Aquabirnavirus (taxid:39750)

VIRION

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Non enveloped, single-shelled T=13 icosahedral symmetry capsid of about 70 nm in diameter, composed of 260 trimers of VP2 that form spikes projecting radially from the capsid. The peptides derived from pre-VP2 C-terminal cleavages remain associated within virion. VP3 forms a ribonucleoprotein complex with the genomic RNA. Minor amounts of VP1 are also incorporated in the virion.
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GENOME

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Segmented linear dsRNA genome: 2 segments (A,B) encode for 5 proteins and 3 to 4 small peptides. VP1 is found in a free form and covalently attached at the 5' genomic RNA end (VPg). Segments size is about 2.7-3 kb. Genome total size is about 6 kb.

GENE EXPRESSION

Genomic segment A encodes for a structural polyprotein which is matured in cis by VP4. It also encodes an alternative ORF translated possibly by leaky scanning (VP5).
Genomic segment B encodes for VP1.

ENZYMES

REPLICATION

CYTOPLASMIC

  1. Virus penetrates into the cytoplasm.
  2. Transcription of the dsRNA genome by viral polymerase occurs inside the virion, so that dsRNA is never exposed to the cytoplasm. This plus-strand transcript is used as template for translation.
  3. (+)RNAs are encapsidated in virion particle, inside which they are transcribed to give RNA (-) molecules with which they become base-paired to produce dsRNA genomes.
  4. Mature virions are released by budding.

Host-virus interaction

Host transcription modulation

Apoptosis modulation

IPNV induces host cell apoptosis via Bad up-regulation . Also induces caspases activation (caspase-3 and caspase-9) .
IPNV would trigger two separate death pathways via upregulation of TNF-alpha, namely the Bad-mediates apoptosis and the Rip1/ROS-mediated secondary necrotic pathway .
Upregulation of TNF-alpha may be linked to the observed NF-kappaB transcription

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

8 entries grouped by protein

3 entries

Structural polyprotein (PP)

Select_allDeselect_all
POLS_IPNVJ
Infectious pancreatic necrosis virus (strain Jasper) (IPNV) reference strain
POLS_IPNVS
Infectious pancreatic necrosis virus (strain Sp) (IPNV) reference strain
POLS_IPNVN
Infectious pancreatic necrosis virus (strain N1) (IPNV)

2 entries

RNA-directed RNA polymerase (RDRP) (EC 2.7.7.48) (Protein VP1)

Select_allDeselect_all
RDRP_IPNVJ
Infectious pancreatic necrosis virus (strain Jasper) (IPNV) reference strain
RDRP_IPNVS
Infectious pancreatic necrosis virus (strain Sp) (IPNV) reference strain

3 entries

Protein VP5

Select_allDeselect_all
VP5_IPNVJ
Infectious pancreatic necrosis virus (strain Jasper) (IPNV) reference strain
VP5_IPNVN
Infectious pancreatic necrosis virus (strain N1) (IPNV)
VP5_IPNVS
Infectious pancreatic necrosis virus (strain Sp) (IPNV)