Orbivirus

Molecular biology

VIRION

Non enveloped, icosahedral, non-turreted virion with a triple capsid structure, about 80 nm in diameter. The intermediate capsid has an icosahedral T=13 symmetry, the inner capsid an icosahedral symmetry T=2.

Virion maturation schemes
Virion structure at ViperDB

GENOME

Segmented dsRNA linear genome. Contains 10 segments coding for 12 proteins. Segments size range from 822 to 3,954 bp (BTV). Genome total size is 19,200 bp (BTV).

GENE EXPRESSION

The dsRNA genome is never completely uncoated, to prevent activation of antiviral state by the cell in response of dsRNA. The viral polymerase VP1 synthesizes a capped mRNA from each dsRNA segment. This capped mRNA is translocated to the cell cytoplasm where it is translated.

REPLICATION

CYTOPLASMIC

  1. Virus attaches to host receptors and is endocytosed into vesicles in the host cell.
  2. Particles are partially uncoated in endolysosomes, but not entirely, and penetrates in the cytoplasm.
  3. Early transcription of the dsRNA genome by viral polymerase occurs inside this sub-viral particle (naked core), so that dsRNA is never exposed to the cytoplasm. Full-length plus-strand transcripts from each of the dsRNA segments are synthesized. These plus-strand transcripts are used as templates for translation.
  4. (+)RNAs are encapsidated in a sub-viral particle, inside which they are transcribed to give RNA (-) molecules with which they become base-paired to produce dsRNA genomes.
  5. The capsid is assembled on the sub-viral particle.
  6. Mature virions are released presumably following cell death and associated breakdown of host plasma membrane.

Matching UniProtKB/Swiss-Prot entries

100 entries grouped by protein

All proteins are shown (view only 11 complete proteome entries)

RNA-directed RNA polymerase (EC 2.7.7.48) (VP1)

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RDRP_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain
RDRP_AHSV9African horse sickness virus 9 (AHSV-9)

Non-structural protein NS1

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VNS1_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain
VNS1_AHSV4African horse sickness virus 4 (AHSV-4)

Non-structural protein NS1 (Hydrophobic tubular protein)

VNS1_AHSV6African horse sickness virus 6 (AHSV-6)
VNS1_AHSV9African horse sickness virus 9 (AHSV-9)
VNS1_BTV1ABluetongue virus 1 (isolate Australia) (BTV 1)
VNS1_BTV1SBluetongue virus 1 (isolate South Africa) (BTV 1)
VNS1_BTV11Bluetongue virus 11 (isolate USA) (BTV 11)
VNS1_BTV13Bluetongue virus 13 (isolate USA) (BTV 13)
VNS1_BTV17Bluetongue virus 17 (isolate USA) (BTV 17)
VNS1_BTV2ABluetongue virus 2 (isolate USA) (BTV 2)
VNS1_BTV20Bluetongue virus 20 (isolate Australia) (BTV 20)
VNS1_EHDV2Epizootic hemorrhagic disease virus 2 (strain Alberta) (EHDV-2)

Non-structural protein NS1 (Hydrophobic tubular protein)

Non-structural protein NS2

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VNS2_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain
VNS2_AHSV9African horse sickness virus 9 (AHSV-9)
VNS2_BTV1SBluetongue virus 1 (isolate South Africa) (BTV 1)
VNS2_BTV1XBluetongue virus 10 (BTV 10)
VNS2_BTV17Bluetongue virus 17 (isolate USA) (BTV 17)
VNS2_EHDV2Epizootic hemorrhagic disease virus 2 (strain Alberta) (EHDV-2)

Non-structural protein NS3

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VNS3_AHSV1African horse sickness virus 1 (AHSV-1)
VNS3_AHSV2African horse sickness virus 2 (AHSV-2)
VNS3_AHSV3African horse sickness virus 3 (AHSV-3)
VNS3_AHSV4African horse sickness virus 4 (AHSV-4)
VNS3_AHSV5African horse sickness virus 5 (AHSV-5)
VNS3_AHSV6African horse sickness virus 6 (AHSV-6)
VNS3_AHSV7African horse sickness virus 7 (AHSV-7)
VNS3_AHSV8African horse sickness virus 8 (AHSV-8)
VNS3_AHSV9African horse sickness virus 9 (AHSV-9)
VNS3_BRDBroadhaven virus (BRD)

Outer capsid protein VP2

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VP2_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain
VP2_AHSV3African horse sickness virus 3 (AHSV-3)
VP2_AHSV4African horse sickness virus 4 (AHSV-4)
VP2_AHSV6African horse sickness virus 6 (AHSV-6)
VP2_BTV1ABluetongue virus 1 (isolate Australia) (BTV 1)
VP2_BTV1VBluetongue virus 1 (isolate South Africa vaccine) (BTV 1)
VP2_BTV1SBluetongue virus 1 (isolate South Africa) (BTV 1)
VP2_BTV11Bluetongue virus 11 (isolate USA) (BTV 11)
VP2_BTV13Bluetongue virus 13 (isolate USA) (BTV 13)
VP2_BTV17Bluetongue virus 17 (isolate USA) (BTV 17)
VP2_BTV3VBluetongue virus 3 (isolate South Africa vaccine) (BTV 3)
VP2_BRDBroadhaven virus (BRD)

