Alloherpesviridae

Molecular biology

VIRION

Enveloped, spherical to pleomorphic, 150-200 nm in diameter, T=16 icoseadral symmetry. Capsid consists of 162 capsomers. Glycoproteins complexes are embeded in the lipid envelope.

GENOME

Monopartite, linear, dsDNA genome of 134 kb. The genome contains terminal and internal reiterated sequences.

GENE EXPRESSION

Each viral transcript usually encodes a single protein and has a promoter/regulatory sequence, a TATA box, a transcription initiation site, a 5’ leader sequence of 30-300 bp (not translated), a 3’ nontranslated sequence of 10-30 bp, and a poly A signal. There are many gene overlaps. There are only few spliced genes. Some of the expressed ORFs are antisense to each other. Some ORFs can be accessed from more than one promoter. There are some non-coding genes.

REPLICATION

NUCLEAR

Lytic replication:

  1. Virus attaches to host receptors through gB, gC, gD and gH .
  2. Fusion with the plasma membrane to release the core and the tegument proteins into the host cytoplasm.
  3. The capsid is transported to the nuclear pore where the viral DNA is released into the nucleus.
  4. Transcription of immediate early genes which promote transcription of early genes.
  5. Transcription of early viral mRNA by host polymerase II, transport into the cytoplasm and translation into early proteins.
  6. Early proteins are involved in replication of the viral DNA and are transported back into the nucleus.
  7. Synthesis of multiple copies of viral DNA by the viral DNA-dependent DNA polymerase.
  8. Transcription of late mRNAs by host polymerase II, transport into the cytoplasm and translation into late proteins.
  9. Late proteins are structural or core proteins and are transported back into the nucleus.
  10. Assembly of the virus and budding through the inner lamella of the nuclear membrane which has been modified by the insertion of herpes glycoproteins, throughout the Golgi and final release at the plasma membrane.

Latent replication : replication of circular viral episome in tandem with the host cell DNA using the host cell replication machinery.

Matching UniProtKB/Swiss-Prot entries

76 entries grouped by protein

DNA polymerase (EC 2.7.7.7)


DPOL_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (EC 3.6.1.23) (dUTP pyrophosphatase)


DUT_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Probable ATP-dependent helicase 25 (EC 3.6.4.-)


HELI_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Thymidine kinase (EC 2.7.1.21)


KITH_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Protein kinase ORF14 (EC 2.7.11.1)


KR14_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Protein kinase ORF15 (EC 2.7.11.1)


KR15_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Protein kinase ORF16 (EC 2.7.11.1)


KR16_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Protein kinase ORF73 (EC 2.7.11.1)


KR73_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Protein kinase ORF74 (EC 2.7.11.1)


KR74_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF1


VG01_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF2


VG02_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF3


VG03_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF4


VG04_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative membrane protein ORF6


VG06_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative membrane protein ORF7


VG07_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative membrane protein ORF8


VG08_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative zinc-binding protein ORF9


VG09_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative membrane protein ORF10


VG10_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative zinc-binding protein ORF11


VG11_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative zinc-binding protein ORF12


VG12_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF13


VG13_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF17


VG17_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF18


VG18_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative membrane protein ORF19


VG19_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF20


VG20_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF21


VG21_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF22


VG22_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF23


VG23_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF24


VG24_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF26


VG26_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF27


VG27_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF28


VG28_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF29


VG29_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF30


VG30_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF31


VG31_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF32


VG32_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF33


VG33_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF34


VG34_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF35


VG35_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF36


VG36_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF37


VG37_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF38


VG38_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF39


VG39_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF40


VG40_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF41


VG41_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF42


VG42_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF43


VG43_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF44


VG44_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF45


VG45_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Probable major glycoprotein


VG46_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Subtilisin-like protease (EC 3.4.21.-)


VG47_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF48


VG48_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF50


VG50_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative membrane protein ORF51


VG51_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF52


VG52_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF53


VG53_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF54


VG54_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF55


VG55_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF56


VG56_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative membrane protein ORF59


VG59_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF60


VG60_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF61


VG61_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF63


VG63_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF64


VG64_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF65


VG65_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF66


VG66_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF67


VG67_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF68


VG68_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF70


VG70_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF72


VG72_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF75


VG75_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF76


VG76_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF77


VG77_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Putative zinc-binding protein ORF78


VG78_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Uncharacterized protein ORF79


VG79_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain

Probable DNA-packaging protein (Terminase)


VTER_ICHVAIctalurid herpesvirus 1 (strain Auburn) (IcHV-1) (Channel catfish herpesvirus) reference strain