Alphanucleorhabdovirus (taxid:2733245)

VIRION

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Enveloped, bullet shaped. 180 nm long and 75 nm wide. Certain plant rhabdoviruses are bacilliform in shape and almost twice the length.

GENOME

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Negative-stranded RNA linear genome, about 11-15 kb in size. Encodes for 5 to six proteins.

GENE EXPRESSION

The viral RNA dependent RNA polymerase binds the encapsidated genome at the leader region, then sequentially transcribes each genes by recognizing start and stop signals flanking viral genes. mRNAs are capped and polyadenylated by the L protein during synthesis.

ENZYMES

REPLICATION

IN PLANT:NUCLEAR

  1. Virus penetrates into the cell by effraction or plasmodesmata transport.
  2. Viral nucleocapsid is transported into the host nucleus
  3. Sequential transcription , viral mRNAs are capped and polyadenylated by polymerase stuttering in the cytoplasm.
  4. Replication presumably starts when enough nucleoprotein is present to encapsidate neo-synthetized antigenomes and genomes.
  5. The ribonucleocapsid can penetrate in neighboring plant cells through plasmodesmata transport
  6. Alternatively the ribonucleocapsid can binds to the matrix protein and budding of particles occurs at the cell membrane, releasing new virions.

IN INSECT:NUCLEAR

  1. Attachment of the viral G glycoproteins to host receptors.
  2. Fusion of virus membrane with the vesicle membrane; ribonucleocapsid is released into the cytoplasm.
  3. Viral nucleocapsid is transported into the host nucleus
  4. Sequential transcription , viral mRNAs are capped and polyadenylated by polymerase stuttering in the cytoplasm.
  5. Replication presumably starts when enough nucleoprotein is present to encapsidate neo-synthetized antigenomes and genomes.
  6. The ribonucleocapsid binds to the matrix protein and budding of particles occurs at the cell membrane, releasing new virions.

Host-virus interaction

Movement through plasmodesmata

Viral movement protein 3of RYSV presumably interacts with host plasmodesmata to allow tubule guided movement of viral genomic material from cell to cell without budding.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

19 entries grouped by strain

7 entries

Rice yellow stunt virus (RYSV) (Rice transitory yellowing virus) reference strain

Select_allDeselect_all
L_RYSV RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) ...
GLYCO_RYSV Glycoprotein
PHOSP_RYSV Phosphoprotein (Protein P) (Protein M1)
NCAP_RYSV Nucleoprotein (NP) (Nucleocapsid protein) (Protein N)
MVP_RYSV Movement protein (MP) (Cell-to-cell transport protein) (Protein 3)
MATRX_RYSV Matrix protein
VP6_RYSV Protein 6

6 entries

Maize mosaic virus (isolate Maize/United States/Reed/2005) (MMV) reference strain

Select_allDeselect_all
L_MMVR RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) ...
GLYCO_MMVR Glycoprotein
MATRX_MMVR Matrix protein
MVP_MMVR Putative movement protein 3 (MP) (Cell-to-cell transport protein) (Protein 3)
PHOSP_MMVR Phosphoprotein (Protein P) (Protein M1)
NCAP_MMVR Nucleoprotein (NP) (Nucleocapsid protein) (Protein N)

6 entries

Taro vein chlorosis virus (TAVCV) reference strain

Select_allDeselect_all
L_TAVCV RNA-directed RNA polymerase L (Protein L) (Large structural protein) (Replicase) (Transcriptase) ...
GLYCO_TAVCV Glycoprotein
MATRX_TAVCV Matrix protein
MVP_TAVCV Movement protein (MP) (Cell-to-cell transport protein) (Protein 3)
PHOSP_TAVCV Phosphoprotein (Protein P) (Protein M1)
NCAP_TAVCV Nucleoprotein (NP) (Nucleocapsid protein) (Protein N)
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Eggplant mottled dwarf virus taxid:488317

Protein ModelArchive
Glycoprotein ma-jd-viral-47279
Matrix protein ma-jd-viral-11565
Movement protein ma-jd-viral-39855
Nucleoprotein (NP) (Protein N) (Nucleocapsid protein) ma-jd-viral-15064
Phosphoprotein ma-jd-viral-34166
X protein ma-jd-viral-51688