 7ORW; 7P2G; 7P2O; 7PFL; 7PFM; 7PHZ; 7PKU; 7PXZ; 7PZQ; 7Q5E; 7Q5F; 7QBB; 7QG7; 7QGI; 7QIF; 7QKA; 7QT5; 7QT6; 7QT7; 7QT8; 7QT9; 7R1T; 7R1U; 7R2V; 7R7H; 7RB0; 7RB2; 7RBZ; 7RC0; 7RFR; 7RFS; 7RFU; 7RFW; 7RLS; 7RM2; 7RMB; 7RME; 7RMT; 7RMZ; 7RN0; 7RN1; 7RN4; 7RNH; 7RNK; 7RNW; 7RQG; 7RVM; 7RVN; 7RVO; 7RVP; 7RVQ; 7RVR; 7RVS; 7RVT; 7RVU; 7RVV; 7RVW; 7RVX; 7RVY; 7RVZ; 7RW0; 7RW1; 7S3K; 7S3S; 7S4B; 7S6W; 7S6X; 7S6Y; 7S6Z; 7S70; 7S71; 7S72; 7S73; 7S74; 7S75; 7S82; 7SD9; 7SDA; 7SDC; 7SET; 7SF1; 7SF3; 7SFB; 7SFH; 7SFI; 7SGH; 7SH7; 7SH8; 7SH9; 7SI9; 7T2T; 7T2U; 7T2V; 7T42; 7T43; 7T44; 7T45; 7T46; 7T48; 7T49; 7T4A; 7T4B; 7T70; 7T8M; 7T8R; 7T9W; 7T9Y; 7TA4; 7TA7; 7TB2; 7TBT; 7TC4; 7TDU; 7TE0; 7TEH; 7TEK; 7TEL; 7TFR; 7TGR; 7THH; 7TI9; 7TJ2; 7TQ2; 7TQ3; 7TQ4; 7TQ5; 7TQ6; 7TQV; 7TW7; 7TW8; 7TW9; 7TWF; 7TWG; 7TWH; 7TWI; 7TWJ; 7TWN; 7TWO; 7TWP; 7TWQ; 7TWR; 7TWS; 7TWT; 7TWV; 7TWW; 7TWX; 7TWY; 7TX0; 7TX1; 7TX3; 7TX4; 7TX5; 7U92; 7UKK; 7ULT; 7UR9; 7URB; 7US4; 7UU6; 7UU7; 7UU8; 7UU9; 7UUA; 7UUB; 7UUC; 7UUD; 7UUE; 7UUG; 7UUP; 7VAH; 7VVP; 7WHC; 7WOH; 7WQ8; 7WQ9; 7WQA; 7WQK; 7X6Y; 7X6Z; 7X70; 7YWR; 7Z2K; 7Z3U; 7Z59; 7ZB6; 7ZB7; 7ZB8; 7ZQV; 7ZV5; 7ZV7; 7ZV8; 8A23; 8A4Q; 8A4T; 8A4Y; 8A55; 8ACD; 8ACL; 8AEB; 8AIQ; 8AIU; 8AIV; 8AIZ; 8AJ0; 8AOU; 8AZ8; 8B2T; 8B56; 8BSD; 8BWU; 8BZV; 8C19; 8C1A; 8C5M; 8CMF; 8CMG; 8CRF; 8CRK; 8CRM; 8CYU; 8CYZ; 8CZ4; 8CZ7; 8CZW; 8CZX; 8D34; 8D35; 8D4J; 8D4K; 8D4L; 8D4M; 8D4N; 8D4P; 8DCZ; 8DD1; 8DD9; 8DDI; 8DDM; 8DFE; 8DFN; 8DGB; 8DIB; 8DIC; 8DID; 8DIE; 8DIF; 8DIG; 8DIH; 8DII; 8DJJ; 8DK8; 8DKH; 8DKK; 8DKL; 8DKZ; 8DL9; 8DLB; 8DMD; 8DMN; 8DOX; 8DOY; 8DPR; 8DQU; 8DRR; 8DRS; 8DRT; 8DRU; 8DRV; 8DRW; 8DRX; 8DRY; 8DRZ; 8DS0; 8DS1; 8DS2; 8DSU; 8DZ0; 8DZ1; 8DZ2; 8DZ6; 8DZ9; 8DZA; 8DZB; 8DZC; 8E1Y; 8E25; 8E26; 8E4J; 8E4R; 8E5X; 8E5Z; 8E61; 8E63; 8E64; 8E65; 8E68; 8E69; 8E6A; 8EHJ; 8EHK; 8EHL; 8EHM; 8EIR; 8EJ7; 8EJ9; 8EKE; 8EOY; 8ERS; 8EUA; 8EY2; 8EYJ; 8EZV; 8EZZ; 8F02; 8F2C; 8F2D; 8F2E; 8F44; 8F45; 8F46; 8FIV; 8FIW; 8FRJ; 8FRK; 8FWN; 8FY6; 8FY7; 8GFK; 8GFN; 8GFO; 8GFR; 8GFU; 8GIA; 8GW4; 8GWJ; 8GWS; 8HDA; 8HEF; 8OKK; 8OKL; 8OKM; 8OKN; 8OSX; 8OT0; 8OTO; 8OTR; 8OV1; 8OV2; 8OV3; 8OV4; 8SG6; 8SK4; 8SKH; 8STY; 8STZ; 8SXR; 8TBE; 8U2X

