Begomovirus (taxid:10814)

VIRION

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Non-enveloped, about 38 nm in length and 22 nm in diameter (for MSV), twinned (geminate) incomplete T=1 icosahedral symmetry capsid that contains 22 pentameric capsomers made of 110 capsid proteins (CP). Each geminate particle contains only a single circular ssDNA.

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GENOME

Bipartite: components A and B (with some exceptions like TYLCV, ToLCV and AYVV which are monopartite), circular, ssDNA genome (+) of about 2.6 kb per component (5.2 kb in total). 3' terminus has no poly(A) tract. There are coding regions in both the virion (positive) and complementary (negative) sense strands.
The genome is replicated through double-stranded intermediates. The replication (Rep) protein initiates and terminates rolling circle replication, the host DNA polymerase being used for DNA replication itself. There is a potential stem-loop structure in the intergenic region that includes a conserved nonanucleotide sequence (TAATATTAC) where ssDNA synthesis is initiated. Component B is dependent on A for replication. The A and B components each have a common region (CR), which consists of a block of approximately 200bp within the IR and corresponds to the non-coding region common for topocu- and begomoviruses. The common region also contains two divergent promoters which differentially regulate the temporal expression of the viral genes.

GENE EXPRESSION

Transcription is bidirectional from the common region (CR). Proteins are expressed from subgenomic RNAs (sgRNAs). Leaky scanning is probably used for the expression of some of the overlapping proteins.

In bipartite begomoviruses, the A component encodes five or six proteins. On the v-sense: the CP. On the c-sense: Rep, a transcriptional activator (TrAP/AL2), a replication enhancer (REn), AC4, and, in some strains an optional protein AV2. The B component encodes two proteins involved in movement. BC1 on the c-sense and BV1 on the v-sense.

Monopartite begomoviruses encode six proteins: Rep, TrAP, CP, REn, C4, and V2.

ENZYMES

REPLICATION

NUCLEAR

  1. Virus penetrates into the host cell.
  2. Uncoating, the viral ssDNA genome penetrates into the nucleus.
  3. The ssDNA is converted into dsDNA with the participation of cellular factors.
  4. bidirectional dsDNA transcription from the IR promoter produces viral mRNAs and translation of viral proteins.
  5. Replication is initiated by cleavage of the(+)strand by REP, and occurs by rolling circle producing ssDNA genomes.
  6. These newly synthesized ssDNA can either
    a) be converted to dsDNA and serve as a template for transcription/replication
    b) be encapsidated by CP and form virions released from the cell by budding
    c) be transported outside the nucleus, to a neighboring cell through plasmodesmata (cell-cell movement) with the help of viral movement proteins.

Host-virus interaction

Cell-cycle modulation

Begomovirus protein Rep is responsible for inhibiting host retinoblastoma protein and inducing transition from the G1 to S phase in preparation for virus replication since the virus targets differentiated non-dividing cells. .

Suppression of host silencing-mediated antiviral defense

Begomovirus viral proteins are able to suppress host cell RNA silencing

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

130 entries grouped by strain

9 entries

Indian cassava mosaic virus (ICMV) reference strain

Select_allDeselect_all
REP_ICMV Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein AC1) (Protein AL1)
CAPSD_ICMV Capsid protein (Coat protein) (CP)
TRAP_ICMV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
NSP_ICMV Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
AC4_ICMV Protein AC4 (Protein AL4)
REN_ICMV Replication enhancer protein (REn) (Protein AC3) (Protein AL3)
AV2_ICMV Protein AV2
MVP_ICMV Movement protein BC1 (Movement protein BL1)
YAL4_ICMV Putative uncharacterized protein AC5

8 entries

African cassava mosaic virus (isolate Nigerian) (ACMV) (Cassava latent virus (isolate Nigerian)) reference strain

