Macavirus (taxid:548687)

VIRION

image

Enveloped, spherical to pleomorphic, 150-200 nm in diameter, T=16 icosahedral symmetry. Capsid consists of 162 capsomers and is surrounded by an amorphous tegument. Glycoproteins complexes are embeded in the lipid envelope.

GENOME

Monopartite, linear, dsDNA genome of about 180 kb. The genome contains terminal and internal reiterated sequences.

GENE EXPRESSION

Each viral transcript usually encodes a single protein and has a promoter/regulatory sequence, a TATA box, a transcription initiation site, a 5' leader sequence of 30-300 bp (not translated), a 3' nontranslated sequence of 10-30 bp, and a poly A signal. There are many gene overlaps. There are only few spliced genes. Some of the expressed ORFs are antisense to each other. Some ORFs can be accessed from more than one promoter. There are some non-coding genes.

ENZYMES

REPLICATION

NUCLEAR

Lytic replication:

  1. Attachment of the viral glycoproteins to host receptors mediates endocytosis of the virus into the host cell.
  2. Fusion with the plasma membrane to release the core and the tegument proteins into the host cytoplasm.
  3. The capsid is transported to the nuclear pore where the viral DNA is released into the nucleus.
  4. Transcription of immediate early genes which promote transcription of early genes and protect the virus against innate host immunity.
  5. Transcription of early viral mRNA by host polymerase II, encoding proteins involved in replication of the viral DNA.
  6. A first round of circular genome amplification occurs by bidirectional replication
  7. Synthesis of linear concatemer copies of viral DNA by rolling circle.
  8. Transcription of late mRNAs by host polymerase II, encoding structural proteins.
  9. Assembly of the virus in nuclear viral factories and budding through the inner lamella of the nuclear membrane which has been modified by the insertion of herpes glycoproteins, throughout the Golgi and final release at the plasma membrane.

Latent replication : replication of circular viral episome in tandem with the host cell DNA using the host cell replication machinery.

Host-virus interaction

Apoptosis modulation

Alcelaphine herpesvirus 1 encodes a bcl-2 homologue that may inhibit host apoptosis.

Host splicing inhibition

Modulates the viral and host mRNA expression by exporting unspliced mRNA, thereby inducing alternative splicing.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

71 entries grouped by strain

70 entries

Alcelaphine herpesvirus 1 (strain C500) (AlHV-1) (Malignant catarrhal fever virus) reference strain

