Betacoronavirus

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VIRION

Enveloped, spherical, about 120 nm in diameter. The RNA genome is associated with the N protein to form the nucleocapsid. see Neuman BW et al. for virion cryo-electron microscopy analysis.

GENOME

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Monopartite, linear ssRNA(+) genome of 27-32kb in size (the largest of all RNA virus genomes). Capped, and polyadenylated. The leader RNA (65-89 bp) at the 5' end of the genome is also present at the end of each subgenomic RNAs.

GENE EXPRESSION

The virion RNA is infectious and serves as both the genome and viral messenger RNA. Genomic RNA encodes ORF1a, as for ORF1b, it is translated by ribosomal frameshifting. Resulting polyproteins pp1a and pp1ab are processed into the viral polymerase (RdRp) and other non-structural proteins involved in RNA synthesis. Structural proteins are expressed as subgenomic RNAs.

REPLICATION

CYTOPLASMIC

  1. Attachement of the viral S protein (maybe also HE if present) to host receptors mediates endocytosis of the virus into the host cell.
  2. Fusion of virus membrane with the endosomal membrane (probably mediated by S2), ssRNA(+) genome is released into the cytoplasm.
  3. Synthesis and proteolytic cleavage of the replicase polyprotein.
  4. Replication occurs in viral factories. A dsRNA genome is synthesized from the genomic ssRNA(+).
  5. The dsRNA genome is transcribed/replicated thereby providing viral mRNAs/new ssRNA(+) genomes.
  6. Synthesis of structural proteins encoded by subgenomic mRNAs.
  7. Assembly and budding at membranes of the endoplasmic reticulum (ER), the intermediate compartments, and/or the Golgi complex.
  8. Release of new virions by exocytosis.

Host-virus interaction

Host gene expression shutoff

SARS-CoV nsp1 protein mediates host mRNA decay .

Apoptosis modulation

Human coronavirus induces neuronal apoptosis via mitochondrial apoptosis-inducing factor and cyclophilin D .

Cell-cycle modulation

SARS-CoV Nsp15 has a retinoblastoma protein-binding motif (LXCXE/D) and seems to interact with host retinoblastoma protein resulting in an increased proportion of cells in the S phase of the cell cycle. This probably involves G1/S host cell cycle checkpoint dysregulation by the virus .

Murine coronavirus and SARS-CoV may also induce G0/G1 checkpoint dysregulation .

Innate immune response inhibition

SARS-CoV Protein 3a, which has a viral channel activity, may cause endoplasmic reticulum stress and inhibition of the type 1 interferon receptor .

SARS-CoV PL-Pro mediates ISG15 inhibition and inhibition of host IRF3 .

SARS-CoV M protein mediates the inhibition of host TRAF3

Matching UniProtKB/Swiss-Prot entries

316 entries grouped by strain (browse by keywords)

16 entries

Severe acute respiratory syndrome coronavirus 2 (2019-nCoV) (SARS-CoV-2) reference strain

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SPIKE_SARS2 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...

