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Virology links Core content: ... UniProt protein sequences of all ...
... comparative host HIV-1 protein interaction network ...
... sequences, protein sequences structures ...
... genomes and protein sequence structures ...
... PIRSpred For HIV-1 protein-inhibitor resistance ...
... classifying viral protein modules web all ...
... Organizes homologous protein families from animal ...
... of data (sequences, protein structures, epitopes, ...
... INTRINSIC STRUCTURE OF VIRUS CAPSIDS ...
... Details on capsid structure and nomenclature ...
... determination of the structure and biological ...
... virus sequences and analysis tools web Dengue http ...
... database Sequence analysis tools and data for RNA ...
... ATIVS ATIVS Analysis tools for influenza ...
... of flaviviruses and analysis tools web Flaviviruses ...
... for comparative analysis of viral genomes ...
... a phylogenetic analysis tool web HAV, HBV, ...
... sequences and several analysis tools web Hemorrhagic ...
... Metavir Web server for analysis of viral metagenomes ...
... sequence retrieval and analysis tools web Influenza ...
... sequence retrieval and analysis tools web Ebolavirus, ...
... LAM-PCR and nrLAM-PCR analysis web Integrated virus ...
... amino acid sequence analysis platform download all ...
... Database For research analysis of viroids, satellite ...
... metadata) and analysis tools (BLAST, ...
... information, read-pair analysis and targeted de novo ...
... viRome R package for analysis of viral small RNA ...
... Perl script for analysis of viral siRNA ...
... annotation and analysis tools web ...
DNA-dependent DNA polymerase Core content: ... by 5Fprotein 10537 Protein-primed initiation of ...
... by 5Fprotein 10178 Protein-primed initiation of ...
... www.ncbi.nlm.nih.gov protein SUBMIT y term 2.7.7.7 ...
... by 5Fprotein 10537 Protein-priming dsDNA viruses ...
... 3A10239 29 UniProt Structure https www.rcsb.org ...
... insights from global analysis of viral genomes ...
... insights from global analysis of viral genomes ...
Structure predictions Core content: ... ESMfold Web resource Protein language model Max ...
... shows the name of the protein, and a link to the ...
... of predicted viral protein structures Rachel ...
... hidden Birth of protein folds and functions in ...
... database of virus protein structure predictions ...
... hidden Multiple Protein Structure Alignment at ...
... ColabFold making protein folding accessible to ...
... Fast and accurate protein structure search with ...
... of atomic-level protein structure with a ...
... initial-scale 1.0 Structure predictions ViralZone ...
... wiki t0 Virus structure predictions Predicting ...
... Predicting the structure of viral proteins ...
... aligned. New tools for structure prediction and ...
... proteome of viruses. Structure prediction model Name ...
... Pubmed.gif More on structure prediction software ...
... additional-resources structure-prediction PDB Tools ...
... search Foldseek Structure alignment search ...
... Virus model database Structure database Dataset ...
... by virus. For each structure, a link to the ...
... provides access to the structure data. The pop-up ...
... you to preview the structure (ModelArchive) or the ...
... entry displaying a PDB structure, if available. float ...
... of virus protein structure predictions Ulad ...
... Multiple Protein Structure Alignment at Scale ...
... and accurate protein structure search with Foldseek ...
... hidden Accurate structure prediction of ...
... atomic-level protein structure with a language model ...
... prediction and analysis are shedding light on ...
HIV Virion Core content: ... research avp protein 5Fdb.asp Database of ...
... virus type 1 capsid protein at serine 16, required ...
... virus type 1 Vpr protein is incorporated into ...
... stoichiometry of Gag protein in HIV-1 John A. G. ...
... recognition particle protein, is an abundant ...
... hidden Towards the structure of the human ...
... Three-dimensional analysis of budding sites and ...
... Electron tomography analysis of envelope ...
... and biochemical analysis of purified human ...
Replicative transposition Core content: ... target DNA activator protein B (MuB) brings the ...
... The transpososome structure sheds light on DDE ...
... evolutionary genomic analysis of the Pseudomonas ...
HIV_cycle Core content: ... , Mx2 antiviral protein expression PMID ...
... eukaryotes. The viral protein rev specifically ...
... virus type 1 capsid protein at serine 16, required ...
... virus type 1 Vpr protein is incorporated into ...
... stoichiometry of Gag protein in HIV-1 John A. G. ...
... hidden Towards the structure of the human ...
... Three-dimensional analysis of budding sites and ...
... Electron tomography analysis of envelope ...
News archive Core content: ... Interactome,links and protein annotation has been ...
... been updated. Spike protein analysis has allowed ...
... and virus exit. Protein data popups (example ...
... for a quick protein overview from ...
... , Proteins by strain , Protein by name . Additional ...
... non-structural protein Mourad Belhouchet, ...
... image The structure of by 5Fspecies 207 ...
... has a unique virion structure PMID 24591590 http ...
... that covers both virus structure and viral molecular ...
... updated. Spike protein analysis has allowed predicting ...
