Caulimoviridae (taxid:186534)

VIRION

image

Virions not enveloped, bacilliform (30 x 60-900 nm) or isometric (45-50 nm in diameter).

GENOME

Monopartite, open circular, double stranded DNA of 7000-8200 base pairs with discontinuities in both strands: one in the transcribed strand and one to three in the non-transcribed strand. Encode for 1 to 8 proteins.

GENE EXPRESSION

The genome encodes a genomic mRNA, which may be alternatively spliced in some genera. The genomic mRNA generally encodes multiple ORFs expressed by ribosomal shunt.

ENZYMES

REPLICATION

CYTOPLASMIC / NUCLEAR

  1. Attachment of viral proteins to host receptors mediates entry into the host cell.
  2. The viral dsDNA is released into the nucleus.
  3. Transcribed by host RNA polymerase II.
  4. mRNA translation produces viral proteins.
  5. Genomic RNA is retrotranscribed into new dsDNA genomes in the cytoplasm.
  6. Genomes are encapsidated by the capsid protein and form new virions.
  7. The virion infects either a new cell by plasmodesmata movement, or by insect vector uptake.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

79 entries grouped by strain

9 entries

Soybean chlorotic mottle virus reference strain

Select_allDeselect_all
CAPSD_SOCMV Capsid protein (CP) (Coat protein)
IBMP_SOCMV Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)
POL_SOCMV Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse ...
MVP_SOCMV Movement protein (Mov) (Cell-to-cell transport protein) (ORF IA)
Y2_SOCMV Uncharacterized protein 2
Y1B_SOCMV Uncharacterized protein 1b
Y3_SOCMV Uncharacterized protein 3
Y7_SOCMV Uncharacterized protein 7
Y8_SOCMV Uncharacterized protein 8

7 entries

Cestrum yellow leaf curling virus (CmYLCV) reference strain

Select_allDeselect_all
POL_CYLCV Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse ...
CAPSD_CYLCV Capsid protein (CP) (coat protein)
IBMP_CYLCV Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)
MVP_CYLCV Putative movement protein (Mov) (Cell-to-cell transport protein)
Y3_CYLCV Uncharacterized protein 3
Y2_CYLCV Uncharacterized protein 2
Y1A_CYLCV Uncharacterized protein 1a

6 entries

Carnation etched ring virus (CERV) reference strain

Select_allDeselect_all
CAPSD_CERV Probable capsid protein (CP) (Coat protein)
POL_CERV Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse ...
MVP_CERV Movement protein (Mov) (Cell-to-cell transport protein)
VAT_CERV Aphid transmission protein (Atf) (Protein 2)
VAP_CERV Virion-associated protein (Vap) (Protein 3) (P3)
IBMP_CERV Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)

6 entries

Cauliflower mosaic virus (strain Strasbourg) (CaMV) reference strain

Select_allDeselect_all
VAP_CAMVS Virion-associated protein (Vap) (Protein 3) (P3)
CAPSD_CAMVS Capsid protein (CP) (Coat protein)
POL_CAMVS Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse ...
MVP_CAMVS Movement protein (MP) (Cell-to-cell transport protein)
VAT_CAMVS Aphid transmission protein (Atf) (Protein 2)
IBMP_CAMVS Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)

6 entries

Figwort mosaic virus (strain DxS) (FMV) reference strain

Select_allDeselect_all
CAPSD_FMVD Probable capsid protein (CP) (Coat protein)
POL_FMVD Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse ...
MVP_FMVD Movement protein (Mov) (Cell-to-cell transport protein)
VAT_FMVD Aphid transmission protein (Atf) (Protein 2)
VAP_FMVD Virion-associated protein (Vap) (Protein 3) (P3)
IBMP_FMVD Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)

5 entries

Cassava vein mosaic virus (CsVMV) reference strain

Select_allDeselect_all
POL_CSVMV Putative enzymatic polyprotein [Includes: Protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) ...
CP_CSVMV Putative Polyprotein CP [Cleaved into: Capsid protein (Coat protein) (CP); Movement protein (Mov) ...
IBMP_CSVMV Putative transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)
YP06_CSVMV Uncharacterized 6 kDa protein
YP09_CSVMV Uncharacterized 9 kDa protein

