Viral genome packaging (kw:KW-0231)

Large dsDNA bacteriophages, herpesviruses, adenoviruses and microviruses encode a powerful DNA-translocating machinenery that encapsidates a viral genome into a preassembled capsid or procapsid

The packaging machine is often composed of a portal structure, which provides a gate for DNA entry, and an ATP-driven motor

. This motor is composed of the large subunit whose ATPase activity fuels DNA translocation, and most frequently, a small subunit that binds to the viral packaging site. DNA cleavage can be coupled to genome packaging

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

258 entries grouped by protein

reorder by strain

8 entries

Pre-hexon-linking protein IIIa (Capsid vertex-specific component IIIa) (CVSC) (Protein IIIa) (pIIIa)

CAP3_ADE02

Human adenovirus C serotype 2 (HAdV-2) (Human adenovirus 2) reference strain

CAP3_ADE05

Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5) reference strain

6B1T; 6CGV; 7S78

CAP3_ADE12

Human adenovirus A serotype 12 (HAdV-12) (Human adenovirus 12) reference strain

CAP3_ADEG1

Fowl adenovirus A serotype 1 (strain CELO / Phelps) (FAdV-1) (Avian adenovirus gal1 (strain Phelps)) reference strain

CAP3_ADES1

Snake adenovirus serotype 1 (SnAdV-1) reference strain

CAP3_ADECC

Canine adenovirus serotype 1 (strain CLL) (CAdV-1) (Canine adenovirus 1 (strain CLL))

CAP3_ADECR

Canine adenovirus serotype 1 (strain RI261) (CAdV-1) (Canine adenovirus 1 (strain RI261))

CAP3_ADEM1

Murine adenovirus A serotype 1 (MAdV-1) (Murine adenovirus 1)

17 entries

Capsid vertex component 1

CVC1_ALHV1

Alcelaphine herpesvirus 1 (strain C500) (AlHV-1) (Malignant catarrhal fever virus) reference strain

CVC1_EBVB9

Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4) reference strain

6W2D; 6W2E; 7BQX; 7BR7

CVC1_EHV1B

Equine herpesvirus 1 (strain Ab4p) (EHV-1) (Equine abortion virus) reference strain

CVC1_EHV2

Equine herpesvirus 2 (strain 86/87) (EHV-2) reference strain

CVC1_GAHVM

Gallid herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) (GaHV-2) (Marek's disease herpesvirus type 1) reference strain

CVC1_HCMVA

Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5) reference strain

7ET3; 8TEP; 8TES; 8TET; 8TEU; 8TEW

CVC1_HCMVM

Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5) reference strain

CVC1_HHV11

Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain

8XA0

CVC1_HHV2H

Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain

6M6G; 6M6H

CVC1_HHV6U

Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus) reference strain

CVC1_HHV6Z

Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus) reference strain

CVC1_HHV7J

Human herpesvirus 7 (strain JI) (HHV-7) (Human T lymphotropic virus) reference strain

CVC1_HHV8P

Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) reference strain

6PPB; 6PPH

CVC1_PSHV1

Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus) reference strain

CVC1_SHV21

Saimiriine herpesvirus 2 (strain 11) (SaHV-2) (Herpesvirus saimiri) reference strain

CVC1_VZVD

Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3) reference strain

CVC1_ELHVK

Elephantid herpesvirus 1 (isolate Asian elephant/Berlin/Kiba/1998) (EIHV-1) (Elephant endotheliotropic herpesvirus)

21 entries

Capsid vertex component 2

CVC2_ALHV1

Alcelaphine herpesvirus 1 (strain C500) (AlHV-1) (Malignant catarrhal fever virus) reference strain

CVC2_EBVA8

Epstein-Barr virus (strain AG876) (HHV-4) (Human herpesvirus 4) reference strain

CVC2_EBVB9

Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4) reference strain

6W2D; 6W2E; 7BQX; 7BR7

CVC2_EHV1B

Equine herpesvirus 1 (strain Ab4p) (EHV-1) (Equine abortion virus) reference strain

CVC2_EHV2

Equine herpesvirus 2 (strain 86/87) (EHV-2) reference strain

CVC2_GAHVM

Gallid herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) (GaHV-2) (Marek's disease herpesvirus type 1) reference strain

CVC2_HCMVA

Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5) reference strain

7ET3; 7NXP; 8TEP; 8TES; 8TET; 8TEU; 8TEW

CVC2_HCMVM

Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5) reference strain

CVC2_HHV11

Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain

2F5U; 8XA0

CVC2_HHV2H

Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain

6M6G; 6M6H

CVC2_HHV6U

Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus) reference strain

CVC2_HHV6Z

Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus) reference strain

CVC2_HHV7J

Human herpesvirus 7 (strain JI) (HHV-7) (Human T lymphotropic virus) reference strain