pdb 6LVN; 6LXT; 6LZG; 6M0J; 6M17; 6M1V; 6VSB; 6VW1; 6VXX; 6VYB; 6W41; 6WPS; 6WPT; 6X29; 6X2A; 6X2B; 6X2C; 6X6P; 6X79; 6XC2; 6XC3; 6XC4; 6XC7; 6XCM; 6XCN; 6XDG; 6XE1; 6XEY; 6XF5; 6XF6; 6XKL; 6XKP; 6XKQ; 6XLU; 6XM0; 6XM3; 6XM4; 6XM5; 6XR8; 6XRA; 6XS6; 6YLA; 6YM0; 6YOR; 6YZ5; 6YZ7; 6Z2M; 6Z43; 6Z97; 6ZB4; 6ZB5; 6ZBP; 6ZCZ; 6ZDG; 6ZDH; 6ZER; 6ZFO; 6ZGE; 6ZGG; 6ZGI; 6ZH9; 6ZHD; 6ZLR; 6ZOW; 6ZOX; 6ZOY; 6ZOZ; 6ZP0; 6ZP1; 6ZP2; 6ZP5; 6ZP7; 6ZWV; 6ZXN; 7A25; 7A29; 7A4N; 7A5R; 7A5S; 7A91; 7A92; 7A93; 7A94; 7A95; 7A96; 7A97; 7A98; 7AD1; 7B17; 7BEH; 7BEI; 7BEJ; 7BEK; 7BEL; 7BEM; 7BEN; 7BEO; 7BEP; 7BWJ; 7BYR; 7BZ5; 7C01; 7C2L; 7C8D; 7C8J; 7C8V; 7C8W; 7CAB; 7CAC; 7CAH; 7CAI; 7CAK; 7CAN; 7CDI; 7CDJ; 7CH4; 7CH5; 7CHB; 7CHC; 7CHE; 7CHF; 7CHH; 7CJF; 7CM4; 7CN9; 7CT5; 7CWL; 7CWM; 7CWN; 7CWO; 7CWS; 7CWU; 7D2Z; 7D30; 7DCC; 7DCX; 7DD2; 7DD8; 7DDD; 7DDN; 7DF3; 7DF4; 7DK3; 7DK4; 7DK5; 7DK6; 7DK7; 7DMU; 7DPM; 7JJC; 7JJI; 7JJJ; 7JMO; 7JMP; 7JMW; 7JV2; 7JV4; 7JV6; 7JVA; 7JVB; 7JVC; 7JW0; 7JWB; 7JWY; 7JX3; 7JZL; 7JZM; 7JZN; 7JZU; 7K43; 7K45; 7K4N; 7K8M; 7K8S; 7K8T; 7K8U; 7K8V; 7K8W; 7K8X; 7K8Y; 7K8Z; 7K90; 7K9Z; 7KDG; 7KDH; 7KDI; 7KDJ; 7KDK; 7KDL; 7KE4; 7KE6; 7KE7; 7KE8; 7KE9; 7KEA; 7KEB; 7KEC; 7KGJ; 7KGK; 7KJ2; 7KJ3; 7KJ4; 7KJ5; 7KKK; 7KKL; 7KL9; 7KLG; 7KLH; 7KLW; 7KMB; 7KMG; 7KMH; 7KMI; 7KMK; 7KML; 7KMS; 7KMZ; 7KN5; 7KN6; 7KN7; 7KNB; 7KNE; 7KNH; 7KNI; 7KS9; 7KSG; 7KXJ; 7KXK; 7KZB; 7L02; 7L06; 7L09; 7L0N; 7L2C; 7L3N; 7L5B; 7L7F; 7L7K; 7LCN; 7LD1; 7LOP; 7ND3; 7ND4; 7ND5; 7ND6; 7ND7; 7ND8; 7ND9; 7NDA; 7NDB; 7NDC; 7NDD; 7NEH

NS7B_SARS2 ORF7b protein (ORF7b) (Accessory protein 7b)
R1AB_SARS2 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