Select_allDeselect_all
GB_ALHV1 Envelope glycoprotein B (gB)
SCAF_ALHV1 Capsid scaffolding protein (Capsid protein 17) (Protease precursor) (pPR) [Cleaved into: Assemblin ...
VGA5_ALHV1 G-protein coupled receptor A5
KITH_ALHV1 Thymidine kinase (EC 2.7.1.21)
GH_ALHV1 Envelope glycoprotein H (gH)
AN_ALHV1 Shutoff alkaline exonuclease (SOX) (EC 3.1.-.-)
CEP3_ALHV1 Cytoplasmic envelopment protein 3
GM_ALHV1 Envelope glycoprotein M (gM)
GL_ALHV1 Envelope glycoprotein L (gL)
GN_ALHV1 Envelope glycoprotein N
RIR2_ALHV1 Ribonucleoside-diphosphate reductase small subunit (EC 1.17.4.1) (Ribonucleotide reductase small ...
RIR1_ALHV1 Ribonucleoside-diphosphate reductase large subunit (R1) (EC 1.17.4.1) (Ribonucleotide reductase ...
LTP_ALHV1 Large tegument protein deneddylase (EC 3.4.19.12) (EC 3.4.22.-)
SEMA_ALHV1 Semaphorin-like protein A3
VGA4_ALHV1 Uncharacterized gene A4 protein
DNBI_ALHV1 Major DNA-binding protein
TRM1_ALHV1 Tripartite terminase subunit 1
DPOL_ALHV1 DNA polymerase catalytic subunit (EC 2.7.7.7)
CVC2_ALHV1 Capsid vertex component 2
MCP_ALHV1 Major capsid protein (MCP)
TRX2_ALHV1 Triplex capsid protein 2
TRM3_ALHV1 Tripartite terminase subunit 3 (EC 3.1.-.-) (Terminase large subunit)
CVC1_ALHV1 Capsid vertex component 1
CEP2_ALHV1 Cytoplasmic envelopment protein 2
VG36_ALHV1 Putative tyrosine kinase 36 (EC 2.7.10.2)
CEP1_ALHV1 Cytoplasmic envelopment protein 1
PORTL_ALHV1 Portal protein
HELI_ALHV1 DNA replication helicase (EC 3.6.4.-)
UNG_ALHV1 Uracil-DNA glycosylase (UDG) (EC 3.2.2.27) (UNG)
BRLF1_ALHV1 Putative transcription activator BRLF1 homolog
VGA7_ALHV1 Putative C-type lectin protein A7
VGA8_ALHV1 Uncharacterized gene A8 protein
DUT_ALHV1 Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (EC 3.6.1.23) (dUTP pyrophosphatase)
TEG7_ALHV1 Tegument protein UL51 homolog (Uncharacterized gene 55 protein)
PRIM_ALHV1 DNA primase (EC 2.7.7.-)
IE63_ALHV1 Immediate-early phosphoprotein 57
VG59_ALHV1 DNA polymerase processivity factor
TRX1_ALHV1 Triplex capsid protein 1
ITP_ALHV1 Inner tegument protein
SCP_ALHV1 Small capsomere-interacting protein
UL49_ALHV1 Uncharacterized gene 66 protein
NEC2_ALHV1 Nuclear egress protein 2
TRM2_ALHV1 Tripartite terminase subunit 2
UL32_ALHV1 Packaging protein UL32 homolog
NEC1_ALHV1 Nuclear egress protein 1
VGA9_ALHV1 Putative apoptosis regulator A9
VGA10_ALHV1 Uncharacterized gene A10 protein
VGA1_ALHV1 Uncharacterized gene A1 protein
VG10_ALHV1 Uncharacterized gene 10 protein
VG11_ALHV1 Uncharacterized gene 11 protein
UL79_ALHV1 Gene 18 protein
UL24_ALHV1 Protein UL24 homolog
VG23_ALHV1 Uncharacterized gene 23 protein
UL87_ALHV1 Uncharacterized gene 24 protein
VG27_ALHV1 Uncharacterized gene 27 protein
UL91_ALHV1 Uncharacterized gene 30 protein
UL92_ALHV1 Gene 31 protein
UL95_ALHV1 Gene 34 protein
UL96_ALHV1 Gene 35 protein
VG40_ALHV1 Uncharacterized gene 40 protein
VG41_ALHV1 Uncharacterized gene 41 protein
VG45_ALHV1 Uncharacterized gene 45 protein
VG48_ALHV1 Uncharacterized gene 48 protein
VGA6_ALHV1 Uncharacterized gene A6 protein
VG52_ALHV1 Uncharacterized gene 52 protein
VG58_ALHV1 Gene 58 protein
VG73_ALHV1 Uncharacterized gene 73 protein
VP75_ALHV1 Probable membrane antigen 75 (Tegument protein)
VGA2_ALHV1 Uncharacterized protein A2
VP03_ALHV1 Probable tegument protein antigen 3

1 entry

Alcelaphine herpesvirus 1 (strain WC11) (AlHV-1) (Malignant catarrhal fever virus)

KITH_AHV1W Thymidine kinase (EC 2.7.1.21)
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Alcelaphine gammaherpesvirus 1 taxid:35252