CVC2_HHV8P

Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) reference strain

6PPB; 6PPH; 7NXQ

CVC2_PSHV1

Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus) reference strain

CVC2_SHV21

Saimiriine herpesvirus 2 (strain 11) (SaHV-2) (Herpesvirus saimiri) reference strain

CVC2_VZVD

Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3) reference strain

CVC2_EBVG

Epstein-Barr virus (strain GD1) (HHV-4) (Human gammaherpesvirus 4)

CVC2_EHV1V

Equine herpesvirus 1 (strain V592) (EHV-1) (Equine abortion virus)

CVC2_ELHVK

Elephantid herpesvirus 1 (isolate Asian elephant/Berlin/Kiba/1998) (EIHV-1) (Elephant endotheliotropic herpesvirus)

CVC2_ILTVT

Infectious laryngotracheitis virus (strain Thorne V882) (ILTV) (Gallid herpesvirus 1)

1 entry

DNA N-6-adenine-methyltransferase (DAM) (EC 2.1.1.72) (EcoP1I DNA MTase) (M.EcoP1I) (Type II methyltransferase M.EphP1ORF2P) (M.EphP1ORF2P)

1 entry

DNA-packaging protein FI

4 entries

DNA-binding protein J (J protein) (Small core protein)

J_BPAL3

Escherichia phage alpha3 (Bacteriophage alpha-3) reference strain

1M06

J_BPG4

Escherichia phage G4 (Bacteriophage G4) reference strain

1GFF

J_BPPHS

Enterobacteria phage phiX174 (Isolate Sanger) (Bacteriophage phi-X174) reference strain

1RB8; 2BPA

J_BPPHK

Enterobacteria phage phiK (Bacteriophage phi-K)

15 entries

Initiator protein NS1 (NS1) (EC 3.1.21.-) (EC 3.6.4.12) (NCVP1) (Non-capsid protein NS-1) (Non-structural protein 1) (Non-structural protein NS1)

NS1_AADNV

Aedes albopictus densovirus (isolate Boublik/1994) (AalDNV) reference strain

Initiator protein NS1 (NS1) (EC 3.1.21.-) (EC 3.6.4.12) (Non-structural protein 1) (Non-structural protein NS1)

NS1_ADVG

Aleutian mink disease parvovirus (strain G) (ADV) reference strain

Initiator protein NS1 (NS1) (EC 3.1.21.-) (EC 3.6.4.12) (Non-structural protein 1) (Non-structural protein NS1)

NS1_JDNVP

Junonia coenia densovirus (isolate pBRJ/1990) (JcDNV) reference strain

Initiator protein NS1 (NS1) (EC 3.1.21.-) (EC 3.6.4.12) (Non-structural protein 1) (Non-structural protein NS1)

NS1_MUMIP

Murine minute virus (strain MVM prototype) (MVM) (Murine minute virus (strain MVM(p))) reference strain

Initiator protein NS1 (NS1) (EC 3.1.21.-) (EC 3.6.4.12) (NCVP1) (Non-capsid protein NS-1) (Non-structural protein NS1)

3WRN; 3WRO; 3WRQ; 3WRR; 3WRS; 4PP4; 4R94

NS1_AEDEV

Aedes densonucleosis virus (strain GKV 002 002) (Aedes densovirus)

Initiator protein NS1 (NS1) (EC 3.1.21.-) (EC 3.6.4.12) (Non-structural protein 1) (Non-structural protein NS1)

NS1_BMDNV

Bombyx mori densovirus (BmDNV) (Bombyx densonucleosis virus)

Initiator protein NS1 (NS1) (EC 3.1.21.-) (EC 3.6.4.12) (Non-structural protein 1) (Non-structural protein NS1)

NS1_DSDNV

Diatraea saccharalis densovirus (DsDNV)

Initiator protein NS1 (NS1) (EC 3.1.21.-) (EC 3.6.4.12) (Non-structural protein 1) (Non-structural protein NS1)

NS1_FPV19

Feline panleukopenia virus (strain 193) (FPV)

NS1_MEVA

Mink enteritis virus (strain Abashiri) (MEV)

NS1_MUMIM

Murine minute virus (strain MVMi) (MVM) (Murine parvovirus)

NS1_PAVCN

Canine parvovirus type 2 (isolate Dog/United States/CPV-N/1978) (CPV-2)

NS1_PAVHH

Hamster parvovirus H1

NS1_PAVL3

Parvovirus LuIII

NS1_PAVPK

Porcine parvovirus (strain Kresse) (PPV)

NS1_PAVPN

Porcine parvovirus (strain NADL-2) (PPV)

1 entry

Packaging enzyme P4 (EC 3.6.1.15)

1 entry

Assembly protein P7

1 entry

Putative packaging signal terminase (PAC site terminase)

11 entries

Packaging protein 1 (Packaging protein IVa2)