R1AB_BC512
Bat coronavirus 512/2005 (BtCoV) (BtCoV/512/2005)
R1AB_CVHNL
Human coronavirus NL63 (HCoV-NL63)
R1AB_PEDV7
Porcine epidemic diarrhea virus (strain CV777) (PEDV)

3 entries

Accessory factor US11 (Vmw21)

Select_allDeselect_all
RNB_HHV11
Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain
RNB_HHV2H
Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain

Probable RNA-binding protein

RNB_HHV1M
Human herpesvirus 1 (strain MP) (HHV-1) (Human herpes simplex virus 1)

RNA-binding protein (Vmw21)

1 entry

Small t antigen (ST) (ST-AG)

ST_POVJC
JC polyomavirus (JCPyV) (JCV) reference strain

1 entry

Serine/threonine-protein kinase UL13 (EC 2.7.11.1)

UL13_SUHVN
Suid herpesvirus 1 (strain NIA-3) (SuHV-1) (Pseudorabies virus (strain NIA-3))

28 entries

Non-structural protein V

Select_allDeselect_all
V_HENDH
Hendra virus (isolate Horse/Autralia/Hendra/1994) reference strain
V_MEASC
Measles virus (strain Ichinose-B95a) (MeV) (Subacute sclerose panencephalitis virus) reference strain
V_MUMPM
Mumps virus (strain Miyahara vaccine) (MuV) reference strain

Non-structural protein V (Non-structural protein NS1)

V_NDVB1
Newcastle disease virus (strain Chicken/United States/B1/48) (NDV) reference strain

Protein V

V_NIPAV
Nipah virus reference strain
V_PI2HT
Human parainfluenza 2 virus (strain Toshiba) (HPIV-2) reference strain
V_PIV5
Parainfluenza virus 5 (strain W3) (PIV5) (Simian virus 5) reference strain
V_SENDA
Sendai virus (strain Hamamatsu) (SeV) reference strain

Protein V

V_SV41
Simian virus 41 (SV41) reference strain
V_TPMV
Tupaia paramyxovirus (TPMV) reference strain
V_MEASA
Measles virus (strain Edmonston-AIK-C vaccine) (MeV) (Subacute sclerose panencephalitis virus)
V_MEASE
Measles virus (strain Edmonston) (MeV) (Subacute sclerose panencephalitis virus)
V_MEASI
Measles virus (strain IP-3-Ca) (MeV) (Subacute sclerose panencephalitis virus)
V_MEASY
Measles virus (strain Yamagata-1) (MeV) (Subacute sclerose panencephalitis virus)
V_MUMP1
Mumps virus (strain SBL-1) (MuV)

Non-structural protein V (Non-structural protein NS1)

V_MUMPE
Mumps virus (strain Enders) (MuV)

Non-structural protein V (Non-structural protein NS1)

V_MUMPS
Mumps virus (strain SBL) (MuV)

Non-structural protein V (Non-structural protein NS1)