Protein ModelArchive
A2 ma-jd-viral-12263
AHV-sema ma-jd-viral-54620

Alcelaphine gammaherpesvirus 2 taxid:138184

Protein ModelArchive
A10 ma-jd-viral-54278
A2 ma-jd-viral-12262
A3 ma-jd-viral-54622
A4 ma-jd-viral-47653
A5 ma-jd-viral-18463
A6 ma-jd-viral-65383
A7 ma-jd-viral-16438
A8 ma-jd-viral-48546
A9 ma-jd-viral-04753
Capsid scaffolding protein (Protease precursor) (pPR) ma-jd-viral-12520
Cytoplasmic envelopment protein 3 ma-jd-viral-36422
DNA polymerase (EC 2.7.7.7) ma-jd-viral-17261
Orf10 ma-jd-viral-12793
Orf11 ma-jd-viral-12699
Orf18 ma-jd-viral-54797
Orf19 ma-jd-viral-01791
Orf20 ma-jd-viral-12126
Orf21 ma-jd-viral-05879
Orf22 ma-jd-viral-16887
Orf23 ma-jd-viral-10995
Orf24 ma-jd-viral-50966
Orf26 ma-jd-viral-04766
Orf27 ma-jd-viral-52486
Orf29 ma-jd-viral-06485
Orf30 ma-jd-viral-52798
Orf31 ma-jd-viral-51398
Orf32 ma-jd-viral-02090
Orf33 ma-jd-viral-02683
Orf34 ma-jd-viral-36740
Orf35 ma-jd-viral-14619
Orf36 ma-jd-viral-24737
Orf37 ma-jd-viral-08477
Orf39 ma-jd-viral-37852
Orf4 ma-jd-viral-06292
Orf40 ma-jd-viral-17362
Orf41 ma-jd-viral-09836
Orf42 ma-jd-viral-14120
Orf43 ma-jd-viral-59307
Orf44 ma-jd-viral-37573
Orf45 ma-jd-viral-62374
Orf46 ma-jd-viral-07758
Orf47 ma-jd-viral-03927
Orf48 ma-jd-viral-14042
Orf50 ma-jd-viral-36974
Orf52 ma-jd-viral-07458
Orf53 ma-jd-viral-38375
Orf54 ma-jd-viral-12808
Orf55 ma-jd-viral-37471
Orf56 ma-jd-viral-33332
Orf57 ma-jd-viral-15550
Orf58 ma-jd-viral-02351
Orf59 ma-jd-viral-21501
Orf6 ma-jd-viral-35414
Orf62 ma-jd-viral-09156
Orf63 ma-jd-viral-14855
Orf66 ma-jd-viral-21393
Orf67 ma-jd-viral-12405
Orf67A ma-jd-viral-51040
Orf69 ma-jd-viral-10273
Orf7 ma-jd-viral-61508
Orf8 ma-jd-viral-31218
Packaging protein UL32 ma-jd-viral-40937
Ribonucleoside-diphosphate reductase large subunit (R1) (EC 1.17.4.1) (Ribonucleotide reductase large... ma-jd-viral-14260
Small capsomere-interacting protein ma-jd-viral-29508
ribonucleoside-diphosphate reductase (EC 1.17.4.1) ma-jd-viral-05436