PKG1_ADE02

Human adenovirus C serotype 2 (HAdV-2) (Human adenovirus 2) reference strain

PKG1_ADE05

Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5) reference strain

PKG1_ADE12

Human adenovirus A serotype 12 (HAdV-12) (Human adenovirus 12) reference strain

PKG1_ADE40

Human adenovirus F serotype 40 (HAdV-40) (Human adenovirus 40) reference strain

PKG1_ADECT

Canine adenovirus serotype 2 (strain Toronto A 26-61) (CAdV-2) (Canine adenovirus 2 (strain Toronto A 26-61)) reference strain

PKG1_ADEG1

Fowl adenovirus A serotype 1 (strain CELO / Phelps) (FAdV-1) (Avian adenovirus gal1 (strain Phelps)) reference strain

PKG1_ADES1

Snake adenovirus serotype 1 (SnAdV-1) reference strain

PKG1_ADE07

Human adenovirus B serotype 7 (HAdV-7) (Human adenovirus 7)

PKG1_ADECC

Canine adenovirus serotype 1 (strain CLL) (CAdV-1) (Canine adenovirus 1 (strain CLL))

PKG1_ADECR

Canine adenovirus serotype 1 (strain RI261) (CAdV-1) (Canine adenovirus 1 (strain RI261))

PKG1_ADEM1

Murine adenovirus A serotype 1 (MAdV-1) (Murine adenovirus 1)

3 entries

DNA packaging protein (ATPase gp16) (EC 3.6.4.-) (Gene product 16) (gp16) (Protein p16)

PKG16_BPPH2

Bacillus phage phi29 (Bacteriophage phi-29) reference strain

5HD9; 6V1W; 7CNB; 7JQQ

PKG16_BPB03

Bacillus phage B103 (Bacteriophage B103)

PKG16_BPPZA

Bacillus phage PZA (Bacteriophage PZA)

2 entries

Packaging protein 2 (Packaging protein 22K) (L4-22K)

PKG2_ADE02

Human adenovirus C serotype 2 (HAdV-2) (Human adenovirus 2) reference strain

PKG2_ADE05

Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5) reference strain

1 entry

Packaging protein P20

1 entry

Packaging protein P22 (GpK) (Protein K)

7 entries

Packaging protein 3 (L1-52/55 kDa protein) (Packaging protein 52K)

PKG3_ADE02

Human adenovirus C serotype 2 (HAdV-2) (Human adenovirus 2) reference strain

PKG3_ADE05

Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5) reference strain

PKG3_ADE12

Human adenovirus A serotype 12 (HAdV-12) (Human adenovirus 12) reference strain

PKG3_ADEG1

Fowl adenovirus A serotype 1 (strain CELO / Phelps) (FAdV-1) (Avian adenovirus gal1 (strain Phelps)) reference strain

PKG3_ADES1

Snake adenovirus serotype 1 (SnAdV-1) reference strain

PKG3_ADECC

Canine adenovirus serotype 1 (strain CLL) (CAdV-1) (Canine adenovirus 1 (strain CLL))

PKG3_ADECR

Canine adenovirus serotype 1 (strain RI261) (CAdV-1) (Canine adenovirus 1 (strain RI261))

1 entry

Packaging efficiency factor P6

1 entry

DNA packaging ATPase P9 (Protein P9)

58 entries

Portal protein

PORTL_ALHV1

Alcelaphine herpesvirus 1 (strain C500) (AlHV-1) (Malignant catarrhal fever virus) reference strain

PORTL_BP234

Thermus virus P23-45 (Thermus thermophilus phage P23-45) reference strain

Portal protein (Gene product 86) (gp86)

6QJT

PORTL_BP44A

Staphylococcus phage 44AHJD reference strain

Portal protein (Connector protein) (Gene product 19) (gp19) (Head-to-tail connector) (Probable portal protein) (Upper collar protein)

PORTL_BPAPS

Acyrthosiphon pisum secondary endosymbiont phage 1 (Bacteriophage APSE-1) reference strain

Portal protein (Gene product 19) (Gp19) (Head-to-tail connector)

PORTL_BPBPP

Bordetella phage BPP-1 reference strain

Probable portal protein (Gene product 21) (gp21) (Head-to-tail connector)

PORTL_BPCA1

Bacteroides phage crAss001 (Bacteroides phage PhiCrAss001) reference strain

Portal protein (Gene product 20) (gp20)

7QOG; 7QOH; 7QOI; 7QOJ; 7QOL; 8CKB

PORTL_BPE15

Salmonella phage epsilon15 reference strain

Portal protein (Head-to-tail connector)

PORTL_BPHA1

Halomonas phage phiHAP-1 (isolate -/Gulf of Mexico/-/2001) (Bacteriophage phiHAP-1) reference strain

Probable portal protein

PORTL_BPHC1

Haemophilus phage HP1 (strain HP1c1) (Bacteriophage HP1) reference strain

Probable portal protein (ORF15)

