Lymphocystivirus (taxid:10494)

VIRION

image

Polyhedral virions 120-350 nm in diameter. The capsid displays an icosahedral symmetry T=189-217, with an internal lipid membrane. Virions are either externally enveloped or not depending whether they budded from the cell membrane, or were arranged in paracrystaline array in the host cell cytoplasm and were released by lysis.

  • Hexons: Double jelly roll-fold major capsid protein [A0A6B9XL71]
  • Pentons: Single jelly roll-fold [?]

GENOME

Linear, dsDNA genome of about 100 kb. The genome contains terminal and redundant sequences and is circularly permuted.
Approximately 25% of the cytosine residues of the genome are methylated by a virus encoded DNA methyltransferase.

GENE EXPRESSION

ENZYMES

REPLICATION

NUCLEO-CYTOPLASMIC

  1. Attachement of the viral proteins to host receptors mediates endocytosis of the virus into the host cell.
  2. Fusion with the plasma membrane to release the DNA core into the host cytoplasm.
  3. Viral DNA is transported to the cell nucleus where host macromolecular synthesis is rapidly shutdown. Transcription is initiated by virally modified host RNA polymerase II.
  4. Parental DNA is used to produce genome and greater than genome length DNA.
  5. Progeny DNA is transported into cytoplasmic viral factories where large concatamers of viral DNA are formed by recombination. Transcription of very late transcripts may also take place in the cytoplasm.
  6. Assembly of new virions in the cytoplasm.
  7. Virions exit the cell by budding or cell lysis.

Matching UniProtKB/Swiss-Prot entries

(all links/actions below point to uniprot.org website)

1 entry grouped by protein

1 entry

Major capsid protein (MCP) (P50)

MCP_LCDV1
Lymphocystis disease virus 1 (isolate Darai) (LCDV-1) reference strain
These structures were created with the help of Colabfold by Jason Nomburg, Nathan Price and Jennifer Doudna (ModelArchive).