Alcelaphine herpesvirus 1 (strain C500) taxid:654901

Protein ModelArchive
Capsid scaffolding protein (Capsid protein 17) (Protease precursor) (pPR) ma-jd-viral-12453
Capsid vertex component 1 ma-jd-viral-02093
Capsid vertex component 2 ma-jd-viral-01792
Cytoplasmic envelopment protein 1 ma-jd-viral-14124
Cytoplasmic envelopment protein 2 ma-jd-viral-02697
Cytoplasmic envelopment protein 3 ma-jd-viral-36424
DNA polymerase catalytic subunit (EC 2.7.7.7) ma-jd-viral-17272
DNA polymerase processivity factor ma-jd-viral-21498
DNA primase (EC 2.7.7.-) ma-jd-viral-33331
DNA replication helicase (EC 3.6.4.-) ma-jd-viral-37562
Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (EC 3.6.1.23) (dUTP... ma-jd-viral-12813
Envelope glycoprotein B (gB) ma-jd-viral-31200
Envelope glycoprotein H (gH) ma-jd-viral-16880
Envelope glycoprotein L (gL) ma-jd-viral-03923
Envelope glycoprotein M (gM) ma-jd-viral-37866
Envelope glycoprotein N ma-jd-viral-38378
G-protein coupled receptor A5 ma-jd-viral-18460
Gene 18 protein ma-jd-viral-54805
Gene 31 protein ma-jd-viral-51382
Gene 34 protein ma-jd-viral-36744
Gene 35 protein ma-jd-viral-14618
Gene 58 protein ma-jd-viral-02363
Immediate-early phosphoprotein 57 ma-jd-viral-15556
Inner tegument protein ma-jd-viral-14866
Major capsid protein (MCP) ma-jd-viral-63090
Nuclear egress protein 1 ma-jd-viral-10281
Nuclear egress protein 2 ma-jd-viral-12402
Packaging protein UL32 homolog ma-jd-viral-40962
Portal protein ma-jd-viral-59289
Protein UL24 homolog ma-jd-viral-12135
Putative C-type lectin protein A7 ma-jd-viral-16433
Putative apoptosis regulator A9 ma-jd-viral-04754
Putative transcription activator BRLF1 homolog ma-jd-viral-36975
Putative tyrosine kinase 36 (EC 2.7.10.2) ma-jd-viral-24750
Ribonucleoside-diphosphate reductase large subunit (R1) (EC 1.17.4.1) (Ribonucleotide reductase large... ma-jd-viral-14258
Ribonucleoside-diphosphate reductase small subunit (EC 1.17.4.1) (Ribonucleotide reductase small... ma-jd-viral-05451
Semaphorin-like protein A3 ma-jd-viral-54620
Shutoff alkaline exonuclease (SOX) (EC 3.1.-.-) ma-jd-viral-08474
Small capsomere-interacting protein ma-jd-viral-29509
Tegument protein UL51 homolog (Uncharacterized gene 55 protein) ma-jd-viral-37475
Thymidine kinase (EC 2.7.1.21) ma-jd-viral-05873
Tripartite terminase subunit 1 ma-jd-viral-61461
Tripartite terminase subunit 2 ma-jd-viral-51031
Tripartite terminase subunit 3 (EC 3.1.-.-) (Terminase large subunit) ma-jd-viral-06522
Triplex capsid protein 1 ma-jd-viral-09170
Triplex capsid protein 2 ma-jd-viral-04777
Uncharacterized gene 10 protein ma-jd-viral-12791
Uncharacterized gene 11 protein ma-jd-viral-12701
Uncharacterized gene 23 protein ma-jd-viral-10998
Uncharacterized gene 24 protein ma-jd-viral-50948
Uncharacterized gene 27 protein ma-jd-viral-52479
Uncharacterized gene 30 protein ma-jd-viral-52800
Uncharacterized gene 40 protein ma-jd-viral-17369
Uncharacterized gene 41 protein ma-jd-viral-09837
Uncharacterized gene 45 protein ma-jd-viral-62376
Uncharacterized gene 48 protein ma-jd-viral-14040
Uncharacterized gene 52 protein ma-jd-viral-07460
Uncharacterized gene 66 protein ma-jd-viral-21390
Uncharacterized gene A1 protein ma-jd-viral-59452
Uncharacterized gene A10 protein ma-jd-viral-32327
Uncharacterized gene A4 protein ma-jd-viral-47654
Uncharacterized gene A6 protein ma-jd-viral-65384
Uncharacterized gene A8 protein ma-jd-viral-63778
Uncharacterized protein A2 ma-jd-viral-12263
Uracil-DNA glycosylase (UDG) (EC 3.2.2.27) (UNG) ma-jd-viral-07764