PORTL_BPKHP

Helicobacter pylori bacteriophage KHP30 reference strain

Portal protein (Head-to-tail connector gp8) (Putative portal protein ORF17)

7WMP

PORTL_BPKMV

Pseudomonas phage phiKMV reference strain

Portal protein (Head-to-tail connector)

PORTL_BPKVM

Vibrio phage KVP40 (isolate Vibrio parahaemolyticus/Japan/Matsuzaki/1991) (KVP40) (Bacteriophage KVP40) reference strain

Portal protein (gp20)

PORTL_BPLSK

Lactococcus phage SK1 (Lactococcus lactis bacteriophage SK1) reference strain

Probable portal protein (Gene product 4) (gp4) (Putative portal protein)

PORTL_BPMD2

Mycobacterium phage D29 (Mycobacteriophage D29) reference strain

Portal protein (Gene product 14) (gp14) (Portal vertex protein)

PORTL_BPML5

Mycobacterium phage L5 (Mycobacteriophage L5) reference strain

Portal protein (Gene product 14) (gp14) (Portal vertex protein)

PORTL_BPMU

Escherichia phage Mu (Bacteriophage Mu) reference strain

Portal protein (Gene product 29) (gp29) (Gene product H) (gpH) (Head-tail connector)

9KHX; 9KNU

PORTL_BPN15

Escherichia phage N15 (Bacteriophage N15) reference strain

PORTL_BPN4

Enterobacteria phage N4 (Bacteriophage N4) reference strain

Probable portal protein (94 kDa protein) (Gene product 59) (gp59) (Head-to-tail connector)

PORTL_BPP2

Escherichia phage P2 (Bacteriophage P2) reference strain

Probable portal protein (GpQ)

PORTL_BPP22

Salmonella phage P22 (Bacteriophage P22) reference strain

Portal protein (Gene product 1) (Gp1) (Head-to-tail connector)

3LJ5; 4V4K; 5GAI; 5JJ1; 5JJ3; 8EAO; 8TVU; 8U10; 8U11; 9KYW

PORTL_BPPCD

Clostridium phage phiCD119 (strain Clostridium difficile/United States/Govind/2006) (Bacteriophage phiCD119) reference strain

Portal protein (Portal vertex protein)

PORTL_BPPH2

Bacillus phage phi29 (Bacteriophage phi-29) reference strain

Portal protein (Connector protein) (Gene product 10) (gp10) (Gene product 19) (gp19) (Head-to-tail connector) (Probable portal protein) (Protein p10) (Upper collar protein)

1FOU; 1H5W; 1IJG; 1JNB; 6QX7; 6QYJ; 6QYM; 6QZ9; 6QZF

PORTL_BPPHC

Streptomyces phage phiC31 (Bacteriophage phi-C31) reference strain

Probable portal protein

PORTL_BPPHE

Enterococcus phage phiEF24C (Enterococcus bacteriophage phi-EF24C) reference strain

Probable portal protein

PORTL_BPSAV

Salmonella phage ViI reference strain

Portal protein (gp20)

PORTL_BPSP1

Bacillus phage SP01 (Bacteriophage SP01) reference strain

Probable portal protein

PORTL_BPSP6

Enterobacteria phage SP6 (Bacteriophage SP6) reference strain

Portal protein (Head-to-tail connector)

PORTL_BPSPP

Bacillus phage SPP1 (Bacteriophage SPP1) reference strain

Portal protein (Gene product 6) (gp6) (Portal vertex protein)

2JES; 5A20; 5A21; 7Z4W

PORTL_BPT4

Enterobacteria phage T4 (Bacteriophage T4) reference strain

Portal protein (Gene product 20) (gp20)

3JA7; 6UZC

PORTL_BPT5

Escherichia phage T5 (Enterobacteria phage T5) reference strain

Portal protein (Capsid protein pb7)

9ILP; 9IMV

PORTL_BPT7

Escherichia phage T7 (Bacteriophage T7) reference strain

Portal protein (Gene product 8) (Gp8) (Head-to-tail connector)

3J4A; 6QWP; 6QX5; 6QXM; 6R21; 6TJP; 7BOU; 7BP0; 7EY6; 7EY8; 8E4G; 9JYZ; 9JZ0

PORTL_BPTWO

Staphylococcus phage Twort (strain DSM 17442 / HER 48) (Bacteriophage Twort) reference strain

Probable portal protein

PORTL_EBVA8

Epstein-Barr virus (strain AG876) (HHV-4) (Human herpesvirus 4) reference strain

PORTL_EBVB9

Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4) reference strain

7BQT

PORTL_EHV1B

Equine herpesvirus 1 (strain Ab4p) (EHV-1) (Equine abortion virus) reference strain

PORTL_EHV2

Equine herpesvirus 2 (strain 86/87) (EHV-2) reference strain

PORTL_GAHVM

Gallid herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) (GaHV-2) (Marek's disease herpesvirus type 1) reference strain

