RNA editing (kw:KW-0691)
Editing the genomic template would be disastrous because the change is irreversible. Therefore, this only occurs during transcription in negative-stranded RNA viruses; no editing occurs during replication.
co-transcriptional editing, Negative stranded RNA virus
Genus | Virus | Major insertions | Protein | % | Upstream sequence | Position | Reference |
Respirovirus | BPIV3 | 1 to 6 Gs | P / V / D | 33-33-33 | AGGGAAUUAAAAAAGGG | 707-723 | ![]() |
Respirovirus | hPIV3 | 1 to 6 Gs | P / V / D | 33-33-33 | AAAGAAUUAAAAAAGGG | 707-723 | ![]() |
Henipavirus | Nipah virus | 1 G | P / V / W | 50-25-25 | AGGGAAUUAAAAAAGGG | 707-723 | ![]() |
Respirovirus | Sendai virus | 1 G | P / V / W | 70-25-5 | GACUCAACAAAAAAGGG | 934-950 | ![]() |
Morbilivirus | Measles virus | 1 G | P / V / W | 60-35-5 | ACACCCAUUAAAAAGGG | 676-692 | ![]() |
Morbilivirus | Phocine distemper virus | 1 G | P / V / W | - | GAACCCAUUAAAAAGGG | 676-692 | ![]() |
Morbilivirus | Rinderpest virus | 1 G | P / V / W | - | AAACCCAUUAAAAAGGG | 676-692 | ![]() |
Morbilivirus | Canine distemper virus | 1 G | P / V / W | - | GGAUCCAUUAAAAAGGG | 675-691 | ![]() |
Morbilivirus | Dolphin morbillivirus | 1 G | P / V / W | - | AAAUCCAUUAAAAAGGG | 676-692 | ![]() |
Rubulavirus | Simian virus 5 | 2 G | V / P | - | CAUCGAUUUUAAGAGGG | 474-490 | ![]() |
Rubulavirus | Mumps virus | 2 G | V / P | - | AACAGAAUUUAAGAGGG | 447-463 | ![]() |
Rubulavirus | Parainfluenza virus type 4 | 2 G | V / P | - | CAGGAUAUUUAAGAGGG | 441-457 | - |
Rubulavirus | La piedad, Michoacan virus | 2 G | V / P | - | AGCAGUUUUAAAAAGGG | 486-502 | ![]() |
Rubulavirus | Parainfluenza virus type 2 | 2 G | V / P | - | CCCCAACUUUAAGAGGG | 470-486 | ![]() |
Ebolavirus | Ebolavirus | 1 A | sGP / GP / ssGP | - | GACCCUUUGAUUUUUUU | 870-886 | ![]() |
co-transcriptional editing, Positive stranded RNA virus
Genus | Virus | Major insertions | Protein | % | Upstream sequence | Position | Reference |
Potyvirus | Turnip mosaic virus | 1 A | P3 / P3N-PIPO | 98-2 | CUCCAUUUUGGAAAAAA | 2954 | ![]() |
Potyvirus | Plum Pox Virus | 1 A | P3 / P3N-PIPO | 98.4-1.6 | ......GUGGAAAAAA | 2913 | ![]() |
Potyvirus | Sweet potato feathery mottle virus | 1 A | P1 / P1N-PISPO | 88.2/11.8 | .......AUGGAAAAAA | 1389 | ![]() |
Potyvirus | Sweet potato feathery mottle virus | +1 A or -1 A | P3 / P3N-PIPO | 98.2/1.2 or 0.6 | UGAGCUUAUGGAAAAAA | 3955 | ![]() |
Bernardo Rodamilans, Adrian Valli, Ares Mingot, David San Leon, David Baulcombe, Juan J. Lopez-Moya, Juan A. Garcia
J. Virol. July 2015; 89: 6965?6967
Matching UniProtKB/Swiss-Prot entries
(all links/actions below point to uniprot.org website)140 entries grouped by strain
3 entries
Hendra virus (isolate Horse/Autralia/Hendra/1994) reference strain
3 entries
Newcastle disease virus (strain Chicken/United States/B1/48) (NDV) reference strain
1 entry
Sendai virus (strain Ohita) (SeV) reference strain
3 entries
Zaire ebolavirus (strain Mayinga-76) (ZEBOV) (Zaire Ebola virus) reference strain
2 entries
Hepatitis delta virus genotype I (isolate D380) (HDV) reference strain
2 entries
Human parainfluenza 2 virus (strain Toshiba) (HPIV-2) reference strain
2 entries
Measles virus (strain Ichinose-B95a) (MeV) (Subacute sclerose panencephalitis virus) reference strain
2 entries
Mumps virus genotype B (strain Miyahara vaccine) (MuV) reference strain
2 entries
Parainfluenza virus 5 (strain W3) (PIV5) (Simian virus 5) reference strain
1 entry
Rinderpest virus (strain RBOK) (RDV) reference strain
1 entry
Simian virus 41 (SV41) reference strain
2 entries
Tupaia paramyxovirus (TPMV) reference strain
1 entry
Peste-des-petits-ruminants virus (PPRV) reference strain
3 entries
Mumps virus genotype A (strain Jeryl-Lynn) (MuV)
