Phytoreovirus

Molecular biology

VIRION

Non enveloped, icosahedral, non-turreted virion with a double capsid structure, about 70 nm in diameter. The outer capsid has an icosahedral T=13 symmetry, the inner capsid an icosahedral symmetry T=2. Each double-layered capsid consists of 260 trimers of the major outer capsid P8 protein and 60 dimers of the inner capsid P3 protein.

GENOME

Segmented dsRNA linear genome. Contains 12 segments coding for 15 proteins. Segment 11 has two in-frame codons resulting in two ORFs. Segment 12 has two additional overlapping ORFs. Segments size range from 1066 to 4423 bp. Genome total size is about 26 kb (WTV).

GENE EXPRESSION

The dsRNA genome is never completely uncoated, to prevent activation of antiviral state by the cell in response of dsRNA. The viral polymerase synthesizes a capped mRNA from each dsRNA segment. This capped mRNA is translocated to the cell cytoplasm where it is translated.

REPLICATION

CYTOPLASMIC

  1. Virus penetrates into the cytoplasm.
  2. Transcription of the dsRNA genome by viral polymerase occurs inside the virion, so that dsRNA is never exposed to the cytoplasm. This plus-strand transcript is used as template for translation.
  3. (+)RNAs are encapsidated in virion particle, inside which they are transcribed to give RNA (-) molecules with which they become base-paired to produce dsRNA genomes.
  4. Mature virions are released presumably following cell death and associated breakdown of host plasma membrane.

Matching UniProtKB/Swiss-Prot entries

55 entries grouped by protein

All proteins are shown (view only 24 complete proteome entries)

Putative mRNA-capping enzyme P5 (Structural protein 5) (mRNA guanylyltransferase) (EC 2.7.7.50)

Select_all Deselect_all  
MCE_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
MCE_RGDVRice gall dwarf virus (RGDV) reference strain

Putative mRNA-capping enzyme P5 (Structural protein 5) (mRNA guanylyltransferase P5) (EC 2.7.7.50)

MCE_RDVARice dwarf virus (isolate Akita) (RDV)
MCE_WTVWound tumor virus (WTV)

Putative mRNA-capping enzyme P5 (Structural protein 5) (mRNA guanylyltransferase P5) (EC 2.7.7.50)

Movement protein (Non-structural protein 6) (Pns6)

Select_all Deselect_all  
MVP_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
MVP_RGDVRice gall dwarf virus (RGDV) reference strain

Movement protein (Non-structural protein 7) (Pns7)

MVP_RDVARice dwarf virus (isolate Akita) (RDV)

RNA-binding protein (Non-structural protein 12) (Pns12)

Select_all Deselect_all  
NSP11_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain

RNA-binding protein (Non-structural protein 11) (Pns11)

NSP11_RGDVRice gall dwarf virus (RGDV) reference strain
NSP11_RDVARice dwarf virus (isolate Akita) (RDV)

RNA-binding protein (Non-structural protein 11) (Pns11)

NSP11_WTVWound tumor virus (WTV)
NSP11_WTVNJWound tumor virus (strain NJ) (WTV)

Non-structural protein 12A (Pns12A)

Select_all Deselect_all  
NSP12_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
NSP12_RGDVRice gall dwarf virus (RGDV) reference strain

Non-structural protein 9 (Pns9)

NSP12_RDVARice dwarf virus (isolate Akita) (RDV)
NSP12_RDVORice dwarf virus (isolate O) (RDV)

Non-structural protein 4 (Pns4)

Select_all Deselect_all  
NSP4_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
NSP4_RGDVRice gall dwarf virus (RGDV) reference strain
NSP4_RDVARice dwarf virus (isolate Akita) (RDV)
NSP4_WTVWound tumor virus (WTV)

Minor outer capsid protein P2

Select_all Deselect_all  
P2_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
P2_RGDVRice gall dwarf virus (RGDV) reference strain
P2_RDVORice dwarf virus (isolate O) (RDV)

Outer capsid protein P3 (Core protein P3)

Select_all Deselect_all  
P3_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
P3_RGDVRice gall dwarf virus (RGDV) reference strain
P3_RDVARice dwarf virus (isolate Akita) (RDV)

Protein P7 (55 kDa core protein)

Select_all Deselect_all  
P7_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
P7_RGDVRice gall dwarf virus (RGDV) reference strain

Protein P7

P7_RDVARice dwarf virus (isolate Akita) (RDV)
P7_RDVORice dwarf virus (isolate O) (RDV)
P7_WTVWound tumor virus (WTV)

Protein P7 (60 kDa core protein)

P7_WTVNJWound tumor virus (strain NJ) (WTV)

Protein P7 (60 kDa core protein)

Outer capsid protein P8 (Structural protein P8)

Select_all Deselect_all  
P8_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
P8_RGDVRice gall dwarf virus (RGDV) reference strain
P8_RDVARice dwarf virus (isolate Akita) (RDV)
P8_RDVORice dwarf virus (isolate O) (RDV)
P8_RDVSRice dwarf virus (isolate S) (RDV)
P8_WTVWound tumor virus (WTV)

Minor outer capsid protein P9

Select_all Deselect_all  
P9_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
P9_RGDVRice gall dwarf virus (RGDV) reference strain

Minor outer capsid protein P9 (Protein Pns10)

P9_RDVRice dwarf virus (RDV)
P9_RDVARice dwarf virus (isolate Akita) (RDV)
P9_RDVORice dwarf virus (isolate O) (RDV)
P9_WTVWound tumor virus (WTV)

Minor outer capsid protein P9 (Non-structural protein 11) (Pns11)

P9_WTVNJWound tumor virus (strain NJ) (WTV)

Minor outer capsid protein P9 (Non-structural protein 11) (Pns11)

RNA-directed RNA polymerase P1 (EC 2.7.7.48) (Replicase)

Select_all Deselect_all  
RDRP_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
RDRP_RGDVRice gall dwarf virus (RGDV) reference strain
RDRP_RDVARice dwarf virus (isolate Akita) (RDV)

Non-structural protein Pns10


VP10_WTVWound tumor virus (WTV)

Non-structural protein PNS7


VP7_WTVWound tumor virus (WTV)

Suppressor of RNA-mediated gene silencing (Non-structural protein 10) (Pns10)

Select_all Deselect_all  
VSR_RDVFRice dwarf virus (isolate Fujian) (RDV) reference strain
VSR_RGDVRice gall dwarf virus (RGDV) reference strain

Suppressor of RNA-mediated gene silencing (Non-structural protein 11) (Pns11)

VSR_RDVARice dwarf virus (isolate Akita) (RDV)
VSR_RDVORice dwarf virus (isolate O) (RDV)
VSR_WTVWound tumor virus (WTV)