PORTL_HCMVA

Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5) reference strain

7ET2; 7ETM; 8HEU; 8HEV

PORTL_HCMVM

Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5) reference strain

PORTL_HHV11

Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain

PORTL_HHV2H

Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain

PORTL_HHV6U

Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus) reference strain

PORTL_HHV6Z

Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus) reference strain

PORTL_HHV7J

Human herpesvirus 7 (strain JI) (HHV-7) (Human T lymphotropic virus) reference strain

PORTL_HHV8P

Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) reference strain

6PPI

PORTL_LAMBD

Escherichia phage lambda (Bacteriophage lambda) reference strain

Portal protein B (GpB) (Minor capsid protein B)

8K38; 8K39; 8XOT; 8XOU; 8XOW; 8XPM; 8XQB

PORTL_PSHV1

Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus) reference strain

PORTL_SHV21

Saimiriine herpesvirus 2 (strain 11) (SaHV-2) (Herpesvirus saimiri) reference strain

PORTL_VZVD

Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3) reference strain

PORTL_BPB03

Bacillus phage B103 (Bacteriophage B103)

Portal protein (Gene product 10) (gp10) (Head-to-tail connector) (Upper collar protein)

PORTL_BPG20

Thermus phage G20c (Thermus thermophilus phage G20c)

Portal protein (Gene product 81) (gp81)

6IBG

PORTL_BPHK7

Enterobacteria phage HK97 (Bacteriophage HK97)

Portal protein (GP3)

8CEZ; 8FQL

PORTL_BPLP2

Lactococcus phage p2 (Lactococcus lactis bacteriophage p2)

Probable portal protein (Gene product 4) (gp4)

PORTL_BPP21

Enterobacteria phage P21 (Bacteriophage 21) (Bacteriophage P21)

Portal protein B (GpB) (Minor capsid protein B)

PORTL_BPPZA

Bacillus phage PZA (Bacteriophage PZA)

Portal protein (Connector protein) (Gene product 10) (gp10) (Gene product 19) (gp19) (Head-to-tail connector) (Probable portal protein) (Protein p10) (Upper collar protein)

PORTL_BPT3

Enterobacteria phage T3 (Bacteriophage T3)

Portal protein (Gene product 8) (Gp8) (Head-to-tail connector)

PORTL_EBVG

Epstein-Barr virus (strain GD1) (HHV-4) (Human gammaherpesvirus 4)

6RVR; 6RVS

PORTL_EHV1V

Equine herpesvirus 1 (strain V592) (EHV-1) (Equine abortion virus)

4 entries

Protein 33K (L4-33K) (Splicing factor 33K) (Terminase, small subunit)

SF33K_ADE02

Human adenovirus C serotype 2 (HAdV-2) (Human adenovirus 2) reference strain

SF33K_ADE05

Human adenovirus C serotype 5 (HAdV-5) (Human adenovirus 5) reference strain

SF33K_ADE40

Human adenovirus F serotype 40 (HAdV-40) (Human adenovirus 40) reference strain

SF33K_ADE41

Human adenovirus F serotype 41 (HAdV-41) (Human adenovirus 41)

17 entries

Terminase large subunit (DNA-packaging protein) (Gene product 2) (gp2)

TERL_BP234

Thermus virus P23-45 (Thermus thermophilus phage P23-45) reference strain

Terminase, large subunit (DNA-packaging protein) (Gene product 85) (gp85)

TERL_BPHK7

Enterobacteria phage HK97 (Bacteriophage HK97) reference strain

Terminase, large subunit (DNA-packaging protein gp2)

6Z6D

TERL_BPLSK

Lactococcus phage SK1 (Lactococcus lactis bacteriophage SK1) reference strain

TERL_BPMU

Escherichia phage Mu (Bacteriophage Mu) reference strain

Probable terminase, large subunit gp28 (EC 3.1.-.-) (Gene product 28) (gp28) (Gene product E) (gpE) (Pacase, large subunit) (Packaging protein E)

TERL_BPP1

Escherichia phage P1 (Bacteriophage P1) reference strain

Probable terminase, large subunit (EC 3.1.-.-) (DNA-packaging protein B) (PACase B protein) (Terminase B protein) (Terminase large subunit)

TERL_BPP22

Salmonella phage P22 (Bacteriophage P22) reference strain

Terminase, large subunit (DNA-packaging protein gp2)

4DKW; 6VI1; 6XMI

TERL_BPSF5

Shigella phage SfV (Shigella flexneri bacteriophage V) (Bacteriophage SfV) reference strain

Putative terminase large subunit

TERL_BPSPP

Bacillus phage SPP1 (Bacteriophage SPP1) reference strain

Terminase, large subunit (DNA-packaging protein) (Gene product 2) (gp2)

2WBN; 2WC9

TERL_BPT4

Enterobacteria phage T4 (Bacteriophage T4) reference strain

Terminase, large subunit (DNA-packaging protein) (Gene product 17) (gp17)