Select_allDeselect_all
REP_CLVN Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (40.4 kDa protein) (Protein AC1) ...
CAPSD_CLVN Capsid protein (Coat protein) (CP)
TRAP_CLVN Transcriptional activator protein (TrAP) (15.2 kDa protein) (Protein AC2) (Protein AL2)
NSP_CLVN Nuclear shuttle protein (NSP) (29.4 kDa protein) (Protein BR1) (Protein BV1)
AC4_CLVN Protein AC4 (Protein AL4)
AV2_CLVN Uncharacterized 13.1 kDa protein
REN_CLVN Replication enhancer protein (REn) (15.9 kDa protein) (Protein AC3) (Protein AL3)
MVP_CLVN Movement protein BC1 (33.7 kDa protein) (Movement protein BL1)

8 entries

Mungbean yellow mosaic virus (strain Vigna) (MYMV) reference strain

Select_allDeselect_all
REP_MYMVV Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein AC1) (Protein AL1)
TRAP_MYMVV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
CAPSD_MYMVV Capsid protein (Coat protein) (CP)
NSP_MYMVV Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
AC4_MYMVV Protein AC4 (Protein AL4)
REN_MYMVV Replication enhancer protein (REn) (Protein AC3) (Protein AL3)
AV2_MYMVV Protein AV2
MVP_MYMVV Movement protein BC1 (Movement protein BL1)

7 entries

Abutilon mosaic virus (isolate West India) (AbMV) reference strain

Select_allDeselect_all
REP_ABMVW Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein AC1) (Protein AL1)
CAPSD_ABMVW Capsid protein (Coat protein) (CP)
TRAP_ABMVW Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
NSP_ABMVW Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
MVP_ABMVW Movement protein BC1 (Movement protein BL1)
AC4_ABMVW Protein AC4 (Protein AL4)
REN_ABMVW Replication enhancer protein (REn) (Protein AC3) (Protein AL3)

7 entries

Bean golden yellow mosaic virus (isolate Puerto Rico) (BGYMV) (Bean golden mosaic virus (isolate Puerto Rico)) reference strain

Select_allDeselect_all
REP_BGYMV Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (40.2 kDa protein) (Protein AC1) ...
CAPSD_BGYMV Capsid protein (Coat protein) (CP)
TRAP_BGYMV Transcriptional activator protein (TrAP) (19.6 kDa protein) (Protein AC2) (Protein AL2)
NSP_BGYMV Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
AC4_BGYMV Protein AC4 (Protein AL4)
REN_BGYMV Replication enhancer protein (REn) (15.6 kDa protein) (Protein AC3) (Protein AL3)
MVP_BGYMV Movement protein BC1 (Movement protein BL1)

7 entries

Bean golden yellow mosaic virus (isolate Puerto Rico-Japan) (BGYMV) reference strain

Select_allDeselect_all
REP_BGYMJ Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (40.2 kDa protein) (Protein AC1) ...
CAPSD_BGYMJ Capsid protein (Coat protein) (CP)
TRAP_BGYMJ Transcriptional activator protein (TrAP) (19.6 kDa protein) (Protein AC2) (Protein AL2)
NSP_BGYMJ Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
REN_BGYMJ Replication enhancer protein (REn) (15.6 kDa protein) (Protein AC3) (Protein AL3)
MVP_BGYMJ Movement protein BC1 (Movement protein BL1)
AC4_BGYMJ Protein AC4 (Protein AL4)

7 entries

Squash leaf curl virus (SLCV) reference strain

Select_allDeselect_all
NSP_SLCV Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
MVP_SLCV Movement protein BC1 (Movement protein BL1)
REP_SLCV Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein AC1) (Protein AL1)
CAPSD_SLCV Capsid protein (Coat protein) (CP)
TRAP_SLCV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
AC4_SLCV Protein AC4 (Protein AL4)
REN_SLCV Replication enhancer protein (REn) (Protein AC3) (Protein AL3)

