Comovirinae (taxid:675075)
VIRION

Non-enveloped, 28-30 nm in diameter, pseudo T=3 icosahedral capsid. Genome segments are encapsidated separately into two different types of particle similar in size.
GENOME
Segmented, bipartite linear ssRNA(+) genome composed of RNA-1=6-8 kb and RNA-2=4-7 kb. Each genomic segment has a VPg linked to its 5'end and a 3' poly(A) tract.
GENE EXPRESSION
The virion RNA is infectious and serves as both the genome and mRNA.
RNA-1 and RNA-2 are translated into two polyproteins, which are then processed into functional proteins. RNA-1 encodes proteins necessary for replication, while RNA-2 encodes one or two capsid proteins and product(s) involved in cell-to-cell movement.
ENZYMES
- RNA-dependent RNA polymerase [RdRp]
- VPG-type capping [VPg]
- NTPase-helicase [Hel]
- Polyprotein major protease (Peptidase C3) [Pro]
REPLICATION
CYTOPLASMIC
- Virus penetrates into the cell.
- Uncoating, and release of the viral genomic RNA into the cytoplasm.
- Synthesis and proteolytic cleavage of the replicase polyprotein RNA-1.
- Replication occurs in viral factories made of membrane vesicles derived from the ER. A dsRNA genome is synthesized from the genomic ssRNA(+).
- The dsRNA genome is transcribed/replicated thereby providing viral mRNAs/new ssRNA(+) genomes.
- Assembly of new virus particles.
- Movement protein allows cell-to-cell movement.
Matching UniProtKB/Swiss-Prot entries
(all links/actions below point to uniprot.org website)43 entries grouped by protein
1 entry
Capsid protein (Coat protein)
16 entries
RNA1 polyprotein (P1)
20 entries
RNA2 polyprotein (P2)
1 entry
Protein P3
3 entries
Satellite RNA 48 kDa protein
1 entry
Uncharacterized protein in RNA2
1 entry
Uncharacterized protein in RNA2
Bean rugose mosaic virus taxid:128790
Protein | ModelArchive |
RNA2 polyprotein (Genome polyprotein M) (M RNA polyprotein) (Middle component RNA polyprotein)... | ma-jd-viral-08198 |
Petunia chlorotic mottle virus taxid:1935922
Protein | ModelArchive |
Polyprotein | ma-jd-viral-08197 |
Potato black ringspot virus taxid:257464
Protein | ModelArchive |
RNA 2 polyprotein | ma-jd-viral-08194 |
Soybean latent spherical virus taxid:1927714
Protein | ModelArchive |
Polyprotein | ma-jd-viral-08193 |