Bovine gammaherpesvirus 6 taxid:1504288

Protein ModelArchive
Alkaline exonuclease ma-jd-viral-08485
Bcl-2 ma-jd-viral-04756
Bov1.b1 ma-jd-viral-43601
Bov1.b2 ma-jd-viral-41076
Bov1.b3 ma-jd-viral-39652
Bov1.b4 ma-jd-viral-35757
Bov11.b1 ma-jd-viral-36710
Bov2 ma-jd-viral-50703
Bov2.b1 ma-jd-viral-52000
Bov2.b3 ma-jd-viral-53609
Bov6 ma-jd-viral-01797
Bov9.b1 ma-jd-viral-66254
Bov9.b2 ma-jd-viral-41881
Capsid scaffold protein ma-jd-viral-52948
Capsid scaffolding protein (Protease precursor) (pPR) ma-jd-viral-12504
Capsid triplex subunit 1 ma-jd-viral-09157
Capsid triplex subunit 2 ma-jd-viral-04768
Cytoplasmic envelopment protein 3 ma-jd-viral-36419
DNA packaging tripartate terminase subunit ma-jd-viral-06498
DNA polymerase (EC 2.7.7.7) ma-jd-viral-17275
G protein-coupled receptor ma-jd-viral-18462
Glycoprotein B ma-jd-viral-31253
Glycoprotein H ma-jd-viral-16892
Glycoprotein M ma-jd-viral-37882
Helicase-primase complex ma-jd-viral-17361
Helicase-primase primase subunit ma-jd-viral-33309
Helicase-primase subunit ma-jd-viral-37548
Interleukin-10 domain protein ma-jd-viral-64884
Minor capsid protein ma-jd-viral-59269
ORF10 ma-jd-viral-12792
ORF11 ma-jd-viral-12702
ORF18 ma-jd-viral-54774
ORF20 ma-jd-viral-12128
ORF23 ma-jd-viral-11006
ORF24 ma-jd-viral-50964
ORF27 ma-jd-viral-52480
ORF30 ma-jd-viral-52794
ORF31 ma-jd-viral-51374
ORF32 ma-jd-viral-02099
ORF34 ma-jd-viral-36730
ORF35 ma-jd-viral-14638
ORF42 ma-jd-viral-14117
ORF45 ma-jd-viral-62375
ORF47 ma-jd-viral-03925
ORF48 ma-jd-viral-14041
ORF52 ma-jd-viral-07457
ORF53 ma-jd-viral-38379
ORF55 ma-jd-viral-37459
ORF58 ma-jd-viral-02350
ORF66 ma-jd-viral-21391
ORF67a ma-jd-viral-51035
ORF69 ma-jd-viral-10277
Ornithine decarboxylase ma-jd-viral-64199
Packaging protein UL32 ma-jd-viral-40923
Processivity factor ma-jd-viral-21490
Putative glycoprotein ma-jd-viral-16434
Putative immediate early protein ma-jd-viral-43678
Putative major envelope glycoprotein ma-jd-viral-11032
Putative tyrosine kinase ma-jd-viral-24753
R-transactivator ma-jd-viral-36972
Ribonucleoside-diphosphate reductase large subunit (R1) (EC 1.17.4.1) (Ribonucleotide reductase large... ma-jd-viral-14286
Small capsomere-interacting protein ma-jd-viral-52872
Tegument protein ma-jd-viral-01769
Tegument protein ma-jd-viral-02677
Tegument protein ma-jd-viral-12403
Tegument protein ma-jd-viral-14871
Terminase subunit ma-jd-viral-61462
Thymidine kinase ma-jd-viral-05865
Transcriptional control protein ma-jd-viral-04964
Transcriptional control protein ma-jd-viral-15557
Uracil DNA glycosylase ma-jd-viral-07762
VBcl-2 ma-jd-viral-06289
dUTPase ma-jd-viral-12803
ribonucleoside-diphosphate reductase (EC 1.17.4.1) ma-jd-viral-05504