7 entries

Tomato golden mosaic virus (strain Yellow vein) (TGMV) reference strain

Select_allDeselect_all
TRAP_TGMVY Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
REP_TGMVY Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein AC1) (Protein AL1)
AC4_TGMVY Protein AC4 (Protein AL4)
CAPSD_TGMVY Capsid protein (Coat protein) (CP)
REN_TGMVY Replication enhancer protein (REn) (Protein AC3) (Protein AL3)
NSP_TGMVY Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
BC1_TGMVY Movement protein BC1 (Movement protein BL1)

6 entries

Pepper huasteco yellow vein virus (PHYVV) (Pepper huasteco virus) reference strain

Select_allDeselect_all
REP_PHUV Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein AC1) (Protein AL1)
CAPSD_PHUV Capsid protein (Coat protein) (CP)
TRAP_PHUV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
NSP_PHUV Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
AC4_PHUV Protein AC4 (Protein AL4)
REN_PHUV Replication enhancer protein (REn) (Protein AC3) (Protein AL3)

5 entries

Tomato leaf curl virus (strain Australia) (ToLCV) reference strain

Select_allDeselect_all
TRAP_TLCVA Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
CAPSD_TLCVA Capsid protein (Coat protein) (CP)
REN_TLCVA Replication enhancer protein (REn) (Protein C3) (Protein L3)
AV2_TLCVA Protein V2
AC4_TLCVA Protein C4 (10.9 kDa protein) (Protein L4)

6 entries

Tomato mottle virus (isolate Florida) (ToMoV) reference strain

Select_allDeselect_all
REP_TMOV Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein AC1) (Protein AL1)
TRAP_TMOV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
CAPSD_TMOV Capsid protein (Coat protein) (CP)
NSP_TMOV Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
REN_TMOV Replication enhancer protein (REn) (Protein AC3) (Protein AL3)
BC1_TMOV Movement protein BC1 (Movement protein BL1)

6 entries

Tomato yellow leaf curl Sardinia virus (TYLCSV) reference strain

Select_allDeselect_all
REP_TYCSV Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein C1)
TRAP_TYCSV Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
CAPSD_TYCSV Capsid protein (Coat protein) (CP)
REN_TYCSV Replication enhancer protein (REn) (Protein C3) (Protein L3)
AC4_TYCSV Protein C4 (11.1 kDa protein) (Protein L4)
AV2_TYCSV Protein V2

6 entries

Tomato yellow leaf curl virus (strain Israel) (TYLCV) reference strain

Select_allDeselect_all
REP_TYLCI Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein C1)
TRAP_TYLCI Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
CAPSD_TYLCI Capsid protein (Coat protein) (CP)
REN_TYLCI Replication enhancer protein (REn) (15.6 kDa protein) (Protein C3) (Protein L3)
AV2_TYLCI Protein V2
AC4_TYLCI Protein C4 (10.9 kDa protein) (Protein L4)

8 entries

African cassava mosaic virus (isolate West Kenyan 844) (ACMV) (Cassava latent virus (isolate West Kenyan 844))

Select_allDeselect_all
REP_CLVK Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (40.4 kDa protein) (Protein AC1) ...
CAPSD_CLVK Capsid protein (Coat protein) (CP)
NSP_CLVK Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
TRAP_CLVK Transcriptional activator protein (TrAP) (15.2 kDa protein) (Protein AC2) (Protein AL2)
AC4_CLVK Protein AC4 (Protein AL4)
AV2_CLVK Protein AV2
REN_CLVK Replication enhancer protein (REn) (15.9 kDa protein) (Protein AC3) (Protein AL3)
MVP_CLVK Movement protein BC1 (33.7 kDa protein) (Movement protein BL1)

7 entries

Cabbage leaf curl virus (isolate Jamaica) (CaLCuV)