pdb 5R7Y; 5R7Z; 5R80; 5R81; 5R82; 5R83; 5R84; 5R8T; 5RE4; 5RE5; 5RE6; 5RE7; 5RE8; 5RE9; 5REA; 5REB; 5REC; 5RED; 5REE; 5REF; 5REG; 5REH; 5REI; 5REJ; 5REK; 5REL; 5REM; 5REN; 5REO; 5REP; 5RER; 5RES; 5RET; 5REU; 5REV; 5REW; 5REX; 5REY; 5REZ; 5RF0; 5RF1; 5RF2; 5RF3; 5RF4; 5RF5; 5RF6; 5RF7; 5RF8; 5RF9; 5RFA; 5RFB; 5RFC; 5RFD; 5RFE; 5RFF; 5RFG; 5RFH; 5RFI; 5RFJ; 5RFK; 5RFL; 5RFM; 5RFN; 5RFO; 5RFP; 5RFQ; 5RFR; 5RFS; 5RFT; 5RFU; 5RFV; 5RFW; 5RFX; 5RFY; 5RFZ; 5RG0; 5RG1; 5RG2; 5RG3; 5RGG; 5RGH; 5RGI; 5RGJ; 5RGK; 5RGL; 5RGM; 5RGN; 5RGO; 5RGP; 5RGQ; 5RGR; 5RGS; 5RGT; 5RGU; 5RGV; 5RGW; 5RGX; 5RGY; 5RGZ; 5RH0; 5RH1; 5RH2; 5RH3; 5RH4; 5RH5; 5RH6; 5RH7; 5RH8; 5RH9; 5RHA; 5RHB; 5RHC; 5RHD; 5RHE; 5RHF; 5RL0; 5RL1; 5RL2; 5RL3; 5RL4; 5RL5; 5RL6; 5RL7; 5RL8; 5RL9; 5RLB; 5RLC; 5RLD; 5RLE; 5RLF; 5RLG; 5RLH; 5RLI; 5RLJ; 5RLK; 5RLL; 5RLM; 5RLN; 5RLO; 5RLP; 5RLQ; 5RLR; 5RLS; 5RLT; 5RLU; 5RLV; 5RLW; 5RLY; 5RLZ; 5RM0; 5RM1; 5RM2; 5RM3; 5RM4; 5RM5; 5RM6; 5RM7; 5RM8; 5RM9; 5RMA; 5RMB; 5RMC; 5RMD; 5RME; 5RMF; 5RMG; 5RMH; 5RMI; 5RMJ; 5RMK; 5RML; 5RMM; 5RS7; 5RS8; 5RS9; 5RSB; 5RSC; 5RSD; 5RSE; 5RSF; 5RSG; 5RSH; 5RSI; 5RSJ; 5RSK; 5RSL; 5RSM; 5RSN; 5RSO; 5RSP; 5RSQ; 5RSR; 5RSS; 5RST; 5RSU; 5RSV; 5RSW; 5RSX; 5RSY; 5RSZ; 5RT0; 5RT1; 5RT2; 5RT3; 5RT4; 5RT5; 5RT6; 5RT7; 5RT8; 5RT9; 5RTA; 5RTB; 5RTC; 5RTD; 5RTE; 5RTF; 5RTG; 5RTH; 5RTI; 5RTJ; 5RTK; 5RTL; 5RTM; 5RTN; 5RTO; 5RTP; 5RTQ; 5RTR; 5RTS; 5RTT; 5RTU; 5RTV; 5RTW; 5RTX; 5RTY; 5RTZ; 5RU0; 5RU1; 5RU2; 5RU3; 5RU4; 5RU5; 5RU6; 5RU7; 5RU8; 5RU9; 5RUA; 5RUC; 5RUD; 5RUE; 5RUF; 5RUG; 5RUH; 5RUI; 5RUJ; 5RUK; 5RUL; 5RUM; 5RUN; 5RUO; 5RUP; 5RUQ; 5RUR; 5RUS; 5RUT; 5RUU; 5RUV; 5RUW; 5RUX; 5RUY; 5RUZ; 5RV0; 5RV1; 5RV2; 5RV3; 5RV4; 5RV5; 5RV6; 5RV7; 5RV8; 5RV9; 5RVA; 5RVB; 5RVC; 5RVD; 5RVE; 5RVF; 5RVG; 5RVH; 5RVI; 5RVJ; 5RVK; 5RVL; 5RVM; 5RVN; 5RVO; 5RVP; 5RVQ; 5RVR; 5RVS; 5RVT; 5RVU; 5RVV; 5S18; 5S1A; 5S1C; 5S1E; 5S1G; 5S1I; 5S1K; 5S1M; 5S1O; 5S1Q; 5S1S; 5S1U; 5S1W; 5S1Y; 5S20; 5S22; 5S24; 5S26; 5S27; 5S28; 5S29; 5S2A; 5S2B; 5S2C; 5S2D; 5S2E; 5S2F; 5S2G; 5S2H; 5S2I; 5S2J; 5S2K; 5S2L; 5S2M; 5S2N; 5S2O; 5S2P; 5S2Q; 5S2R; 5S2S; 