Ovine gammaherpesvirus 2 taxid:10398

Protein ModelArchive
Capsid scaffolding protein (Protease precursor) (pPR) ma-jd-viral-12509
Cytoplasmic envelopment protein 3 ma-jd-viral-36423
DNA polymerase (EC 2.7.7.7) ma-jd-viral-17266
Deoxyuridine triphosphatase-like protein (ORF54) ma-jd-viral-12799
Glycoprotein L-like protein (ORF47) ma-jd-viral-03921
Minor capsid protein-like protein (ORF26) ma-jd-viral-04767
Minor capsid protein-like protein (ORF43) ma-jd-viral-59288
ORF10 ma-jd-viral-12790
ORF11 ma-jd-viral-12710
ORF17.5 ma-jd-viral-52951
ORF18 ma-jd-viral-54800
ORF19 ma-jd-viral-01779
ORF20 ma-jd-viral-12116
ORF21 ma-jd-viral-05869
ORF22 ma-jd-viral-16883
ORF23 ma-jd-viral-11000
ORF24 ma-jd-viral-50954
ORF27 ma-jd-viral-52483
ORF29 ma-jd-viral-06534
ORF30 ma-jd-viral-52806
ORF31 ma-jd-viral-51389
ORF32 ma-jd-viral-02100
ORF33 ma-jd-viral-02690
ORF34 ma-jd-viral-36715
ORF35 ma-jd-viral-14617
ORF36 ma-jd-viral-24744
ORF37 ma-jd-viral-08478
ORF39 ma-jd-viral-37878
ORF40 ma-jd-viral-17360
ORF42 ma-jd-viral-14106
ORF44 ma-jd-viral-37582
ORF45 ma-jd-viral-62380
ORF46 (Uracil-DNA glycosylase-like protein) ma-jd-viral-07723
ORF48 ma-jd-viral-14039
ORF49 ma-jd-viral-04969
ORF50 ma-jd-viral-36973
ORF52 ma-jd-viral-07459
ORF53 ma-jd-viral-38366
ORF56 ma-jd-viral-33330
ORF57 (Post transcriptional control protein-like protein) ma-jd-viral-15553
ORF58 ma-jd-viral-02365
ORF59 ma-jd-viral-21496
ORF62 ma-jd-viral-09164
ORF63 ma-jd-viral-14860
ORF66 ma-jd-viral-21394
ORF67 (Tegument protein-like protein) ma-jd-viral-12401
ORF67a ma-jd-viral-51034
ORF69 ma-jd-viral-10274
ORF7 ma-jd-viral-61490
ORF73 ma-jd-viral-35164
ORF8 ma-jd-viral-31227
ORFO8.5 ma-jd-viral-51624
Ov10 protein ma-jd-viral-50637
Ov2 protein ma-jd-viral-12264
Ov3 protein ma-jd-viral-54626
Ov3.5 ma-jd-viral-44624
Ov4.5 protein ma-jd-viral-06288
Ov5 protein ma-jd-viral-18461
Ov6 protein ma-jd-viral-01798
Ov7 (Ov7 protein) ma-jd-viral-52733
Ov8 protein ma-jd-viral-48545
Ov9 protein ma-jd-viral-04755
Packaging protein UL32 ma-jd-viral-40980
Ribonucleoside-diphosphate reductase large subunit (R1) (EC 1.17.4.1) (Ribonucleotide reductase large... ma-jd-viral-14308
Small capsomere-interacting protein ma-jd-viral-29507
Viral interleukin-10 homolog ma-jd-viral-13430
ribonucleoside-diphosphate reductase (EC 1.17.4.1) ma-jd-viral-05435