HIV Table 2 Core content: ... black 10 white Host Protein black 1 white black 9 ...
... black 9 white Virus Protein black 28 white ...
... Modulates HIV matrix protein conformation. PMID ...
... Vpu SCF E3 ubiquitin- protein ligase complex. PMID ...
... black 17 white Host Protein black 1 white black 18 ...
... black 18 white Virus Protein black 40 white ...
... of the 110K viral protein and the T4 molecule J. ...
... integrase binding protein LEDGF p75 and HIV-1 ...
... with transportin 3 protein (TNPO3 or TRN-SR2) ...
... with the HIV-1 Tat protein to facilitate viral ...
... The histone chaperone protein Nucleosome Assembly ...
... Nucleosome Assembly Protein-1 (hNAP-1) binds HIV-1 ...
... p300 and CREB-binding protein histone ...
... hidden A DEAD box protein facilitates HIV-1 ...
... and the vacuolar protein sorting pathway are ...
... from the HIV-1 matrix protein p17 Yoshinobu Izumi, ...
... hidden The host protein Staufen1 interacts ...
... (HP68), a cellular protein important for HIV-1 ...
... hidden HIV-1 Vpu protein antagonizes innate ...
... A novel human WD protein, h-beta TrCp, that ...
... the clathrin adaptor protein complex 1 Xiaofei Jia, ...
... domains of HIV-1 viral protein U and human CD4 with ...
... virus type 1 Nef protein to CD4 cytoplasmic ...
... of HIV-1 Nef protein with the host protein ...
... protein with the host protein Alix promotes ...
... 25170080 hidden HIV-1 Protein Nef Inhibits Activity ...
... virus type 1 Nef protein binds the Src-related ...
... by the Nef protein of HIV-1 S. D. Briggs, ...
... hidden HIV-1 Vif protein binds the editing ...
... mediated by the SAMHD1 protein Kasia Hrecka, Caili ...
... hidden HIV-1 Tat protein-mediated ...
... Tat-interacting protein of 110 kDa, Tip110 ...
... virus type 1 Tat protein and Sp1 transcription ...
... of the DEAD-box protein DDX24 for the ...
... HHR23A, a cellular protein implicated in ...
... 8980234 hidden Crystal structure of human cyclophilin A ...
... reveals a novel structure of calmodulin ...
... down-regulation analysis using short ...
... hidden Structural analysis of viral infectivity ...
Degradation of host cell envelope components during virus entry Core content: ... the receptor-binding protein of bacteriophage det7 ...
... Sf6 tailspike protein (TSP) endorhamnosidase ...
... 64 entries grouped by protein t6 Proteins by Strain ...
... (Probable tail spike protein) _form post Select_all ...
... submit protein_list protein q D1L302 checkbox ...
... (Probable tail spike protein) xrefs PDB links note ...
... 8BKE 8BKE protein_list protein q K9L8K6 checkbox ...
... (KP36gp50) (Tail spike protein) protein_list protein ...
... protein) protein_list protein q A0A3T0ZBZ8 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q A0A7S6R613 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q A0A7S6R611 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q A0A068Q5Q5 checkbox ...
... 34) (gp34) (K1-ORF34 protein) (Probable tail spike ...
... (Probable tail spike protein) xrefs PDB links note ...
... 7W1E 7W1E protein_list protein q S6C8R9 checkbox ...
... Probable tail spike protein (Depolymerase, capsule ...
... protein_list protein q A0A5P1KKQ4 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q A0A142F121 checkbox ...
... KpV71) protein_list protein q A0A1P8VW90 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q P0DTN7 checkbox ...
... (B1dep) (Tail spike protein) protein_list protein ...
... protein) protein_list protein q A0A3S5IBH4 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q P0DTN8 checkbox ...
... 2) (gp2) (Tail spike protein) xrefs PDB links note ...
... (Probable tail fiber protein) _form post ...
... submit protein_list protein q A0A0A8JBQ8 checkbox ...
... (Probable tail spike protein) _form post ...
... submit protein_list protein q A0A0A8JA02 checkbox ...
... (Probable tail spike protein) _form post ...
... submit protein_list protein q A0A0A8J8S8 checkbox ...
... (Probable tail fiber protein) _form post ...
... submit protein_list protein q A0A0A8J9A5 checkbox ...
... (Probable tail fiber protein) _form post ...
... submit protein_list protein q A0A0A8J9V7 checkbox ...
... Probable tail spike protein (Depolymerase, capsule ...
... submit protein_list protein q A0A0A8JA06 checkbox ...
... (Probable tail fiber protein) _form post ...
... submit protein_list protein q A0A0A8J8T2 checkbox ...
... (Probable tail fiber protein) _form post ...
... submit protein_list protein q A0A0A8JBR2 checkbox ...
... (Probable tail spike protein) _form post ...
... submit protein_list protein q A0A0A8J9B0 checkbox ...
... (Probable tail spike protein) _form post Select_all ...
... submit protein_list protein q A0A3T0ZBY1 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q D1L2X0 checkbox ...
