Gemycircularvirus (taxid:1542744)
VIRION
Non-enveloped, round, T=1 icosahedral symmetry, about 20 nm in diameter.
GENOME
Monopartite, circular, ssDNA genome genome of about 2.17 kb. There are coding regions in both the virion (positive) and complementary (negative) sense strands.
The replication (Rep) protein initiates and terminates rolling circle replication. Two intergenic regions separate the two ORFs, the large intergenic region (LIR, 133 nt)
and the small intergenic region (SIR, 119 nt). There is a potential stem-loop structure in the LIR that includes a nona-nucleotide sequence (TAATATTAT) where ssDNA replication is initiated.
The short intergenic region contains bidirectional polyadenylation signals.
GENE EXPRESSION
Transcription is bidirectional from the long intergenic region (LIR) which contains two divergent promoters. The resulting transcripts encode a capsid protein and a replication-associated protein.
ENZYMES
REPLICATION
- Virus attaches to host cell, and genomic DNA penetrates into the cytoplasm.
- Presumably the ssDNA is converted to dsDNA.
- Transcription of viral genes, possibly by a host RNA polymerase.
- Genome replication, possibly by rolling circle
- Assembly and release of virions.
Cassava associated gemycircularvirus 1 taxid:1985374
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28711 |
| Replication-associated protein | ma-jd-viral-17049 |
Common bean-associated gemycircularvirus taxid:1897538
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28682 |
| RepA | ma-jd-viral-17005 |
| Replication-associated protein | ma-jd-viral-20218 |
Dragonfly-associated circular virus 2 taxid:1234886
Faeces associated gemycircularvirus 16 taxid:1843736
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28729 |
| RepA | ma-jd-viral-17024 |
| Replication-associated protein | ma-jd-viral-20247 |
Faeces associated gemycircularvirus 17 taxid:1843737
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28725 |
| RepA | ma-jd-viral-55596 |
| Replication-associated protein | ma-jd-viral-55597 |
Faeces associated gemycircularvirus 18 taxid:1843738
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28684 |
| RepA | ma-jd-viral-17027 |
| Replication-associated protein | ma-jd-viral-20527 |
Faeces associated gemycircularvirus 19 taxid:1843739
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28712 |
| RepA | ma-jd-viral-17046 |
| Replication-associated protein | ma-jd-viral-20629 |
Faeces associated gemycircularvirus 2 taxid:1391031
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28683 |
| Replication associated protein | ma-jd-viral-20287 |
Faeces associated gemycircularvirus 20 taxid:1843740
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28671 |
| RepA | ma-jd-viral-16993 |
| Replication-associated protein | ma-jd-viral-20353 |
Faeces associated gemycircularvirus 21 taxid:1843741
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28718 |
| RepA | ma-jd-viral-20174 |
| Replication-associated protein | ma-jd-viral-20352 |
Faeces associated gemycircularvirus 22 taxid:1843742
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28692 |
| RepA | ma-jd-viral-17022 |
| Replication associated protein | ma-jd-viral-17013 |
Faeces associated gemycircularvirus 4 taxid:1391033
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28677 |
| Replication-associated protein | ma-jd-viral-20559 |
Faeces associated gemycircularvirus 5 taxid:1391034
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28706 |
| Replication-associated protein | ma-jd-viral-20545 |
Faeces associated gemycircularvirus 6 taxid:1391035
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28737 |
| Replication-associated protein | ma-jd-viral-20476 |
Faeces associated gemycircularvirus 7 taxid:1391036
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28736 |
| Replication associated protein | ma-jd-viral-20235 |
Gemycircularvirus HV-GcV1 taxid:1862824
Gemycircularvirus gemy-ch-rat1 taxid:1708653
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28663 |
| Minor capsid protein | ma-jd-viral-31882 |
| Replication-associated protein | ma-jd-viral-20241 |
Gerygone associated gemycircularvirus 3 taxid:1985383
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28694 |
| Replication associated protein | ma-jd-viral-20446 |
Mongoose feces-associated gemycircularvirus d taxid:1634487
| Protein | ModelArchive |
| Capsid | ma-jd-viral-28707 |
| Replication-associated protein | ma-jd-viral-20455 |
Poecile atricapillus GI tract-associated gemycircularvirus taxid:1699094
| Protein | ModelArchive |
| Putative capsid protein | ma-jd-viral-28685 |
| Putative replication-associated protein | ma-jd-viral-17006 |
Sclerotinia sclerotiorum hypovirulence associated DNA virus 1 taxid:664785
| Protein | ModelArchive |
| Coat protein | ma-jd-viral-28669 |
| Replication-associated protein | ma-jd-viral-20285 |
Thrips-associated genomovirus 1 taxid:1941233
| Protein | ModelArchive |
| Capsid protein | ma-jd-viral-28734 |
| RepA | ma-jd-viral-17010 |
| Replication-associated protein | ma-jd-viral-20372 |