4 entries

Rice tungro bacilliform virus (isolate Philippines) (RTBV) reference strain

Select_allDeselect_all
POL_RTBVP Polyprotein P3 (P194 protein) [Cleaved into: Putative movement protein (MP); Capsid protein (Coat ...
P2_RTBVP Protein P2 (ORF 2) (P12)
P1_RTBVP Protein P1 (ORF 1) (P24)
P4_RTBVP Protein P4 (ORF 4) (P46)

3 entries

Commelina yellow mottle virus (CoYMV) reference strain

Select_allDeselect_all
POL_COYMV Polyprotein P3 [Includes: Putative movement protein (MP); Capsid protein (Coat protein) (CP); ...
YOR1_COYMV Uncharacterized 23 kDa protein (ORF1)
YOR2_COYMV Uncharacterized 15 kDa protein (ORF2)

1 entry

Petunia vein clearing virus (isolate Shepherd) (PVCV) reference strain

POLG_PVCV1 Genome polyprotein [Includes: Aspartic protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC ...

6 entries

Cauliflower mosaic virus (strain BBC) (CaMV)

Select_allDeselect_all
CAPSD_CAMVE Capsid protein (CP) (Coat protein)
IBMP_CAMVE Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)
POL_CAMVE Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse ...
VAT_CAMVE Aphid transmission protein (Atf) (Protein 2)
VAP_CAMVE Virion-associated protein (Vap) (Protein 3) (P3)
MVP_CAMVE Movement protein (Mov) (Cell-to-cell transport protein)

6 entries

Cauliflower mosaic virus (strain CM-1841) (CaMV)

Select_allDeselect_all
CAPSD_CAMVC Capsid protein (CP) (Coat protein)
POL_CAMVC Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse ...
MVP_CAMVC Movement protein (Mov) (Cell-to-cell transport protein)
VAT_CAMVC Aphid transmission protein (Atf) (Protein 2)
VAP_CAMVC Virion-associated protein (Vap) (Protein 3) (P3)
IBMP_CAMVC Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)

6 entries

Cauliflower mosaic virus (strain D/H) (CaMV)

Select_allDeselect_all
CAPSD_CAMVD Capsid protein (CP) (Coat protein)
POL_CAMVD Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse ...
MVP_CAMVD Movement protein (Mov) (Cell-to-cell transport protein)
VAT_CAMVD Aphid transmission protein (Atf) (Protein 2)
VAP_CAMVD Virion-associated protein (Vap) (Protein 3) (P3)
IBMP_CAMVD Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)

6 entries

Cauliflower mosaic virus (strain NY8153) (CaMV)

Select_allDeselect_all
CAPSD_CAMVN Capsid protein (CP) (Coat protein)
IBMP_CAMVN Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)
POL_CAMVN Enzymatic polyprotein [Includes: Aspartic protease (EC 3.4.23.-); Endonuclease; Reverse ...
VAT_CAMVN Aphid transmission protein (Atf) (Protein 2)
MVP_CAMVN Movement protein (Mov) (Cell-to-cell transport protein)
VAP_CAMVN Virion-associated protein (Vap) (Protein 3) (P3)

2 entries

Cauliflower mosaic virus (strain PV147) (CaMV)

Select_allDeselect_all
IBMP_CAMVP Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)
VAT_CAMVP Aphid transmission protein (Atf) (Protein 2)

2 entries

Cauliflower mosaic virus (strain W260) (CaMV)

Select_allDeselect_all
MVP_CAMVW Movement protein (Mov) (Cell-to-cell transport protein)
IBMP_CAMVW Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)

1 entry

Cauliflower mosaic virus (strain Bari 1) (CaMV)

IBMP_CAMVB Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)

1 entry

Cauliflower mosaic virus (strain D4) (CaMV)

IBMP_CAMV4 Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)

1 entry

Cauliflower mosaic virus (strain S-Japan) (CaMV)

IBMP_CAMVJ Transactivator/viroplasmin protein (Tav) (Inclusion body matrix protein)