Select_allDeselect_all
TRAP_CALCV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
REP_CALCV Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (40.2 kDa protein) (Protein AC1) ...
NSP_CALCV Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
CAPSD_CALCV Capsid protein (Coat protein) (CP)
REN_CALCV Replication enhancer protein (REn) (15.6 kDa protein) (Protein AC3) (Protein AL3)
AC4_CALCV Protein AC4 (Protein AL4)
MVP_CALCV Movement protein BC1 (Movement protein BL1)

7 entries

Potato yellow mosaic virus (isolate Venezuela) (PYMV)

Select_allDeselect_all
REP_PYMVV Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein AC1) (Protein AL1)
CAPSD_PYMVV Capsid protein (Coat protein) (CP)
TRAP_PYMVV Transcriptional activator protein (TrAP) (Protein AC2) (Protein AL2)
NSP_PYMVV Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1)
AC4_PYMVV Protein AC4 (Protein AL4)
REN_PYMVV Replication enhancer protein (REn) (Protein AC3) (Protein AL3)
MVP_PYMVV Movement protein BC1 (Movement protein BL1)

1 entry

Tomato leaf curl virus (strain Australia) (ToLCV)

REP_TLCVA Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein C1)

6 entries

Tomato yellow leaf curl China virus (TYLCCNV)

Select_allDeselect_all
TRAP_TYLCC Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
REP_TYLCC Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein C1)
REN_TYLCC Replication enhancer protein (REn) (Protein C3) (Protein L3)
CAPSD_TYLCC Capsid protein (Coat protein) (CP)
AV2_TYLCC Protein V2
AC4_TYLCC Protein C4 (10.9 kDa protein) (Protein L4)

6 entries

Tomato yellow leaf curl Sardinia virus (isolate Spain-1) (TYLCSV)

Select_allDeselect_all
REP_TYCS1 Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein C1)
TRAP_TYCS1 Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
CAPSD_TYCS1 Capsid protein (Coat protein) (CP)
REN_TYCS1 Replication enhancer protein (REn) (Protein C3) (Protein L3)
AC4_TYCS1 Protein C4 (10.9 kDa protein) (Protein L4)
AV2_TYCS1 Protein V2

6 entries

Tomato yellow leaf curl Sardinia virus (isolate Spain-2) (TYLCSV)

Select_allDeselect_all
REP_TYCS2 Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein C1)
TRAP_TYCS2 Transcriptional activator protein (TrAP) (Protein C2) (Protein L2)
AV2_TYCS2 Protein V2
CAPSD_TYCS2 Capsid protein (Coat protein) (CP)
REN_TYCS2 Replication enhancer protein (REn) (Protein C3) (Protein L3)
AC4_TYCS2 Protein C4 (10.9 kDa protein) (Protein L4)
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Abutilon mosaic virus (isolate West India) taxid:10816

Protein ModelArchive
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27369
Nuclear shuttle protein (NSP) (Protein BR1) (Protein BV1) ma-jd-viral-27665
Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein AC1) (Protein... ma-jd-viral-20479

Ageratum yellow vein China virus - [Hn2] taxid:222078

Protein ModelArchive
Capsid protein (Coat protein) ma-jd-viral-28140
Protein V2 ma-jd-viral-05727
Replication enhancer (REn) ma-jd-viral-03596
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20462
Transcriptional activator protein (TrAP) ma-jd-viral-54087
Transcriptional regulator protein ma-jd-viral-45186

Ageratum yellow vein virus taxid:44560

Protein ModelArchive
C4 protein ma-jd-viral-45246
Capsid protein (Coat protein) ma-jd-viral-28258
Protein V2 ma-jd-viral-05697
Replication enhancer (REn) ma-jd-viral-03734
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20303
Transcriptional activator protein (TrAP) ma-jd-viral-53943

Begomovirus agerati taxid:188333

Protein ModelArchive
C4 protein ma-jd-viral-45369
Capsid protein (Coat protein) ma-jd-viral-28378
Protein V2 ma-jd-viral-05648
Replication enhancer (REn) ma-jd-viral-03444
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20346
Transcriptional activator protein (TrAP) ma-jd-viral-54193