2O0H; 2O0J; 2O0K; 3CPE; 3EZK

TERL_BPT5

Escherichia phage T5 (Enterobacteria phage T5) reference strain

Terminase, large subunit (DNA-packaging protein)

TERL_BPT7

Escherichia phage T7 (Bacteriophage T7) reference strain

Terminase, large subunit (DNA-packaging protein) (Gene product 19) (Gp19)

4BIJ; 4BIL

TERL_LAMBD

Escherichia phage lambda (Bacteriophage lambda) reference strain

Terminase, large subunit (DNA-packaging protein A) (Large terminase protein) (gpA)

TERL_BPG20

Thermus phage G20c (Thermus thermophilus phage G20c)

Terminase, large subunit (DNA-packaging protein) (DNA-packaging protein gp80) (Gene product 80) (gp80)

5M1F; 5M1K; 5M1N; 5M1O; 5M1P; 5M1Q

TERL_BPLP2

Lactococcus phage p2 (Lactococcus lactis bacteriophage p2)

TERL_BPP21

Enterobacteria phage P21 (Bacteriophage 21) (Bacteriophage P21)

Terminase, large subunit (DNA-packaging protein) (DNA-packaging protein gp2) (Gene product 2) (gp2) (Large terminase protein)

TERL_BPP7

Enterobacteria phage P7 (Bacteriophage P7)

Probable terminase, large subunit (EC 3.1.-.-) (DNA-packaging protein B) (PACase B protein) (Terminase B protein)

TERL_BPT3

Enterobacteria phage T3 (Bacteriophage T3)

Terminase, large subunit (DNA-packaging protein) (Gene product 19) (gp19)

1 entry

Primer terminal protein (TP) (DNA terminal protein) (Gene product 3) (gp3) (Protein p3) (Terminal protein)

16 entries

Terminase small subunit (Gene product 1) (gp1)

TERS_BP234

Thermus virus P23-45 (Thermus thermophilus phage P23-45) reference strain

Terminase, small subunit (DNA-packaging protein gp84) (Gene product 84) (gp84)

TERS_BP80A

Staphylococcus phage 80alpha reference strain

Terminase small subunit

TERS_BPHK7

Enterobacteria phage HK97 (Bacteriophage HK97) reference strain

Terminase, small subunit (DNA-packaging protein gp1)

6Z6E; 8POP

TERS_BPLSK

Lactococcus phage SK1 (Lactococcus lactis bacteriophage SK1) reference strain

TERS_BPMU

Escherichia phage Mu (Bacteriophage Mu) reference strain

Probable terminase, small subunit gp27 (Gene product 27) (gp27) (Gene product D) (gpD) (Pacase, small subunit) (Packaging protein D)

TERS_BPP22

Salmonella phage P22 (Bacteriophage P22) reference strain

Terminase, small subunit (DNA-packaging protein gp3)

3P9A

TERS_BPSPP

Bacillus phage SPP1 (Bacteriophage SPP1) reference strain

Terminase small subunit (G1P) (Terminase, small subunit gp1)

TERS_BPT4

Enterobacteria phage T4 (Bacteriophage T4) reference strain

Terminase, small subunit (Gene product 16) (gp16) (Packaging protein Gp16)

TERS_BPT7

Escherichia phage T7 (Bacteriophage T7) reference strain

Terminase, small subunit gp18 (DNA-packaging protein A) (Gene product 18) (Gp18)

TERS_LAMBD

Escherichia phage lambda (Bacteriophage lambda) reference strain

Terminase small subunit (EC 3.6.4.-) (DNA-packaging protein Nu1) (Gene product Nu1) (gpNu1)

1J9I; 6HN7; 7LW0

TERS_BPG20

Thermus phage G20c (Thermus thermophilus phage G20c)

Terminase, small subunit (DNA-packaging protein gp79) (Gene product 79) (gp79)

4XVN; 6EJQ

TERS_BPLP2

Lactococcus phage p2 (Lactococcus lactis bacteriophage p2)

TERS_BPLP7

Enterobacteria phage LP7 (Bacteriophage LP7)

Terminase, small subunit (DNA-packaging protein gp3)

TERS_BPP21

Enterobacteria phage P21 (Bacteriophage 21) (Bacteriophage P21)

Terminase, small subunit (Gp1)

7LWR

TERS_BPRH5

Bacillus phage rho15 (Bacteriophage rho-15)

Terminase small subunit (G1P)

TERS_BPSF6

Bacillus phage SF6 (Bacteriophage SF6)

Terminase small subunit (G1P) (Terminase, small subunit)

2CMP; 3ZQM; 3ZQN; 3ZQO; 3ZQP; 3ZQQ; 4ZC3

25 entries

Tripartite terminase subunit 1

TRM1_ALHV1

Alcelaphine herpesvirus 1 (strain C500) (AlHV-1) (Malignant catarrhal fever virus) reference strain