1 entry

Petunia vein clearing virus (isolate Hohn) (PVCV)

POLG_PVCV2 Genome polyprotein [Includes: Aspartic protease (PR) (EC 3.4.23.-); Reverse transcriptase (RT) (EC ...
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Atractylodes mild mottle virus taxid:1711685

Protein ModelArchive
Aphid transmission protein (Atf) (Protein 2) ma-jd-viral-43190
Coat protein ma-jd-viral-30386
Enzymatic polyprotein (EC 2.7.7.49) ma-jd-viral-66572
Movement protein (Cell-to-cell transport protein) ma-jd-viral-27777
Transactivator/viroplasmin protein (Inclusion body matrix protein) ma-jd-viral-11136
Virion-associated protein (Protein 3) ma-jd-viral-31553

Badnavirus maculakalanchoes taxid:3051985

Protein ModelArchive
Uncharacterized protein ma-jd-viral-03110
Uncharacterized protein ma-jd-viral-06000

Banana streak CA virus taxid:1016852

Protein ModelArchive
Uncharacterized protein ma-jd-viral-03113
Virion associated protein ma-jd-viral-05994

Banana streak GF virus taxid:328670

Protein ModelArchive
ORF1 ma-jd-viral-03118
ORFII ma-jd-viral-05991

Banana streak IM virus taxid:1016853

Protein ModelArchive
Uncharacterized protein ma-jd-viral-03117
Virion-associated protein ma-jd-viral-05998

Banana streak MY virus taxid:1476909

Protein ModelArchive
ORF I protein ma-jd-viral-03120
ORF II (Virion associated protein) ma-jd-viral-05999

Banana streak UA virus taxid:1016854

Protein ModelArchive
P24 ma-jd-viral-03119
Virion associated protein ma-jd-viral-54427

Banana streak UI virus taxid:1016855

Protein ModelArchive
Uncharacterized protein ma-jd-viral-03106
Virion associated protein ma-jd-viral-54425

Banana streak UL virus taxid:1016856

Protein ModelArchive
P24 ma-jd-viral-03107
Virion associated protein ma-jd-viral-54426

Banana streak UM virus taxid:1016857

Protein ModelArchive
P24 ma-jd-viral-03111
Virion associated protein ma-jd-viral-54424

Banana streak VN virus taxid:1411991

Protein ModelArchive
Uncharacterized protein ma-jd-viral-03105
Uncharacterized protein ma-jd-viral-05988

Banana streak virus Acuminata Yunnan taxid:334778

Protein ModelArchive
ORFI ma-jd-viral-03109
ORFII ma-jd-viral-05989

Cacao mild mosaic virus taxid:1940252

Protein ModelArchive
P1 protein ma-jd-viral-03093
Uncharacterized protein ma-jd-viral-06004
Uncharacterized protein ma-jd-viral-66245

Cycad leaf necrosis virus taxid:549205

Protein ModelArchive
ORF1 ma-jd-viral-03115
ORF2 ma-jd-viral-06001

Dahlia mosaic virus taxid:213888

Protein ModelArchive
Aphid transmission protein (Atf) (Protein 2) ma-jd-viral-43187
Coat protein ma-jd-viral-30381
Enzymatic polyprotein (EC 2.7.7.49) ma-jd-viral-66574
Movement protein (Cell-to-cell transport protein) ma-jd-viral-27781
Transactivator/viroplasmin protein (Inclusion body matrix protein) ma-jd-viral-11134
Uncharacterized protein ma-jd-viral-41822
Virion-associated protein (Protein 3) ma-jd-viral-32800

Dioscorea bacilliform virus taxid:52996

Protein ModelArchive
ORF1 protein ma-jd-viral-03102

Dracaena mottle virus taxid:380669

Protein ModelArchive
Uncharacterized protein ma-jd-viral-01516
Uncharacterized protein ma-jd-viral-03089
Uncharacterized protein ma-jd-viral-06020
Uncharacterized protein ma-jd-viral-46214
Uncharacterized protein ma-jd-viral-40352
Uncharacterized protein ma-jd-viral-65193