V_NDVU2
Newcastle disease virus (strain Ulster/2C) (NDV)
V_PHODV
Phocine distemper virus (PDV)
V_PI2H
Human parainfluenza 2 virus (HPIV-2)
V_PI4HA
Human parainfluenza 4a virus (strain Toshiba) (HPIV-4a)
V_PI4HB
Human parainfluenza 4b virus (strain 68-333) (HPIV-4b)
V_RINDK
Rinderpest virus (strain Kabete O) (RDV)
V_RINDR
Rinderpest virus (strain RBOK) (RDV)
V_SENDF
Sendai virus (strain Fushimi) (SeV)

Protein V

V_SENDH
Sendai virus (strain Harris) (SeV)

Protein V

V_SENDO
Sendai virus (strain Ohita) (SeV)

Protein V

V_SENDZ
Sendai virus (strain Z) (SeV) (Sendai virus (strain HVJ))

Protein V

16 entries

Protein E6

Select_allDeselect_all
VE6_HPV16
Human papillomavirus type 16 reference strain
VE6_HPV18
Human papillomavirus type 18 reference strain
VE6_HPV31
Human papillomavirus 31 reference strain
VE6_HPV35
Human papillomavirus 35 reference strain
VE6_HPV26
Human papillomavirus type 26
VE6_HPV30
Human papillomavirus 30
VE6_HPV33
Human papillomavirus 33
VE6_HPV34
Human papillomavirus type 34
VE6_HPV39
Human papillomavirus 39
VE6_HPV45
Human papillomavirus 45
VE6_HPV51
Human papillomavirus 51
VE6_HPV52
Human papillomavirus 52
VE6_HPV58
Human papillomavirus 58
VE6_HPV68
Human papillomavirus 68
VE6_HPV69
Human papillomavirus 69
VE6_HPV70
Human papillomavirus type 70

1 entry

Envelope small membrane protein (E protein) (sM protein)

VEMP_PEDV7
Porcine epidemic diarrhea virus (strain CV777) (PEDV)

5 entries

Protein I267L (pI267L)

Select_allDeselect_all
VF267_ASFB7
African swine fever virus (strain Badajoz 1971 Vero-adapted) (Ba71V) (ASFV) reference strain
VF267_ASFK5
African swine fever virus (isolate Pig/Kenya/KEN-50/1950) (ASFV)
VF267_ASFM2
African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) (ASFV)
VF267_ASFP4
African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) (ASFV)
VF267_ASFWA
African swine fever virus (isolate Warthog/Namibia/Wart80/1980) (ASFV)

5 entries

Uncharacterized protein E301R

Select_allDeselect_all
VF301_ASFB7
African swine fever virus (strain Badajoz 1971 Vero-adapted) (Ba71V) (ASFV) reference strain
VF301_ASFK5
African swine fever virus (isolate Pig/Kenya/KEN-50/1950) (ASFV)
VF301_ASFM2
African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) (ASFV)
VF301_ASFP4
African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) (ASFV)
VF301_ASFWA
African swine fever virus (isolate Warthog/Namibia/Wart80/1980) (ASFV)

1 entry

Major surface glycoprotein G (Attachment glycoprotein G) (Membrane-bound glycoprotein) (mG)

VGLG_HMPVC
Human metapneumovirus (strain CAN97-83) (HMPV) reference strain

1 entry

VIRF-1

VIRF1_HHV8P
Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) reference strain

1 entry

Viral IRF2-like protein (vIRF-2)

VIRF2_HHV8P
Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) reference strain

1 entry

Viral IRF4-like protein (vIRF-4)

VIRF4_HHV8P
Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) reference strain

5 entries

Polymerase cofactor VP35

Select_allDeselect_all
VP35_EBOZM
Zaire ebolavirus (strain Mayinga-76) (ZEBOV) (Zaire Ebola virus) reference strain

Polymerase cofactor VP35 (Ebola VP35) (eVP35)

VP35_EBORE
Reston ebolavirus (strain Philippines-96) (REBOV) (Reston Ebola virus)
VP35_EBORR
Reston ebolavirus (strain Reston-89) (REBOV) (Reston Ebola virus)
VP35_EBOSU
Sudan ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV) (Sudan Ebola virus)
VP35_EBOZ5
Zaire ebolavirus (strain Kikwit-95) (ZEBOV) (Zaire Ebola virus)

Polymerase cofactor VP35 (Ebola VP35) (eVP35)

2 entries

DNA polymerase processivity factor (Polymerase accessory protein) (PAP) (Protein ICP36)

Select_allDeselect_all
VPAP_HCMVA
Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5) reference strain
VPAP_HCMVM
Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5) reference strain