Lymphocystis disease virus Sa taxid:1898060

Protein ModelArchive
3-beta hydroxysteroid dehydrogenase/isomerase family ma-jd-viral-10518
7 transmembrane receptor ma-jd-viral-18397
AAA+ ATPase predicted domain ma-jd-viral-54632
ATPase ma-jd-viral-17619
Acetyl-coA hydrolase ma-jd-viral-65073
Antimutator GTP pyrophosphohydrolase MutT protein ma-jd-viral-08010
Bcl-2 Bcl-2 homology region 1-3 domain-containing protein ma-jd-viral-57168
Bcl-2 like protein ma-jd-viral-15596
Bcl-2 like protein ma-jd-viral-15597
C2H2-type domain-containing protein ma-jd-viral-49214
CARD domain-containing protein ma-jd-viral-06134
CARD domain-containing protein ma-jd-viral-52870
Catalytic domain of ctd-like phosphatases ma-jd-viral-06264
Collagen triple helix repeat ma-jd-viral-66467
DNA methyltransferase ma-jd-viral-31909
DNA-directed DNA polymerase (EC 2.7.7.7) ma-jd-viral-17305
DNA-directed RNA polymerase subunit (EC 2.7.7.6) ma-jd-viral-39187
DNA-directed RNA polymerase subunit beta (EC 2.7.7.6) ma-jd-viral-45110
Deoxynucleoside kinases ma-jd-viral-25165
Early iridovirus protein ma-jd-viral-12911
Early transcription factor large subunit-like protein ma-jd-viral-42554
F-box domain-containing protein ma-jd-viral-10012
F-box domain-containing protein ma-jd-viral-41682
F-box domain-containing protein ma-jd-viral-41683
F-box domain-containing protein ma-jd-viral-36044
Fibronectin type-III domain-containing protein ma-jd-viral-62132
G-protein coupled receptors family 1 profile domain-containing protein ma-jd-viral-12614
Galactose-binding lectin protein ma-jd-viral-38011
Galectin domain-containing protein ma-jd-viral-49512
Immediate early protein ICP-46 ma-jd-viral-14196
Insuline-like growth factor family member ma-jd-viral-47572
Lipopolysaccharide-modifying enzyme protein ma-jd-viral-12363
MYM-type domain-containing protein ma-jd-viral-53818
Major capsid protein ma-jd-viral-18004
Major outer envelope glycoprotein-like protein ma-jd-viral-24488
Membrane-bound metallopeptidase ma-jd-viral-37027
Myristylated membrane protein ma-jd-viral-47915
Myristylated membrane protein ma-jd-viral-56646
Neurofilament triplet H1-like protein ma-jd-viral-35042
Nucleotide-diphospho-sugar transferase domain-containing protein ma-jd-viral-30323
Ovule protein ma-jd-viral-34176
Papain family cysteine protease ma-jd-viral-41150
Proliferating cell nuclear antigen ma-jd-viral-21546
Protein kinase domain-containing protein ma-jd-viral-24490
Protein kinase domain-containing protein ma-jd-viral-24690
RING-type domain-containing protein ma-jd-viral-34331
RING-type domain-containing protein ma-jd-viral-41986
RNA ligase ma-jd-viral-29741
RNA-dependent DNA polymerase ma-jd-viral-19202
RNase III protein ma-jd-viral-20004
Ribonucleotide reductase large subunit ma-jd-viral-14304
SAP domain-containing protein ma-jd-viral-34289
SWI/SNF2 family helicase protein ma-jd-viral-23189
Serine-threonine protein kinase ma-jd-viral-24688
Serine-threonine protein kinase ma-jd-viral-24699
Serine-threonine protein kinase, PKc-like superfamily ma-jd-viral-24697
Serine/threonine protein kinase ma-jd-viral-24692
Serpin-like protein ma-jd-viral-02301
Site-specific recombinase XerD ma-jd-viral-40714
Sulfhydryl oxidase (EC 1.8.3.2) ma-jd-viral-22266
Sulfotransferase domain-containing protein ma-jd-viral-35108
TRASH domain-containing protein ma-jd-viral-49734
Thioredoxin domain-containing protein ma-jd-viral-24184
Transcription elongation factor S II ma-jd-viral-01898
Transcription factor CBF/NF-Y/archaeal histone domain-containing protein ma-jd-viral-15000
Tristetraprolin-like zinc finger protein ma-jd-viral-34594
Tumor necrosis factor receptor ma-jd-viral-01262
Tumor necrosis factor receptor protein ma-jd-viral-01260
Tumor necrosis factor receptor-like protein ma-jd-viral-66991
Uncharacterized protein ma-jd-viral-00169
Uncharacterized protein ma-jd-viral-00372
Uncharacterized protein ma-jd-viral-01555