TRM1_EBVB9

Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4) reference strain

TRM1_EHV1B

Equine herpesvirus 1 (strain Ab4p) (EHV-1) (Equine abortion virus) reference strain

TRM1_EHV2

Equine herpesvirus 2 (strain 86/87) (EHV-2) reference strain

TRM1_GAHVM

Gallid herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) (GaHV-2) (Marek's disease herpesvirus type 1) reference strain

TRM1_HCMVA

Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5) reference strain

TRM1_HCMVM

Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5) reference strain

TRM1_HHV11

Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain

6M5R; 6M5S; 6M5U; 6M5V

TRM1_HHV2H

Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain

TRM1_HHV6U

Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus) reference strain

TRM1_HHV6Z

Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus) reference strain

TRM1_HHV7J

Human herpesvirus 7 (strain JI) (HHV-7) (Human T lymphotropic virus) reference strain

TRM1_HHV8P

Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) reference strain

TRM1_MUHVS

Murid herpesvirus 1 (strain Smith) (MuHV-1) (Mouse cytomegalovirus) reference strain

TRM1_PSHV1

Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus) reference strain

TRM1_SHV21

Saimiriine herpesvirus 2 (strain 11) (SaHV-2) (Herpesvirus saimiri) reference strain

TRM1_VZVD

Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3) reference strain

TRM1_BHV2B

Bovine herpesvirus 2 (strain BMV) (BoHV-2) (Bovine mammillitis virus)

TRM1_EHV1

Equine herpesvirus 1 (strain HVS25A) (EHV-1) (Equine abortion virus)

TRM1_EHV1V

Equine herpesvirus 1 (strain V592) (EHV-1) (Equine abortion virus)

TRM1_ELHVK

Elephantid herpesvirus 1 (isolate Asian elephant/Berlin/Kiba/1998) (EIHV-1) (Elephant endotheliotropic herpesvirus)

TRM1_HHV1A

Human herpesvirus 1 (strain Angelotti) (HHV-1) (Human herpes simplex virus 1)

TRM1_HHV1F

Human herpesvirus 1 (strain F) (HHV-1) (Human herpes simplex virus 1)

TRM1_SUHVF

Suid herpesvirus 1 (strain Indiana-Funkhauser / Becker) (SuHV-1) (Pseudorabies virus (strain Indiana-Funkhauser / Becker))

TRM1_TUHV2

Tupaiid herpesvirus (strain 2) (TuHV-2) (Herpesvirus tupaia (strain 2))

13 entries

Tripartite terminase subunit 2

TRM2_ALHV1

Alcelaphine herpesvirus 1 (strain C500) (AlHV-1) (Malignant catarrhal fever virus) reference strain

TRM2_EHV1B

Equine herpesvirus 1 (strain Ab4p) (EHV-1) (Equine abortion virus) reference strain

TRM2_EHV2

Equine herpesvirus 2 (strain 86/87) (EHV-2) reference strain

TRM2_GAHVM

Gallid herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) (GaHV-2) (Marek's disease herpesvirus type 1) reference strain

TRM2_HCMVA

Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5) reference strain

TRM2_HCMVM

Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5) reference strain

TRM2_HHV11

Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain

6M5R; 6M5S; 6M5U; 6M5V

TRM2_HHV2H

Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain

TRM2_HHV6U

Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus) reference strain

TRM2_HHV6Z

Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus) reference strain

TRM2_HHV8P

Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) reference strain

TRM2_PSHV1

Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus) reference strain

TRM2_VZVD

Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3) reference strain

20 entries

Tripartite terminase subunit 3 (EC 3.1.-.-) (Terminase large subunit)

TRM3_ALHV1

Alcelaphine herpesvirus 1 (strain C500) (AlHV-1) (Malignant catarrhal fever virus) reference strain

TRM3_EBVA8

Epstein-Barr virus (strain AG876) (HHV-4) (Human herpesvirus 4) reference strain

TRM3_EBVB9

Epstein-Barr virus (strain B95-8) (HHV-4) (Human herpesvirus 4) reference strain

TRM3_EHV1B

Equine herpesvirus 1 (strain Ab4p) (EHV-1) (Equine abortion virus) reference strain

TRM3_EHV2

Equine herpesvirus 2 (strain 86/87) (EHV-2) reference strain

TRM3_GAHVM

Gallid herpesvirus 2 (strain Chicken/Md5/ATCC VR-987) (GaHV-2) (Marek's disease herpesvirus type 1) reference strain

TRM3_HCMVA

Human cytomegalovirus (strain AD169) (HHV-5) (Human herpesvirus 5) reference strain

3N4P; 3N4Q; 6EY7

TRM3_HCMVM

Human cytomegalovirus (strain Merlin) (HHV-5) (Human herpesvirus 5) reference strain