Cotton leaf crumple virus - [Mexico : Sonora] taxid:335400

Protein ModelArchive
Capsid protein (Coat protein) ma-jd-viral-28059
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27384
Nuclear shuttle protein (NSP) ma-jd-viral-27585
Replication enhancer (REn) ma-jd-viral-03647
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20367
Transcriptional activator protein (TrAP) ma-jd-viral-54090

Cotton yellow mosaic virus taxid:79236

Protein ModelArchive
AC4 ma-jd-viral-45450
Capsid protein (Coat protein) ma-jd-viral-28228
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27319
Nuclear shuttle protein (Protein BR1) (Protein BV1) ma-jd-viral-27691
Protein V2 ma-jd-viral-05672
Replication enhancer (REn) ma-jd-viral-03672
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20606
Transcriptional activator protein (TrAP) ma-jd-viral-54205

Croton yellow vein mosaic virus taxid:207697

Protein ModelArchive
AC4 ma-jd-viral-45425
AC5 protein (AC5b) ma-jd-viral-41276
Capsid protein (Coat protein) ma-jd-viral-28306
Protein V2 ma-jd-viral-05649
Replication enhancer (REn) ma-jd-viral-03553
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20393
Transcriptional activator protein (TrAP) ma-jd-viral-54102

East African cassava mosaic Malawi virus taxid:223264

Protein ModelArchive
Capsid protein (Coat protein) ma-jd-viral-28100
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27349
Nuclear shuttle protein (Protein BR1) (Protein BV1) ma-jd-viral-27668
Protein V2 ma-jd-viral-05819
Replication enhancer (REn) ma-jd-viral-03729
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20504
Transcriptional activator protein (TrAP) ma-jd-viral-53948

East African cassava mosaic Zanzibar virus taxid:223275

Protein ModelArchive
AC4 protein ma-jd-viral-45401
Capsid protein (Coat protein) ma-jd-viral-28363
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27330
Nuclear shuttle protein (Protein BR1) (Protein BV1) ma-jd-viral-27628
Protein V2 ma-jd-viral-05821
Replication enhancer (REn) ma-jd-viral-03662
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20265
Transcriptional activator protein (TrAP) ma-jd-viral-53912

Euphorbia mosaic virus - A [Mexico:Yucatan:2004] taxid:429564

Protein ModelArchive
Capsid protein (Coat protein) ma-jd-viral-28129
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27406
Nuclear shuttle protein (NSP) ma-jd-viral-27683
Replication enhancer (REn) ma-jd-viral-03765
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20492
Transcriptional activator protein (TrAP) ma-jd-viral-53998

Hollyhock leaf crumple virus-[Cairo] taxid:223279

Protein ModelArchive
C4 ma-jd-viral-45238
Capsid protein (Coat protein) ma-jd-viral-28069
Protein V2 ma-jd-viral-05787
Replication enhancer (REn) ma-jd-viral-03719
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20586
Transcriptional activator protein (TrAP) ma-jd-viral-54168

Jatropha mosaic virus taxid:75574

Protein ModelArchive
AC4 ma-jd-viral-45195
Capsid protein (Coat protein) ma-jd-viral-28251
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27314
Nuclear shuttle protein (NSP) ma-jd-viral-27632
Replication enhancer (REn) ma-jd-viral-03745
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20548
Transcriptional activator protein (TrAP) ma-jd-viral-54028

Luffa yellow mosaic virus taxid:207240

Protein ModelArchive
Capsid protein (Coat protein) ma-jd-viral-28388
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27372
Nuclear shuttle protein (Protein BR1) (Protein BV1) ma-jd-viral-27605
Protein V2 ma-jd-viral-05797
Replication enhancer (REn) ma-jd-viral-03700
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20216
Transcriptional activator protein (TrAP) ma-jd-viral-54006
Uncharacterized protein AC4 ma-jd-viral-65192

