Deltapapillomavirus (taxid:325454)

VIRION

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Non-enveloped. Small, icosahedral, about 60 nm in size. A single molecule of circular dsDNA is contained within the capsid, which is composed of 72 pentamers arranged on a T = 7 lattice.
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GENOME

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Circular dsDNA, about 8 kb in size, associated with cellular histones.
On rare non-specific recombination, the viral genome can be integrated in host chromosome. This inactivates the integrated virus but can gives the host cell a replicative advantage sometimes leading to malignant tumours.

GENE EXPRESSION

Only one strand of the genome is transcribed and yield two classes of proteins expressed by alternative splicing :
a) Early Proteins: non-structural regulatory proteins (E1-E7).
b) Late Proteins: the structural proteins L1 and L2.

REPLICATION

NUCLEAR

Replication is divided in two distinct steps that are linked to the differentiation state of the host epithelial cell:

a) The plasmid replication takes place in the basal squamous epithelial cells. It corresponds to viral DNA replication in synchrony with the host cell chromosome in order to ensures an average of one viral genome per basal cell.

  1. Attachment of the viral proteins to host receptors mediates endocytosis into vesicles in the basal squamous epithelial cell.
  2. Transport to the nucleus and uncoating of the viral DNA.
  3. Early-region transcription and translation of the early proteins.
  4. Steady-state viral DNA nuclear replication. Requires the origin of DNA replication in cis and the viral E1 and E2 proteins in trans.

b) The vegetative replication, which occurs in differentiated keratinocytes. In these cells, which no longer undergo cellular DNA synthesis, there is a burst of viral DNA synthesis with active production of virions.

  1. Vegetative viral DNA synthesis.
  2. Transcription of the late region.
  3. Capsid proteins L1 and L2 synthesis.
  4. Nuclear capsid assembly and release of viruses.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

35 entries grouped by protein

4 entries

Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1)

Select_allDeselect_all
VE1_BPV1
Bovine papillomavirus type 1 reference strain
VE1_OVPVD
Odocoileus virginianus papillomavirus 1 (DPV) (Deer papillomavirus) reference strain
VE1_PAPVE
European elk papillomavirus (EEPV) reference strain
VE1_BPV2
Bos taurus papillomavirus 2 (Bovine papillomavirus 2)

4 entries

Regulatory protein E2

Select_allDeselect_all
VE2_BPV1
Bovine papillomavirus type 1 reference strain
VE2_OVPVD
Odocoileus virginianus papillomavirus 1 (DPV) (Deer papillomavirus) reference strain
VE2_PAPVE
European elk papillomavirus (EEPV) reference strain
VE2_BPV2
Bos taurus papillomavirus 2 (Bovine papillomavirus 2)

1 entry

Probable protein E3

VE3_BPV2
Bos taurus papillomavirus 2 (Bovine papillomavirus 2)

3 entries

Probable protein E4

Select_allDeselect_all
VE4_BPV1
Bovine papillomavirus type 1 reference strain

Protein E4

VE4_OVPVD
Odocoileus virginianus papillomavirus 1 (DPV) (Deer papillomavirus) reference strain
VE4_BPV2
Bos taurus papillomavirus 2 (Bovine papillomavirus 2)

4 entries

Protein E5

Select_allDeselect_all
VE5_BPV1
Bovine papillomavirus type 1 reference strain
VE5_PAPVE
European elk papillomavirus (EEPV) reference strain
VE5_BPV2
Bos taurus papillomavirus 2 (Bovine papillomavirus 2)
VE5_PAPVR
Reindeer papillomavirus (RPV)

4 entries

Protein E6

Select_allDeselect_all
VE6_BPV1
Bovine papillomavirus type 1 reference strain
VE6_OVPVD
Odocoileus virginianus papillomavirus 1 (DPV) (Deer papillomavirus) reference strain
VE6_PAPVE
European elk papillomavirus (EEPV) reference strain
VE6_BPV2
Bos taurus papillomavirus 2 (Bovine papillomavirus 2)

4 entries

Protein E7

Select_allDeselect_all
VE7_BPV1
Bovine papillomavirus type 1 reference strain
VE7_OVPVD
Odocoileus virginianus papillomavirus 1 (DPV) (Deer papillomavirus) reference strain
VE7_PAPVE
European elk papillomavirus (EEPV) reference strain
VE7_BPV2
Bos taurus papillomavirus 2 (Bovine papillomavirus 2)

1 entry

Uncharacterized protein E8

VE8_BPV2
Bos taurus papillomavirus 2 (Bovine papillomavirus 2)

1 entry

Protein E8^E2C

VE8E2_BPV1
Bovine papillomavirus type 1 reference strain

4 entries

Major capsid protein L1

Select_allDeselect_all
VL1_BPV1
Bovine papillomavirus type 1 reference strain
VL1_OVPVD
Odocoileus virginianus papillomavirus 1 (DPV) (Deer papillomavirus) reference strain
VL1_PAPVE
European elk papillomavirus (EEPV) reference strain
VL1_BPV2
Bos taurus papillomavirus 2 (Bovine papillomavirus 2)

4 entries

Minor capsid protein L2

Select_allDeselect_all
VL2_BPV1
Bovine papillomavirus type 1 reference strain
VL2_OVPVD
Odocoileus virginianus papillomavirus 1 (DPV) (Deer papillomavirus) reference strain
VL2_PAPVE
European elk papillomavirus (EEPV) reference strain
VL2_BPV2
Bos taurus papillomavirus 2 (Bovine papillomavirus 2)

1 entry

Probable protein L3

VL3_OVPVD
Odocoileus virginianus papillomavirus 1 (DPV) (Deer papillomavirus) reference strain
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Bos taurus papillomavirus 13 taxid:1887213

Protein ModelArchive
E4 ma-jd-viral-65364
E5 (E5 protein) ma-jd-viral-65546
Major capsid protein L1 ma-jd-viral-67230
Minor capsid protein L2 ma-jd-viral-44921
Protein E6 ma-jd-viral-00852
Protein E7 ma-jd-viral-13638
Regulatory protein E2 ma-jd-viral-61087
Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1) ma-jd-viral-21324

Camelus dromedarius papillomavirus 1 taxid:996650

Protein ModelArchive
E1^E4 ma-jd-viral-37927
E7 ma-jd-viral-13635
Major capsid protein L1 ma-jd-viral-67303
Minor capsid protein L2 ma-jd-viral-44986
Protein E6 ma-jd-viral-00870
Regulatory protein E2 ma-jd-viral-61139
Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1) ma-jd-viral-21336

Camelus dromedarius papillomavirus 2 taxid:996651

Protein ModelArchive
E1^E4 ma-jd-viral-37926
E7 ma-jd-viral-13640
Major capsid protein L1 ma-jd-viral-67347
Minor capsid protein L2 ma-jd-viral-44997
Protein E6 ma-jd-viral-00860
Regulatory protein E2 ma-jd-viral-61057
Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1) ma-jd-viral-21308

Capreolus capreolus papillomavirus 1 taxid:470214

Protein ModelArchive
E4 ma-jd-viral-65363
E5 ma-jd-viral-65547
Major capsid protein L1 ma-jd-viral-67237
Minor capsid protein L2 ma-jd-viral-44919
Protein E6 ma-jd-viral-00844
Protein E7 ma-jd-viral-13637
Regulatory protein E2 ma-jd-viral-61146
Replication protein E1 (EC 3.6.4.12) (ATP-dependent helicase E1) ma-jd-viral-21283