5S2T; 5S2U; 5S2V; 5S2W; 5S2X; 5S2Y; 5S2Z; 5S30; 5S31; 5S32; 5S33; 5S34; 5S35; 5S36; 5S37; 5S38; 5S39; 5S3A; 5S3B; 5S3C; 5S3D; 5S3E; 5S3F; 5S3G; 5S3H; 5S3I; 5S3J; 5S3K; 5S3L; 5S3M; 5S3N; 5S3O; 5S3P; 5S3Q; 5S3R; 5S3S; 5S3T; 5S3U; 5S3V; 5S3W; 5S3X; 5S3Y; 5S3Z; 5S40; 5S41; 5S42; 5S43; 5S44; 5S45; 5S46; 5S47; 5S48; 5S49; 5S4A; 5S4B; 5S4C; 5S4D; 5S4E; 5S4F; 5S4G; 5S4H; 5S4I; 5S4J; 5S4K; 5S6X; 5S6Y; 5S6Z; 5S70; 5S71; 5S72; 5S73; 5S74; 6LU7; 6LZE; 6M03; 6M0K; 6M2N; 6M2Q; 6M71; 6VWW; 6VXS; 6W01; 6W02; 6W4B; 6W4H; 6W61; 6W63; 6W6Y; 6W75; 6W9C; 6W9Q; 6WC1; 6WCF; 6WEN; 6WEY; 6WIQ; 6WJT; 6WKQ; 6WKS; 6WLC; 6WNP; 6WOJ; 6WQ3; 6WQD; 6WQF; 6WRH; 6WRZ; 6WTC; 6WTJ; 6WTK; 6WTM; 6WTT; 6WUU; 6WVN; 6WX4; 6WXC; 6WXD; 6WZU; 6X1B; 6X4I; 6XA4; 6XA9; 6XAA; 6XB0; 6XB1; 6XB2; 6XBG; 6XBH; 6XBI; 6XCH; 6XDH; 6XFN; 6XG3; 6XHM; 6XHU; 6XIP; 6XKF; 6XKH; 6XKM; 6XMK; 6XOA; 6XQS; 6XQT; 6XQU; 6XR3; 6Y2E; 6Y2F; 6Y2G; 6Y84; 6YB7; 6YNQ; 6YVA; 6YVF; 6YWK; 6YWL; 6YWM; 6YYT; 6YZ1; 6Z2E; 6Z5T; 6Z6I; 6Z72; 6ZCT; 6ZLW; 6ZM7; 6ZME; 6ZMI; 6ZMO; 6ZMT; 6ZN5; 6ZOJ; 6ZOK; 6ZON; 6ZP4; 6ZPE; 6ZRT; 6ZRU; 6ZSL; 7A1U; 7ABU; 7ADW; 7AF0; 7AGA; 7AHA; 7AK4; 7AKU; 7ALH; 7ALI; 7AMJ; 7ANS; 7AP6; 7APH; 7AQE; 7AQI; 7AQJ; 7AR5; 7AR6; 7ARF; 7AVD; 7AWR; 7AWS; 7AWU; 7AWW; 7AX6; 7AXM; 7AXO; 7AY7; 7B3E; 7B83; 7BB2; 7BE7; 7BF3; 7BF4; 7BF5; 7BF6; 7BFB; 7BGP; 7BQ7; 7BQY; 7BRO; 7BRP; 7BTF; 7BUY; 7BV1; 7BV2; 7BZF; 7C2I; 7C2J; 7C2K; 7C2Q; 7C2Y; 7C6S; 7C6U; 7C7P; 7C8B; 7C8R; 7C8T; 7C8U; 7CBT; 7CJD; 7CJM; 7CMD; 7COM; 7CWB; 7CWC; 7CX9; 7D1M; 7D1O; 7JFQ; 7JHE; 7JIB; 7JKV; 7JME; 7JOY; 7JP1; 7JPE; 7JPY; 7JPZ; 7JQ0; 7JQ1; 7JQ2; 7JQ3; 7JQ4; 7JQ5; 7JQB; 7JQC; 7JR3; 7JR4; 7JST; 7JU7; 7JUN; 7JVZ; 7JYC; 7JYY; 7JZ0; 7K0F; 7K1L; 7K1O; 7K3N; 7K3T; 7K40; 7K5I; 7K6D; 7K6E; 7K7P; 7K9P; 7KAG; 7KEG; 7KEH; 7KF4; 7KFI; 7KG3; 7KHP; 7KOA; 7KPH; 7KQO; 7KQP; 7KQW; 7KR0; 7KR1; 7KVL; 7KVR; 7KX5; 7KXB; 7KYU; 7L0D; 7L10; 7L11; 7L12; 7L13; 7L14; 7L1F; 7L5D; 7L6R; 7L6T; 7LB7; 7LBN; 7LBR; 7LBS; 7LDX; 7LFE; 7LFP; 7LFZ; 7LG2; 7LG3; 7LG7; 7LGO; 7LKR; 7LKS; 7LKT; 7LKU; 7LKV; 7LKW; 7LKX; 7LLF; 7LLZ; 7LOS; 7LTJ; 7NBR; 7NBS; 7NBY; 7NEV; 7NFV