Macroptilium golden mosaic virus-[Jamaica:Wissadula:August Town] taxid:475627

Protein ModelArchive
Capsid protein (Coat protein) ma-jd-viral-28354
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27378
Nuclear shuttle protein (NSP) ma-jd-viral-27644
Replication enhancer (REn) ma-jd-viral-03690
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20576
Transcriptional activator protein (TrAP) ma-jd-viral-54236

Macroptilium yellow mosaic virus taxid:169865

Protein ModelArchive
AC4 protein ma-jd-viral-57708
Capsid protein (Coat protein) ma-jd-viral-28180
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27401
Nuclear shuttle protein (NSP) ma-jd-viral-27610
Replication enhancer (REn) ma-jd-viral-03451
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20219
Transcriptional activator protein (TrAP) ma-jd-viral-54180

Melon chlorotic leaf curl virus taxid:165826

Protein ModelArchive
Capsid protein (Coat protein) ma-jd-viral-28421
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27427
Nuclear shuttle protein (NSP) ma-jd-viral-27629
Replication enhancer (REn) ma-jd-viral-03714
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20649
Transcriptional activator protein (TrAP) ma-jd-viral-53979

Melon chlorotic mosaic virus taxid:180399

Protein ModelArchive
AC4 ma-jd-viral-65229
Capsid protein (Coat protein) ma-jd-viral-28136
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27389
Nuclear shuttle protein (NSP) ma-jd-viral-27612
Replication enhancer (REn) ma-jd-viral-03668
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20529
Transcriptional activator protein (TrAP) ma-jd-viral-53974

Merremia mosaic virus taxid:77813

Protein ModelArchive
AC4 ma-jd-viral-45226
Capsid protein (Coat protein) ma-jd-viral-28305
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27371
Nuclear shuttle protein (NSP) ma-jd-viral-27619
Replication enhancer (REn) ma-jd-viral-03463
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20289
Transcriptional activator protein (TrAP) ma-jd-viral-54166

Papaya leaf curl China virus taxid:229634

Protein ModelArchive
Capsid protein (Coat protein) ma-jd-viral-28068
Protein V2 ma-jd-viral-05699
Transcriptional activator protein (TrAP) ma-jd-viral-53913

Papaya leaf curl China virus - [G8] taxid:269109

Protein ModelArchive
AC4 protein ma-jd-viral-45247
Capsid protein (Coat protein) ma-jd-viral-28068
Protein V2 ma-jd-viral-05699
Replication enhancer (REn) ma-jd-viral-03644
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20597
Transcriptional activator protein (TrAP) ma-jd-viral-53913

Rhynchosia golden mosaic virus taxid:117198

Protein ModelArchive
AC4 ma-jd-viral-45358
Capsid protein (Coat protein) ma-jd-viral-28102
Replication enhancer (REn) ma-jd-viral-03475
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20363
Transcriptional activator protein (TrAP) ma-jd-viral-54025

Sida golden mosaic Florida virus-Malvastrum taxid:871521

Protein ModelArchive
AC4 protein ma-jd-viral-45329
Capsid protein (Coat protein) ma-jd-viral-28352
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27317
Nuclear shuttle protein (NSP) ma-jd-viral-27600
Replication enhancer (REn) ma-jd-viral-03717
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20565
Transcriptional activator protein (TrAP) ma-jd-viral-54198

Sri Lankan cassava mosaic virus-[Colombo] taxid:223328

Protein ModelArchive
AC4 protein ma-jd-viral-45343
Capsid protein (Coat protein) ma-jd-viral-28304
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27398
Nuclear shuttle protein (Protein BR1) (Protein BV1) ma-jd-viral-27649
Protein V2 ma-jd-viral-05640
Replication enhancer (REn) ma-jd-viral-03525
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20238
Transcriptional activator protein (TrAP) ma-jd-viral-54248