Fig badnavirus 1 taxid:1034096

Protein ModelArchive
DNA-binding protein ma-jd-viral-06006
Uncharacterized protein ma-jd-viral-03073

Gooseberry vein banding associated virus taxid:157270

Protein ModelArchive
P2 ma-jd-viral-06021
Uncharacterized protein ma-jd-viral-47160

Grapevine Roditis leaf discoloration-associated virus taxid:1471299

Protein ModelArchive
P2 ma-jd-viral-06002
Uncharacterized protein ma-jd-viral-03077
Uncharacterized protein ma-jd-viral-12028

Grapevine vein clearing virus taxid:1050407

Protein ModelArchive
Uncharacterized protein ma-jd-viral-06024
Uncharacterized protein ma-jd-viral-47162

Hibiscus bacilliform virus GD1 taxid:1459800

Protein ModelArchive
Polyprotein ma-jd-viral-12027
Uncharacterized protein ma-jd-viral-03096
Uncharacterized protein ma-jd-viral-06008

Horseradish latent virus taxid:264076

Protein ModelArchive
Aphid transmission protein (Atf) (Protein 2) ma-jd-viral-43189
Coat protein ma-jd-viral-30384
Coat protein ma-jd-viral-57784
Enzymatic polyprotein (EC 2.7.7.49) ma-jd-viral-66562
Movement protein (Cell-to-cell transport protein) ma-jd-viral-27778
Ovule protein ma-jd-viral-47708
Transactivator/viroplasmin protein (Inclusion body matrix protein) ma-jd-viral-11137
Virion-associated protein (Protein 3) ma-jd-viral-32801

Lamium leaf distortion virus taxid:515320

Protein ModelArchive
Aphid transmission protein (Atf) (Protein 2) ma-jd-viral-43186
Coat protein ma-jd-viral-30387
Enzymatic polyprotein (EC 2.7.7.49) ma-jd-viral-66569
Movement protein (Cell-to-cell transport protein) ma-jd-viral-27784
Transactivator/viroplasmin protein (Inclusion body matrix protein) ma-jd-viral-11133
Virion-associated protein (Protein 3) ma-jd-viral-31552

Mulberry badnavirus 1 taxid:1227557

Protein ModelArchive
Uncharacterized protein ma-jd-viral-12025

Pagoda yellow mosaic associated virus taxid:1505530

Protein ModelArchive
Uncharacterized protein ma-jd-viral-01514
Uncharacterized protein ma-jd-viral-06022
Uncharacterized protein ma-jd-viral-34691
Uncharacterized protein ma-jd-viral-46382

Peanut chlorotic streak virus taxid:35593

Protein ModelArchive
Coat protein ma-jd-viral-30383
Putative cell-to-cell transport protein ma-jd-viral-27782
RNA-directed DNA polymerase (EC 2.7.7.49) ma-jd-viral-66570
Transactivator/viroplasmin protein (Inclusion body matrix protein) ma-jd-viral-11130

Pelargonium vein banding virus taxid:671126

Protein ModelArchive
P1 ma-jd-viral-03076
Uncharacterized protein ma-jd-viral-06005

Piper yellow mottle virus taxid:262957

Protein ModelArchive
ORF1 ma-jd-viral-03084
ORF2 ma-jd-viral-06003
ORF4 ma-jd-viral-29450

Rose yellow vein virus taxid:1213588

Protein ModelArchive
AC5 protein ma-jd-viral-33275
Coat protein ma-jd-viral-30380
Movement protein ma-jd-viral-28947
RNA-directed DNA polymerase (EC 2.7.7.49) ma-jd-viral-66563
Transactivator/viroplasmin protein (Inclusion body matrix protein) ma-jd-viral-60735
Uncharacterized protein ma-jd-viral-50478
Uncharacterized protein ma-jd-viral-49537
Uncharacterized protein ma-jd-viral-58383

Rubus yellow net virus taxid:198310

Protein ModelArchive
Coat protein ma-jd-viral-41846
Secreted protein ma-jd-viral-34114
Uncharacterized protein ma-jd-viral-06025
Uncharacterized protein ma-jd-viral-47163