NS6_SARS2 ORF6 protein (ORF6) (Accessory protein 6) (Non-structural protein 6) (ns6) (Protein X3)
R1A_SARS2 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Host translation inhibitor nsp1 ...
NS8_SARS2 ORF8 protein (ORF8) (Non-structural protein 8) (ns8)
ORF3B_SARS2 ORF3b protein (ORF3b)
VME1_SARS2 Membrane protein (M) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
ORF9C_SARS2 ORF9c protein (ORF9c) (Uncharacterized protein 14) (ORF14)
AP3A_SARS2 ORF3a protein (ORF3a) (Accessory protein 3a) (Protein 3a) (Protein U274) (Protein X1)
ORF3D_SARS2 ORF3d protein
ORF3C_SARS2 ORF3c protein (ORF3c) (ORF3h protein) (ORF3h)
NS7A_SARS2 ORF7a protein (ORF7a) (Accessory protein 7a) (Protein U122) (Protein X4)
ORF9B_SARS2 ORF9b protein (ORF9b) (Accessory protein 9b) (ORF-9b) (Protein 9b)
NCAP_SARS2 Nucleoprotein (N) (Nucleocapsid protein) (NC) (Protein N)
VEMP_SARS2 Envelope small membrane protein (E) (sM protein)

15 entries

Severe acute respiratory syndrome coronavirus (SARS-CoV) reference strain

Select_allDeselect_all
ORF9B_SARS ORF9b protein (Accessory protein 9b) (ORF-9b) (Protein 9b)
SPIKE_SARS Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NCAP_SARS Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS6_SARS ORF6 protein (Accessory protein 6) (Non-structural protein 6) (ns6) (Protein X3)
R1A_SARS Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
NS8B_SARS ORF8b protein (Accessory protein 8b) (Non-structural protein 8b) (ns8b)
R1AB_SARS Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
VME1_SARS Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
Y14_SARS Uncharacterized protein 14
VEMP_SARS Envelope small membrane protein (E protein) (sM protein)
NS7B_SARS Protein non-structural 7b (ns7b) (Accessory protein 7b)
NS8A_SARS ORF8a protein (Accessory protein 8a) (Protein non-structural 8a) (ns8a)
AP3A_SARS ORF3a protein (Accessory protein 3a) (Protein 3a) (Protein U274) (Protein X1)
NS3B_SARS ORF3b protein (Accessory protein 3b) (Non-structural protein 3b) (ns3b) (Protein X2)
NS7A_SARS ORF7a protein (Accessory protein 7a) (Protein U122) (Protein X4)

12 entries

Bat coronavirus 279/2005 (BtCoV) (BtCoV/279/2005) reference strain

Select_allDeselect_all
R1A_BC279 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
NS7B_BC279 Non-structural protein 7b (ns7b) (Accessory protein 7b)
NS7A_BC279 Protein 7a (Accessory protein 7a)
SPIKE_BC279 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
ORF9B_BC279 Protein 9b (Accessory protein 9b) (ORF-9b)
NCAP_BC279 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS6_BC279 Non-structural protein 6 (ns6) (Accessory protein 6)
VME1_BC279 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
AP3A_BC279 Protein 3 (Accessory protein 3)
NS8_BC279 Non-structural protein 8 (ns8) (Accessory protein 8)
VEMP_BC279 Envelope small membrane protein (E protein) (sM protein)
R1AB_BC279 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...

11 entries

Murine coronavirus (strain A59) (MHV-A59) (Murine hepatitis virus) reference strain

Select_allDeselect_all
R1A_CVMA5 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
VEMP_CVMA5 Envelope small membrane protein (E protein) (sM protein)
R1AB_CVMA5 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
NS4_CVMA5 Non-structural protein 4 (ns4) (Accessory protein 4)
SPIKE_CVMA5 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
HEMA_CVMA5 Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NCAP_CVMA5 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS12_CVMA5 Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
IORF_CVMA5 Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
NS2A_CVMA5 Non-structural protein 2a (ns2a) (30 kDa accessory protein) (30 kDa non-structural protein) (ns2) ...
VME1_CVMA5 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)

10 entries

Bat coronavirus 133/2005 (BtCoV) (BtCoV/133/2005) reference strain

Select_allDeselect_all
SPIKE_BC133 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NS3A_BC133 Non-structural protein 3a (ns3a) (Accessory protein 3a)
R1A_BC133 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_BC133 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
NS3C_BC133 Non-structural protein 3c (ns3c) (Accessory protein 3c)
NS3D_BC133 Non-structural protein 3d (ns3d) (Accessory protein 3d)
NCAP_BC133 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
VME1_BC133 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
VEMP_BC133 Envelope small membrane protein (E protein) (sM protein)
NS3B_BC133 Non-structural protein 3b (ns3b) (Accessory protein 3b)