Stachytarpheta leaf curl virus - [Hn5] taxid:223329

Protein ModelArchive
Capsid protein (Coat protein) ma-jd-viral-28095
Protein V2 ma-jd-viral-05830
Replication enhancer (REn) ma-jd-viral-03530
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20502
Transcriptional activator protein (TrAP) ma-jd-viral-54158
Transcriptional regulator protein ma-jd-viral-45362

Tobacco curly shoot virus taxid:180526

Protein ModelArchive
Protein V2 ma-jd-viral-05665

Tobacco curly shoot virus - [Y41] taxid:223250

Protein ModelArchive
AC4 protein ma-jd-viral-45306
Capsid protein (Coat protein) ma-jd-viral-28367
Protein V2 ma-jd-viral-05665
Replication enhancer (REn) ma-jd-viral-03653
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20217
Transcriptional activator protein (TrAP) ma-jd-viral-53987

Tomato golden mottle virus taxid:223342

Protein ModelArchive
AC4 ma-jd-viral-45198
Capsid protein (Coat protein) ma-jd-viral-28235
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27337
Nuclear shuttle protein (NSP) ma-jd-viral-27630
Replication enhancer (REn) ma-jd-viral-03603
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20609
Transcriptional activator protein (TrAP) ma-jd-viral-54116

Tomato leaf curl China virus taxid:229636

Protein ModelArchive
AC4 protein ma-jd-viral-45196
Capsid protein (Coat protein) ma-jd-viral-28103
Protein V2 ma-jd-viral-05609
Replication enhancer (REn) ma-jd-viral-03658
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20405
Transcriptional activator protein (TrAP) ma-jd-viral-54225

Tomato leaf curl China virus - [G32] taxid:269303

Protein ModelArchive
AC4 protein ma-jd-viral-45196
Capsid protein (Coat protein) ma-jd-viral-28103
Protein V2 ma-jd-viral-05609
Replication enhancer (REn) ma-jd-viral-03658
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20405
Transcriptional activator protein (TrAP) ma-jd-viral-54225

Tomato leaf curl New Delhi virus taxid:223347

Protein ModelArchive
C4 protein ma-jd-viral-51089
Capsid protein (Coat protein) ma-jd-viral-28345
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27383
Nuclear shuttle protein (Protein BR1) (Protein BV1) ma-jd-viral-27583
Replication enhancer (REn) ma-jd-viral-03663
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20233
Transcriptional activator protein (TrAP) ma-jd-viral-53900

Tomato leaf curl New Delhi virus-Severe taxid:223351

Protein ModelArchive
AC4 ma-jd-viral-51089
AC5 ma-jd-viral-65190
AV3 ma-jd-viral-39773
Capsid protein (Coat protein) ma-jd-viral-28345
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27383
Nuclear shuttle protein (Protein BR1) (Protein BV1) ma-jd-viral-27583
Protein V2 ma-jd-viral-05810
Replication enhancer (REn) ma-jd-viral-03663
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20233
Transcriptional activator protein (TrAP) ma-jd-viral-53900

Tomato leaf curl Sinaloa virus taxid:71186

Protein ModelArchive
AC4 protein ma-jd-viral-45407
Capsid protein (Coat protein) ma-jd-viral-28131
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27310
Nuclear shuttle protein (NSP) ma-jd-viral-27640
Replication enhancer (REn) ma-jd-viral-03699
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20417
Transcriptional activator protein (TrAP) ma-jd-viral-54217

Tomato leaf curl Sri Lanka virus taxid:223352

Protein ModelArchive
C4 protein ma-jd-viral-45266
Capsid protein (Coat protein) ma-jd-viral-28038
Protein V2 ma-jd-viral-05721
Replication enhancer (REn) ma-jd-viral-03731
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20334
Transcriptional activator protein (TrAP) ma-jd-viral-54099