3 entries
Mumps virus genotype N (strain L-Zagreb vaccine) (MuV)
3 entries
Nipah virus
3 entries
Reston ebolavirus (strain Philippines-96) (REBOV) (Reston Ebola virus)
3 entries
Reston ebolavirus (strain Reston-89) (REBOV) (Reston Ebola virus)
3 entries
Sendai virus (strain Fushimi) (SeV)
3 entries
Sendai virus (strain Hamamatsu) (SeV)
3 entries
Sendai virus (strain Harris) (SeV)
2 entries
Sendai virus (strain Ohita) (SeV)
3 entries
Sendai virus (strain Z) (SeV) (Sendai virus (strain HVJ))
3 entries
Sudan ebolavirus (strain Human/Uganda/Gulu/2000) (SEBOV) (Sudan Ebola virus)
3 entries
Zaire ebolavirus (strain Kikwit-95) (ZEBOV) (Zaire Ebola virus)
2 entries
Hepatitis delta virus genotype I (isolate American) (HDV)
2 entries
Hepatitis delta virus genotype I (isolate Italian) (HDV)
2 entries
Hepatitis delta virus genotype I (isolate Japanese M-1) (HDV)
2 entries
Hepatitis delta virus genotype I (isolate Japanese M-2) (HDV)
2 entries
Hepatitis delta virus genotype I (isolate Japanese S-2) (HDV)
2 entries
Hepatitis delta virus genotype I (isolate Lebanon-1) (HDV)
2 entries
Hepatitis delta virus genotype I (isolate Nauru) (HDV)
2 entries
Hepatitis delta virus genotype I (isolate US-2) (HDV)
2 entries
Hepatitis delta virus genotype I (isolate Woodchuck) (HDV)
2 entries
Hepatitis delta virus genotype II (isolate 7/18/83) (HDV)
2 entries
Hepatitis delta virus genotype II (isolate Japanese S-1) (HDV)
2 entries
Hepatitis delta virus genotype II (isolate TW2476) (HDV)
2 entries
Hepatitis delta virus genotype III (isolate Peru-1) (HDV)
2 entries
Hepatitis delta virus genotype III (isolate VnzD8349) (HDV)
2 entries
Hepatitis delta virus genotype III (isolate VnzD8375) (HDV)
2 entries
Hepatitis delta virus genotype III (isolate VnzD8624) (HDV)
2 entries
Human parainfluenza 2 virus (HPIV-2)
2 entries
Human parainfluenza 4a virus (strain Toshiba) (HPIV-4a)
2 entries
Human parainfluenza 4b virus (strain 68-333) (HPIV-4b)
2 entries
Measles virus (strain Edmonston) (MeV) (Subacute sclerose panencephalitis virus)
2 entries
Measles virus (strain Edmonston-AIK-C vaccine) (MeV) (Subacute sclerose panencephalitis virus)
2 entries
Measles virus (strain IP-3-Ca) (MeV) (Subacute sclerose panencephalitis virus)
2 entries
Measles virus (strain Yamagata-1) (MeV) (Subacute sclerose panencephalitis virus)
2 entries
Mumps virus (strain Enders) (MuV)
2 entries
Mumps virus (strain SBL) (MuV)
2 entries
Mumps virus (strain SBL-1) (MuV)
2 entries
Newcastle disease virus (strain Ulster/2C) (NDV)
2 entries
Phocine distemper virus (PDV)
2 entries
Reston ebolavirus (strain Siena/Philippine-92) (REBOV) (Reston Ebola virus)
2 entries
Rinderpest virus (strain Kabete O) (RDV)
1 entry
Rinderpest virus (strain RBOK) (RDV)
1 entry
Simian virus 41 (SV41)
2 entries
Sudan ebolavirus (strain Boniface-76) (SEBOV) (Sudan Ebola virus)
2 entries
Sudan ebolavirus (strain Maleo-79) (SEBOV) (Sudan Ebola virus)
2 entries
Tai Forest ebolavirus (strain Cote d'Ivoire-94) (TAFV) (Cote d'Ivoire Ebola virus)
2 entries
Zaire ebolavirus (strain Eckron-76) (ZEBOV) (Zaire Ebola virus)
2 entries
Zaire ebolavirus (strain Gabon-94) (ZEBOV) (Zaire Ebola virus)
1 entry
Bovine parainfluenza 3 virus (BPIV-3)
1 entry
Canine distemper virus (strain Onderstepoort) (CDV)
1 entry
Human parainfluenza 3 virus (strain Wash/47885/57) (HPIV-3) (Human parainfluenza 3 virus (strain NIH 47885))
1 entry
Measles virus (strain Edmonston B) (MeV) (Subacute sclerose panencephalitis virus)
1 entry
Measles virus (strain Edmonston-Moraten vaccine) (MeV) (Subacute sclerose panencephalitis virus)
1 entry
Measles virus (strain Edmonston-Schwarz vaccine) (MeV) (Subacute sclerose panencephalitis virus)
1 entry
Mumps orthorubulavirus (MuV)
1 entry