10 entries

Bat coronavirus HKU4 (BtCoV) (BtCoV/HKU4/2004) reference strain

Select_allDeselect_all
R1A_BCHK4 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_BCHK4 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
NCAP_BCHK4 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS3D_BCHK4 Non-structural protein 3d (ns3d) (Accessory protein 3d)
ORF4B_BCHK4 Non-structural protein ORF4b (ORF4b)
VME1_BCHK4 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
NS3A_BCHK4 Non-structural protein 3a (ns3a) (Accessory protein 3a)
VEMP_BCHK4 Envelope small membrane protein (E protein) (sM protein)
SPIKE_BCHK4 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NS3B_BCHK4 Non-structural protein 3b (ns3b) (Accessory protein 3b)

10 entries

Bat coronavirus HKU5 (BtCoV) (BtCoV/HKU5/2004) reference strain

Select_allDeselect_all
SPIKE_BCHK5 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NS3B_BCHK5 Non-structural protein 3b (ns3b) (Accessory protein 3b)
ORF4B_BCHK5 Non-structural protein ORF4b (ORF4b)
R1AB_BCHK5 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
VME1_BCHK5 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
R1A_BCHK5 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
NS3A_BCHK5 Non-structural protein 3a (ns3a) (Accessory protein 3a)
VEMP_BCHK5 Envelope small membrane protein (E protein) (sM protein)
NCAP_BCHK5 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS3D_BCHK5 Non-structural protein 3d (ns3d) (Accessory protein 3d)

9 entries

Bat coronavirus HKU9 (BtCoV) (BtCoV/HKU9) reference strain

Select_allDeselect_all
R1A_BCHK9 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
NS7A_BCHK9 Non-structural protein 7a (ns7a) (Accessory protein 7a)
R1AB_BCHK9 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
VME1_BCHK9 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
SPIKE_BCHK9 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NCAP_BCHK9 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS3_BCHK9 Non-structural protein 3 (ns3) (Accessory protein 3)
NS7B_BCHK9 Non-structural protein 7b (ns7b) (Accessory protein 7b)
VEMP_BCHK9 Envelope small membrane protein (E protein) (sM protein)

8 entries

Porcine hemagglutinating encephalomyelitis virus (strain 67N) (HEV-67N) reference strain

Select_allDeselect_all
SPIKE_CVP67 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NS12_CVP67 Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
NS49_CVP67 Truncated non-structural protein of 4.9 kDa (Truncated ns4.9) (Truncated 4.9 kDa accessory protein)
IORF_CVP67 Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
NCAP_CVP67 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
HEMA_CVP67 Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
VEMP_CVP67 Envelope small membrane protein (E protein) (sM protein)
VME1_CVP67 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)

4 entries

Murine coronavirus (strain 2) (MHV-2) (Murine hepatitis virus) reference strain

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VME1_CVM2 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
R1AB_CVM2 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_CVM2 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
NCAP_CVM2 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)

13 entries

Bat coronavirus Rp3/2004 (BtCoV/Rp3/2004) (SARS-like coronavirus Rp3)

Select_allDeselect_all
R1A_BCRP3 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
NS7B_BCRP3 Non-structural protein 7b (ns7b) (Accessory protein 7b)
SPIKE_BCRP3 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
R1AB_BCRP3 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
ORF9B_BCRP3 Protein 9b (Accessory protein 9b) (ORF-9b)
NCAP_BCRP3 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS6_BCRP3 Non-structural protein 6 (ns6) (Accessory protein 6)
NS8_BCRP3 Non-structural protein 8 (ns8) (Accessory protein 8)
AP3A_BCRP3 Protein 3 (Accessory protein 3)
VEMP_BCRP3 Envelope small membrane protein (E protein) (sM protein)
Y14_BCRP3 Uncharacterized protein 14
VME1_BCRP3 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
NS7A_BCRP3 Protein 7a (Accessory protein 7a)

12 entries

Bat coronavirus HKU3 (BtCoV) (SARS-like coronavirus HKU3)

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SPIKE_BCHK3 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NS6_BCHK3 Non-structural protein 6 (ns6) (Accessory protein 6)
R1A_BCHK3 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
NCAP_BCHK3 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
ORF9B_BCHK3 Protein 9b (Accessory protein 9b) (ORF-9b)
VME1_BCHK3 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
R1AB_BCHK3 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
AP3A_BCHK3 Protein 3 (Accessory protein 3)
NS7A_BCHK3 Protein 7a (Accessory protein 7a)
NS7B_BCHK3 Non-structural protein 7b (ns7b) (Accessory protein 7b)
VEMP_BCHK3 Envelope small membrane protein (E protein) (sM protein)
NS8_BCHK3 Non-structural protein 8 (ns8) (Accessory protein 8)