Tomato mottle leaf curl virus taxid:172394

Protein ModelArchive
AC4 protein ma-jd-viral-45370
Capsid protein (Coat protein) ma-jd-viral-28187
Replication enhancer (REn) ma-jd-viral-03782
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20283
Transcriptional activator protein (TrAP) ma-jd-viral-54238

Tomato severe rugose virus taxid:158463

Protein ModelArchive
AC4 protein ma-jd-viral-45365
Capsid protein (Coat protein) ma-jd-viral-28415
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27424
Nuclear shuttle protein (NSP) ma-jd-viral-27572
Replication enhancer (REn) ma-jd-viral-03736
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20167
Transcriptional activator protein (TrAP) ma-jd-viral-53966

Tomato yellow leaf curl China virus taxid:185793

Protein ModelArchive
AC4 protein ma-jd-viral-45263
Capsid protein (Coat protein) (CP) ma-jd-viral-28329
Protein C4 (10.9 kDa protein) (Protein L4) ma-jd-viral-45263
Protein V2 ma-jd-viral-05681
Replication enhancer protein (REn) (Protein C3) (Protein L3) ma-jd-viral-03671
Replication-associated protein (Rep) (EC 2.7.7.-) (EC 3.1.21.-) (Protein C1) ma-jd-viral-20643
Transcriptional activator protein (TrAP) (Protein C2) (Protein L2) ma-jd-viral-53896

Tomato yellow leaf curl virus taxid:10832

Protein ModelArchive
AC4 (C4) ma-jd-viral-45383
Protein V2 ma-jd-viral-05813
Replication enhancer (REn) ma-jd-viral-03439
Transcriptional activator protein (TrAP) ma-jd-viral-54051

Tomato yellow leaf curl virus (strain Israel) taxid:66366

Protein ModelArchive
Protein V2 ma-jd-viral-05813

Tomato yellow leaf curl virus-[Almeria] taxid:220938

Protein ModelArchive
C4 protein ma-jd-viral-45383
Capsid protein (Coat protein) ma-jd-viral-28328
Protein V2 ma-jd-viral-05813
Replication enhancer (REn) ma-jd-viral-03439
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20536
Transcriptional activator protein (TrAP) ma-jd-viral-54051

Tomato yellow mottle virus taxid:86502

Protein ModelArchive
AC4 protein ma-jd-viral-45314
Capsid protein (Coat protein) ma-jd-viral-28316
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27315
Nuclear shuttle protein (NSP) ma-jd-viral-27661
Replication enhancer (REn) ma-jd-viral-03467
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20569
Transcriptional activator protein (TrAP) ma-jd-viral-53920

Tomato yellow vein streak virus taxid:55216

Protein ModelArchive
AC4 ma-jd-viral-45308
Capsid protein (Coat protein) ma-jd-viral-28104
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27393
Nuclear shuttle protein (NSP) ma-jd-viral-27570
Replication enhancer (REn) ma-jd-viral-03500
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20206
Transcriptional activator protein (TrAP) ma-jd-viral-54127

Watermelon chlorotic stunt virus taxid:35341

Protein ModelArchive
Capsid protein (Coat protein) ma-jd-viral-28117
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27326
Nuclear shuttle protein (Protein BR1) (Protein BV1) ma-jd-viral-27670
Protein V2 ma-jd-viral-05747
Replication enhancer (REn) ma-jd-viral-03787
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20560
Transcriptional activator protein (TrAP) ma-jd-viral-54024

Wissadula golden mosaic St Thomas Virus taxid:373593

Protein ModelArchive
AC4 ma-jd-viral-45452
Capsid protein (Coat protein) ma-jd-viral-28384
Movement protein BC1 (Movement protein BL1) ma-jd-viral-27346
Nuclear shuttle protein (NSP) ma-jd-viral-27660
Replication enhancer (REn) ma-jd-viral-03495
Replication-associated protein (Rep) (EC 3.1.21.-) ma-jd-viral-20184
Transcriptional activator protein (TrAP) ma-jd-viral-54058