TRM3_HHV11

Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) reference strain

4IOX; 5HUW; 6M5R; 6M5S; 6M5T; 6M5U; 6M5V

TRM3_HHV2H

Human herpesvirus 2 (strain HG52) (HHV-2) (Human herpes simplex virus 2) reference strain

TRM3_HHV6U

Human herpesvirus 6A (strain Uganda-1102) (HHV-6 variant A) (Human B lymphotropic virus) reference strain

TRM3_HHV6Z

Human herpesvirus 6B (strain Z29) (HHV-6 variant B) (Human B lymphotropic virus) reference strain

TRM3_HHV7J

Human herpesvirus 7 (strain JI) (HHV-7) (Human T lymphotropic virus) reference strain

TRM3_HHV8P

Human herpesvirus 8 type P (isolate GK18) (HHV-8) (Kaposi's sarcoma-associated herpesvirus) reference strain

TRM3_PSHV1

Psittacid herpesvirus 1 (isolate Amazon parrot/-/97-0001/1997) (PsHV-1) (Pacheco's disease virus) reference strain

TRM3_SHV21

Saimiriine herpesvirus 2 (strain 11) (SaHV-2) (Herpesvirus saimiri) reference strain

TRM3_VZVD

Varicella-zoster virus (strain Dumas) (HHV-3) (Human herpesvirus 3) reference strain

TRM3_EBVG

Epstein-Barr virus (strain GD1) (HHV-4) (Human gammaherpesvirus 4)

TRM3_EHV1V

Equine herpesvirus 1 (strain V592) (EHV-1) (Equine abortion virus)

TRM3_ELHVK

Elephantid herpesvirus 1 (isolate Asian elephant/Berlin/Kiba/1998) (EIHV-1) (Elephant endotheliotropic herpesvirus)

1 entry

DNA maturase A (DNA-packaging protein A) (GP18)

1 entry

Putative ubiquitin thioesterase L96 (EC 3.4.19.12)

2 entries

Probable terminase, endonuclease subunit (ORF19)

VPM_BPHC1

Haemophilus phage HP1 (strain HP1c1) (Bacteriophage HP1) reference strain

VPM_BPP2

Escherichia phage P2 (Bacteriophage P2) reference strain

Terminase, endonuclease subunit (GpM)

2 entries

Probable terminase, ATPase subunit (ORF16)

VPP_BPHC1

Haemophilus phage HP1 (strain HP1c1) (Bacteriophage HP1) reference strain

VPP_BPP2

Escherichia phage P2 (Bacteriophage P2) reference strain

Terminase, ATPase subunit (GpP)

1 entry

Viral genome packaging (kw:KW-0231)

Matching UniProtKB/Swiss-Prot entries

Pre-hexon-linking protein IIIa (Capsid vertex-specific component IIIa) (CVSC) (Protein IIIa) (pIIIa)

Capsid vertex component 1

Capsid vertex component 2

DNA N-6-adenine-methyltransferase (DAM) (EC 2.1.1.72) (EcoP1I DNA MTase) (M.EcoP1I) (Type II methyltransferase M.EphP1ORF2P) (M.EphP1ORF2P)

DNA-packaging protein FI

DNA-binding protein J (J protein) (Small core protein)

Initiator protein NS1 (NS1) (EC 3.1.21.-) (EC 3.6.4.12) (NCVP1) (Non-capsid protein NS-1) (Non-structural protein 1) (Non-structural protein NS1)

Packaging enzyme P4 (EC 3.6.1.15)

Assembly protein P7

Putative packaging signal terminase (PAC site terminase)

Packaging protein 1 (Packaging protein IVa2)

DNA packaging protein (ATPase gp16) (EC 3.6.4.-) (Gene product 16) (gp16) (Protein p16)

Packaging protein 2 (Packaging protein 22K) (L4-22K)

Packaging protein P20

Packaging protein P22 (GpK) (Protein K)

Packaging protein 3 (L1-52/55 kDa protein) (Packaging protein 52K)

Packaging efficiency factor P6

DNA packaging ATPase P9 (Protein P9)

Portal protein

Protein 33K (L4-33K) (Splicing factor 33K) (Terminase, small subunit)

Terminase large subunit (DNA-packaging protein) (Gene product 2) (gp2)

Primer terminal protein (TP) (DNA terminal protein) (Gene product 3) (gp3) (Protein p3) (Terminal protein)

Terminase small subunit (Gene product 1) (gp1)

Tripartite terminase subunit 1

Tripartite terminase subunit 2

Tripartite terminase subunit 3 (EC 3.1.-.-) (Terminase large subunit)

DNA maturase A (DNA-packaging protein A) (GP18)

Putative ubiquitin thioesterase L96 (EC 3.4.19.12)

Probable terminase, endonuclease subunit (ORF19)

Probable terminase, ATPase subunit (ORF16)

Probable DNA-packaging protein (Terminase)