12 entries

Bovine coronavirus (strain 98TXSF-110-ENT) (BCoV-ENT) (BCV)

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SPIKE_CVBEN Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
R1A_CVBEN Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
NCAP_CVBEN Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
IORF_CVBEN Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
R1AB_CVBEN Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
NS2A_CVBEN Non-structural protein 2a (ns2a) (32 kDa accessory protein) (32 kDa non-structural protein) (ns2)
NS49_CVBEN Truncated non-structural protein of 4.9 kDa (Truncated ns4.9) (Truncated 4.9 kDa accessory protein)
HEMA_CVBEN Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NS12_CVBEN Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
NS48_CVBEN Non-structural protein of 4.8 kDa (ns4.8) (4.8 kDa accessory protein)
VME1_CVBEN Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
VEMP_CVBEN Envelope small membrane protein (E protein) (sM protein)

12 entries

Bovine coronavirus (strain 98TXSF-110-LUN) (BCoV-LUN) (BCV)

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NCAP_CVBLU Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
SPIKE_CVBLU Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
IORF_CVBLU Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
NS49_CVBLU Truncated non-structural protein of 4.9 kDa (Truncated ns4.9) (Truncated 4.9 kDa accessory protein)
R1AB_CVBLU Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
NS12_CVBLU Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
VME1_CVBLU Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
HEMA_CVBLU Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NS48_CVBLU Non-structural protein of 4.8 kDa (ns4.8) (4.8 kDa accessory protein)
NS2A_CVBLU Non-structural protein 2a (ns2a) (32 kDa accessory protein) (32 kDa non-structural protein) (ns2)
R1A_CVBLU Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
VEMP_CVBLU Envelope small membrane protein (E protein) (sM protein)

12 entries

Bovine coronavirus (strain Mebus) (BCoV) (BCV)

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R1A_CVBM Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
SPIKE_CVBM Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
VME1_CVBM Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
NS2A_CVBM Non-structural protein 2a (ns2a) (32 kDa accessory protein) (32 kDa non-structural protein) (ns2)
R1AB_CVBM Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
NS12_CVBM Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
IORF_CVBM Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
NS49_CVBM Non-structural protein of 4.9 kDa (ns4.9) (4.9 kDa accessory protein)
HEMA_CVBM Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NS48_CVBM Non-structural protein of 4.8 kDa (ns4.8) (4.8 kDa accessory protein)
VEMP_CVBM Envelope small membrane protein (E protein) (sM protein)
NCAP_CVBM Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)

12 entries

Bovine coronavirus (strain Quebec) (BCoV) (BCV)

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VME1_CVBQ Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
SPIKE_CVBQ Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NS48_CVBQ Non-structural protein of 4.8 kDa (ns4.8) (4.8 kDa accessory protein)
NS2A_CVBQ Non-structural protein 2a (ns2a) (32 kDa accessory protein) (32 kDa non-structural protein) (ns2)
NS12_CVBQ Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
R1AB_CVBQ Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
R1A_CVBQ Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
IORF_CVBQ Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
HEMA_CVBQ Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NS49_CVBQ Non-structural protein of 4.9 kDa (ns4.9) (4.9 kDa accessory protein)
VEMP_CVBQ Envelope small membrane protein (E protein) (sM protein)
NCAP_CVBQ Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)

11 entries

Murine coronavirus (strain JHM) (MHV-JHM) (Murine hepatitis virus)

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R1A_CVMJH Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
SPIKE_CVMJH Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NS2A_CVMJH Non-structural protein 2a (ns2a) (30 kDa accessory protein) (30 kDa non-structural protein) (ns2) ...
NS4_CVMJH Non-structural protein 4 (ns4) (Accessory protein 4)
VEMP_CVMJH Envelope small membrane protein (E protein) (sM protein)
VME1_CVMJH Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
R1AB_CVMJH Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
IORF_CVMJH Protein I (N internal ORF protein) (IORF) (N2 protein) (Protein in nucleocapsid ORF)
NCAP_CVMJH Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
HEMA_CVMJH Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NS12_CVMJH Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)

10 entries

Bovine coronavirus (strain LSU-94LSS-051) (BCoV-LSU) (BCV)