Rudbeckia flower distortion virus taxid:587370

Protein ModelArchive
Coat protein ma-jd-viral-30385
Putative cell-to-cell movement protein ma-jd-viral-27785
Putative translational transactivator ma-jd-viral-11129
RNA-directed DNA polymerase (EC 2.7.7.49) ma-jd-viral-66566
Uncharacterized protein ma-jd-viral-32055
Uncharacterized protein ma-jd-viral-55438
Uncharacterized protein ma-jd-viral-59405

Soybean Putnam virus taxid:1221449

Protein ModelArchive
Aphid transmission protein (Atf) (Protein 2) ma-jd-viral-43188
Coat protein ma-jd-viral-30377
Enzymatic polyprotein (EC 2.7.7.49) ma-jd-viral-66571
Movement protein (Cell-to-cell transport protein) ma-jd-viral-27783
Transactivator/viroplasmin protein (Inclusion body matrix protein) ma-jd-viral-11132
Virion-associated protein (Protein 3) ma-jd-viral-31554

Strawberry vein banding virus taxid:47903

Protein ModelArchive
Aphid transmission protein (Atf) (Protein 2) ma-jd-viral-52158
Coat protein ma-jd-viral-30379
Enzymatic polyprotein (EC 2.7.7.49) ma-jd-viral-66565
Movement protein (Cell-to-cell transport protein) ma-jd-viral-27786
ORF VI protein ma-jd-viral-11139
Virion-associated protein (Protein 3) ma-jd-viral-64715

Sugarcane bacilliform Guadeloupe D virus taxid:1960253

Protein ModelArchive
ORF1 protein ma-jd-viral-03099
ORF2 protein ma-jd-viral-05995

Sweet potato badnavirus B taxid:647294

Protein ModelArchive
P1 ma-jd-viral-03095
Polyprotein ma-jd-viral-33383
Polyprotein ma-jd-viral-59449
RNA-directed DNA polymerase (EC 2.7.7.49) ma-jd-viral-66568
Uncharacterized protein ma-jd-viral-06027

Sweet potato collusive virus taxid:930168

Protein ModelArchive
Coat protein/movement protein ma-jd-viral-46551
Putative inclusion body protein ma-jd-viral-11140
RNA-directed DNA polymerase (EC 2.7.7.49) ma-jd-viral-66576

Sweet potato vein clearing virus taxid:995049

Protein ModelArchive
Coat protein ma-jd-viral-45787
Movement protein ma-jd-viral-27870
Phage protein ma-jd-viral-41293
Plasmodium RESA N-terminal domain-containing protein ma-jd-viral-43182
Putative inclusion body protein ma-jd-viral-49059
RNA-directed DNA polymerase (EC 2.7.7.49) ma-jd-viral-66564
Uncharacterized protein ma-jd-viral-53310
Uncharacterized protein ma-jd-viral-41472
Uncharacterized protein ma-jd-viral-62045

Taro bacilliform CH virus taxid:1634914

Protein ModelArchive
Polyprotein ma-jd-viral-50242
Uncharacterized protein ma-jd-viral-03103
Uncharacterized protein ma-jd-viral-05987
Uncharacterized protein ma-jd-viral-32218
Uncharacterized protein ma-jd-viral-56469

Water chestnut soymovirus 1 taxid:1848040

Protein ModelArchive
Capsid protein ma-jd-viral-32301
Coat protein ma-jd-viral-30378
P10 ma-jd-viral-51496
Putative movement protein ma-jd-viral-27780
Putative translational transactivator ma-jd-viral-11131
RNA-directed DNA polymerase (EC 2.7.7.49) ma-jd-viral-66567
Uncharacterized protein ma-jd-viral-31893
Uncharacterized protein ma-jd-viral-65188
Uncharacterized protein ma-jd-viral-62306

Yacon necrotic mottle virus taxid:1561150

Protein ModelArchive
ORF1 ma-jd-viral-03071
ORF2 ma-jd-viral-06013
ORF4 ma-jd-viral-66244