Structural core protein VP2

VP2_EHDV1Epizootic hemorrhagic disease virus 1 (EHDV-1)

Core protein VP3 (Major inner capsid protein)

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VP3_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain
VP3_AHSV4African horse sickness virus 4 (AHSV-4)

Core protein VP3

VP3_AHSV6African horse sickness virus 6 (AHSV-6)

Core protein VP3

VP3_BTV1ABluetongue virus 1 (isolate Australia) (BTV 1)
VP3_BTV1SBluetongue virus 1 (isolate South Africa) (BTV 1)
VP3_BTV11Bluetongue virus 11 (isolate USA) (BTV 11)
VP3_BTV13Bluetongue virus 13 (isolate USA) (BTV 13)
VP3_BTV17Bluetongue virus 17 (isolate USA) (BTV 17)
VP3_BTV2ABluetongue virus 2 (isolate USA) (BTV 2)
VP3_EHDV1Epizootic hemorrhagic disease virus 1 (EHDV-1)

Core protein VP3

VP3_EHDVAEpizootic hemorrhagic disease virus 2 (strain Australia) (EHDV-2)

Core protein VP3

Core protein VP4

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VP4_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain
VP4_AHSV4African horse sickness virus 4 (AHSV-4)

Core protein VP4 (Inner capsid protein VP4)

VP4_BTV11Bluetongue virus 11 (isolate USA) (BTV 11)
VP4_BTV13Bluetongue virus 13 (isolate USA) (BTV 13)
VP4_BTV2ABluetongue virus 2 (isolate USA) (BTV 2)

Outer capsid protein VP5

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VP5_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain
VP5_AHSV4African horse sickness virus 4 (AHSV-4)
VP5_AHSV6African horse sickness virus 6 (AHSV-6)
VP5_AHSV9African horse sickness virus 9 (AHSV-9)
VP5_BTV1ABluetongue virus 1 (isolate Australia) (BTV 1)
VP5_BTV1SBluetongue virus 1 (isolate South Africa) (BTV 1)
VP5_BTV11Bluetongue virus 11 (isolate USA) (BTV 11)
VP5_BTV13Bluetongue virus 13 (isolate USA) (BTV 13)
VP5_BTV17Bluetongue virus 17 (isolate USA) (BTV 17)
VP5_BTV2ABluetongue virus 2 (isolate USA) (BTV 2)
VP5_BRDBroadhaven virus (BRD)
VP5_EHDV1Epizootic hemorrhagic disease virus 1 (EHDV-1)

Protein VP6 (Minor inner core protein VP6)

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VP6_AHSV3African horse sickness virus 3 (AHSV-3)
VP6_AHSV6African horse sickness virus 6 (AHSV-6)
VP6_BTV1SBluetongue virus 1 (isolate South Africa) (BTV 1)
VP6_BTV11Bluetongue virus 11 (isolate USA) (BTV 11)
VP6_BTVBZBluetongue virus 13 (isolate 13B89Z) (BTV 13)
VP6_BTV13Bluetongue virus 13 (isolate USA) (BTV 13)
VP6_BTV17Bluetongue virus 17 (isolate USA) (BTV 17)
VP6_BTV2ABluetongue virus 2 (isolate USA) (BTV 2)

Protein VP6-A (Minor inner core protein VP6-A)


VP6A_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain

Protein VP6-B (Minor inner core protein VP6-B)


VP6B_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain

Core protein VP7

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VP7_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain
VP7_AHSV4African horse sickness virus 4 (AHSV-4)

Core protein VP7 (Capsid protein VP7) (VP7 antigen)

VP7_AHSV6African horse sickness virus 6 (AHSV-6)

Core protein VP7 (Capsid protein VP7) (VP7 antigen)

VP7_AHSV9African horse sickness virus 9 (AHSV-9)

Core protein VP7 (Capsid protein VP7) (VP7 antigen)

VP7_BTV1ABluetongue virus 1 (isolate Australia) (BTV 1)
VP7_BTV1SBluetongue virus 1 (isolate South Africa) (BTV 1)
VP7_BTV11Bluetongue virus 11 (isolate USA) (BTV 11)
VP7_BTV13Bluetongue virus 13 (isolate USA) (BTV 13)
VP7_BTV17Bluetongue virus 17 (isolate USA) (BTV 17)
VP7_BTV2ABluetongue virus 2 (isolate USA) (BTV 2)
VP7_BRDBroadhaven virus (BRD)
VP7_EHDV1Epizootic hemorrhagic disease virus 1 (EHDV-1)

Non-structural protein P8 (Non-structural protein NS3)

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VP8_BTV10Bluetongue virus 10 (isolate USA) (BTV 10) reference strain
VP8_BTV1ABluetongue virus 1 (isolate Australia) (BTV 1)
VP8_BTV1SBluetongue virus 1 (isolate South Africa) (BTV 1)
VP8_BTV11Bluetongue virus 11 (isolate USA) (BTV 11)
VP8_BTV13Bluetongue virus 13 (isolate USA) (BTV 13)
VP8_BTV17Bluetongue virus 17 (isolate USA) (BTV 17)
VP8_BTV2ABluetongue virus 2 (isolate USA) (BTV 2)