Uncharacterized protein ma-jd-viral-07206
Uncharacterized protein ma-jd-viral-08326
Uncharacterized protein ma-jd-viral-10459
Uncharacterized protein ma-jd-viral-16306
Uncharacterized protein ma-jd-viral-32279
Uncharacterized protein ma-jd-viral-32750
Uncharacterized protein ma-jd-viral-29422
Uncharacterized protein ma-jd-viral-31783
Uncharacterized protein ma-jd-viral-32977
Uncharacterized protein ma-jd-viral-30147
Uncharacterized protein ma-jd-viral-32214
Uncharacterized protein ma-jd-viral-30297
Uncharacterized protein ma-jd-viral-30322
Uncharacterized protein ma-jd-viral-22953
Uncharacterized protein ma-jd-viral-23181
Uncharacterized protein ma-jd-viral-23182
Uncharacterized protein ma-jd-viral-23183
Uncharacterized protein ma-jd-viral-46385
Uncharacterized protein ma-jd-viral-52887
Uncharacterized protein ma-jd-viral-46406
Uncharacterized protein ma-jd-viral-47756
Uncharacterized protein ma-jd-viral-47923
Uncharacterized protein ma-jd-viral-53209
Uncharacterized protein ma-jd-viral-48270
Uncharacterized protein ma-jd-viral-50519
Uncharacterized protein ma-jd-viral-50584
Uncharacterized protein ma-jd-viral-53584
Uncharacterized protein ma-jd-viral-45632
Uncharacterized protein ma-jd-viral-45780
Uncharacterized protein ma-jd-viral-45782
Uncharacterized protein ma-jd-viral-52385
Uncharacterized protein ma-jd-viral-47155
Uncharacterized protein ma-jd-viral-46116
Uncharacterized protein ma-jd-viral-52677
Uncharacterized protein ma-jd-viral-52783
Uncharacterized protein ma-jd-viral-39444
Uncharacterized protein ma-jd-viral-37257
Uncharacterized protein ma-jd-viral-37274
Uncharacterized protein ma-jd-viral-41998
Uncharacterized protein ma-jd-viral-41999
Uncharacterized protein ma-jd-viral-39697
Uncharacterized protein ma-jd-viral-39700
Uncharacterized protein ma-jd-viral-44537
Uncharacterized protein ma-jd-viral-37710
Uncharacterized protein ma-jd-viral-40016
Uncharacterized protein ma-jd-viral-37781
Uncharacterized protein ma-jd-viral-40344
Uncharacterized protein ma-jd-viral-42812
Uncharacterized protein ma-jd-viral-35910
Uncharacterized protein ma-jd-viral-35971
Uncharacterized protein ma-jd-viral-43269
Uncharacterized protein ma-jd-viral-38687
Uncharacterized protein ma-jd-viral-38690
Uncharacterized protein ma-jd-viral-38803
Uncharacterized protein ma-jd-viral-36430
Uncharacterized protein ma-jd-viral-43711
Uncharacterized protein ma-jd-viral-64600
Uncharacterized protein ma-jd-viral-66407
Uncharacterized protein ma-jd-viral-66615
Uncharacterized protein ma-jd-viral-63592
Uncharacterized protein ma-jd-viral-66958
Uncharacterized protein ma-jd-viral-67007
Uncharacterized protein ma-jd-viral-64833
Uncharacterized protein ma-jd-viral-64912
Uncharacterized protein ma-jd-viral-67130
Uncharacterized protein ma-jd-viral-65455
Uncharacterized protein ma-jd-viral-57471
Uncharacterized protein ma-jd-viral-57605
Uncharacterized protein ma-jd-viral-57649
Uncharacterized protein ma-jd-viral-62552
Uncharacterized protein ma-jd-viral-57775
Uncharacterized protein ma-jd-viral-60235
Uncharacterized protein ma-jd-viral-62924
Uncharacterized protein ma-jd-viral-62955
Uncharacterized protein ma-jd-viral-56030
Uncharacterized protein ma-jd-viral-60847
Uncharacterized protein ma-jd-viral-60852
Uncharacterized protein ma-jd-viral-61291
Uncharacterized protein ma-jd-viral-61576
Uncharacterized protein ma-jd-viral-61577
Uncharacterized protein ma-jd-viral-61845
Uncharacterized protein ma-jd-viral-54955
Uncharacterized protein ma-jd-viral-55105
Uncharacterized protein ma-jd-viral-57394
Uncharacterized protein ma-jd-viral-59657
Uvr/REP helicase ma-jd-viral-06121
Virion assembly protein, NTPase ma-jd-viral-10615
XPG/RAD2-type nuclease ma-jd-viral-22490
Zinc finger protein ma-jd-viral-49215
ribonucleoside-diphosphate reductase (EC 1.17.4.1) ma-jd-viral-05418
thymidylate synthase (EC 2.1.1.45) ma-jd-viral-08316