... strain protein_list protein q A0A219YHC0 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q A0A0U3DL17 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q A0A219YHG0 checkbox ...
... (Probable tail spike protein) upcount 5 entries ...
... (Probable tail spike protein) _form post Select_all ...
... submit protein_list protein q A0A3T0ZBX8 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q D1L2X1 checkbox ...
... (Probable tail spike protein) xrefs PDB links note ...
... 6TKU 6TKU protein_list protein q A0A219YHC2 checkbox ...
... strain protein_list protein q A0A0U3C9T3 checkbox ...
... (Probable tail spike protein) protein_list protein ...
... protein) protein_list protein q A0A219YHF3 checkbox ...
... submit protein_list protein q Q9T1S1 checkbox ...
... (Internal virion protein gp27) protein_list ...
... gp27) protein_list protein q Q8SCY1 checkbox ...
... (Gp181) protein_list protein q Q7Y2C9 checkbox ...
... (Gp36) protein_list protein q P26746 checkbox ...
... (Gp4) (Internal virion protein gp4) (Tail adapter ...
... gp4) (Tail adapter protein gp4) xrefs PDB links ...
... 8U11 8U11 protein_list protein q P07582 checkbox ...
... 5) (Gp5) protein_list protein q Q9XJR8 checkbox ...
... hydrolase P7 ( Protein VII) protein_list ...
... VII) protein_list protein q P27380 checkbox ...
... (EC 4.2.2.n1) ( Protein P7) protein_list ...
... P7) protein_list protein q Q7Y5N4 checkbox ...
... (Gp36) protein_list protein q P03726 checkbox ...
... (Internal core protein gp16) xrefs PDB links ...
... 7K5C 7K5C protein_list protein q O41043 checkbox ...
... Pre-neck appendage protein (Gene product 12) ...
... 12) (gp12) (Late protein GP12) (NP1) (Protein ...
... protein GP12) (NP1) ( Protein p12) _form post ...
... submit protein_list protein q P20345 checkbox ...
... Pre-neck appendage protein (Gene product 12) ...
... 12) (gp12) (NP1) ( Protein p12) xrefs PDB links ...
... 6QZF 6QZF protein_list protein q Q37893 checkbox ...
... B103) protein_list protein q P07537 checkbox ...
... note Preneck appendage protein (Gene product 12) ...
... product 12) (gp12) ( Protein p12) upcount 6 entries ...
... upgroup Tail spike protein (Depolymerase, capsule ...
... submit protein_list protein q Q858F5 checkbox ...
... strain note Tail spike protein (TSP) ...
... (gp20) protein_list protein q P49714 checkbox ...
... strain note Tail spike protein (TSP) (Endo-N) ...
... (EndoNE) protein_list protein q Q04830 checkbox ...
... strain note Tail spike protein (TSP) (Endo-N) ...
... 3JU4 3JU4 protein_list protein q P12528 checkbox ...
... strain note Tail spike protein (TSP) (EC 3.2.1.-) ...
... 8U1O 8U1O protein_list protein q O09496 checkbox ...
... 2X3H 2X3H protein_list protein q Q9XJP3 checkbox ...
... SfVI) note Tail spike protein (TSP) (EC 3.2.1.-) ...
... upgroup Morphogenesis protein 1 (Gene product 13) ...
... product 13) (gp13) ( Protein p13) _form post ...
... submit protein_list protein q P15132 checkbox ...
... 3CT5 3CT5 protein_list protein q P07538 checkbox ...
... submit protein_list protein q P15316 checkbox ...
... submit protein_list protein q Q54699 checkbox ...
... central spike protein Gp5 (Pre-Gp5) ...
... submit protein_list protein q P16009 checkbox ...
... upgroup DNA terminal protein (Gene product 3) (gp3) ...
... product 3) (gp3) ( Protein p3) _form post ...
... submit protein_list protein q P03681 checkbox ...
... note Primer terminal protein (TP) (DNA terminal ...
... (TP) (DNA terminal protein) (Gene product 3) ...
... product 3) (gp3) ( Protein p3) (Terminal protein) ...
... (Protein p3) (Terminal protein) xrefs PDB links note ...
... 2EX3 2EX3 protein_list protein q Q37883 checkbox ...
... B103) protein_list protein q P06812 checkbox ...
... Nf) protein_list protein q P06951 checkbox ...
... Probable tape measure protein (TMP) ...
... submit protein_list protein q O64046 checkbox ...
... strain protein_list protein q Q6QGE7 checkbox ...
... note Tape measure protein pb2 precursor ...
... (Pore-forming protein pb2) (Tail protein ...
... protein pb2) (Tail protein pb2) xrefs PDB links ...
... upgroup Tail tubular protein A (TTPA) ...
... submit protein_list protein q D1L2W4 checkbox ...
... 5MU4 5MU4 protein_list protein q D1L2Y9 checkbox ...
... note Tail tubular protein A (TTPA) ...
... hidden Crystal structure of Escherichia coli ...
... PMID 18077713 hidden Structure of the ...
... genomic and structural analysis David Schwarzer, Falk ...