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IORF_CVBLS Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
SPIKE_CVBLS Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
VEMP_CVBLS Envelope small membrane protein (E protein) (sM protein)
NS2A_CVBLS Non-structural protein 2a (ns2a) (32 kDa accessory protein) (32 kDa non-structural protein) (ns2)
VME1_CVBLS Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
HEMA_CVBLS Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NCAP_CVBLS Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS12_CVBLS Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
NS48_CVBLS Non-structural protein of 4.8 kDa (ns4.8) (4.8 kDa accessory protein)
NS49_CVBLS Truncated non-structural protein of 4.9 kDa (Truncated ns4.9) (Truncated 4.9 kDa accessory protein)

10 entries

Bovine coronavirus (strain LY-138) (BCoV) (BCV)

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VME1_CVBLY Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
NCAP_CVBLY Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
SPIKE_CVBLY Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NS48_CVBLY Non-structural protein of 4.8 kDa (ns4.8) (4.8 kDa accessory protein)
NS12_CVBLY Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
NS49_CVBLY Non-structural protein of 4.9 kDa (ns4.9) (4.9 kDa accessory protein)
VEMP_CVBLY Envelope small membrane protein (E protein) (sM protein)
NS2A_CVBLY Non-structural protein 2a (ns2a) (32 kDa accessory protein) (32 kDa non-structural protein) (ns2)
HEMA_CVBLY Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
IORF_CVBLY Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)

10 entries

Bovine coronavirus (strain OK-0514) (BCoV) (BCV)

Select_allDeselect_all
SPIKE_CVBOK Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NS12_CVBOK Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
NS49_CVBOK Non-structural protein of 4.9 kDa (ns4.9) (4.9 kDa accessory protein)
VME1_CVBOK Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
HEMA_CVBOK Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
IORF_CVBOK Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
NS48_CVBOK Non-structural protein of 4.8 kDa (ns4.8) (4.8 kDa accessory protein)
NCAP_CVBOK Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS2A_CVBOK Non-structural protein 2a (ns2a) (32 kDa accessory protein) (32 kDa non-structural protein) (ns2)
VEMP_CVBOK Envelope small membrane protein (E protein) (sM protein)

10 entries

Human coronavirus OC43 (HCoV-OC43)

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R1A_CVHOC Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
SPIKE_CVHOC Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
R1AB_CVHOC Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
VEMP_CVHOC Envelope small membrane protein (E protein) (sM protein)
VME1_CVHOC Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
IORF_CVHOC Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
HEMA_CVHOC Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NCAP_CVHOC Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS2A_CVHOC Non-structural protein 2a (ns2a) (32 kDa accessory protein) (32 kDa non-structural protein) (ns2)
NS12_CVHOC Non-structural protein of 12.9 kDa (ns12.9) (12.9 kDa accessory protein) (NS2)

10 entries

Middle East respiratory syndrome-related coronavirus (isolate United Kingdom/H123990006/2012) (MERS-CoV) (Betacoronavirus England 1)

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SPIKE_MERS1 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
R1A_MERS1 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Host translation inhibitor nsp1 ...
ORF4A_MERS1 Non-structural protein ORF4a (ORF4a)
NCAP_MERS1 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
R1AB_MERS1 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
ORF3_MERS1 Non-structural protein ORF3 (ORF3)
VEMP_MERS1 Envelope small membrane protein (E protein) (sM protein)
ORF5_MERS1 Non-structural protein ORF5 (ORF5)
ORF4B_MERS1 Non-structural protein ORF4b (ORF4b)
VME1_MERS1 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)

9 entries

Human coronavirus HKU1 (isolate N1) (HCoV-HKU1)

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R1AB_CVHN1 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
NS12_CVHN1 Non-structural protein 4 (ns4) (Accessory protein 4) (Non-structural protein of 12.5 kDa) (ns12.5) ...
SPIKE_CVHN1 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NCAP_CVHN1 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
VME1_CVHN1 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
R1A_CVHN1 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
HEMA_CVHN1 Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
IORF_CVHN1 Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Orf8 protein) (Protein in ...
VEMP_CVHN1 Envelope small membrane protein (E protein) (sM protein)

9 entries

Human coronavirus HKU1 (isolate N2) (HCoV-HKU1)

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NCAP_CVHN2 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
R1A_CVHN2 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
NS12_CVHN2 Non-structural protein 4 (ns4) (Accessory protein 4) (Non-structural protein of 12.5 kDa) (ns12.5) ...
VME1_CVHN2 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
HEMA_CVHN2 Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
R1AB_CVHN2 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
VEMP_CVHN2 Envelope small membrane protein (E protein) (sM protein)
SPIKE_CVHN2 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
IORF_CVHN2 Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Orf8 protein) (Protein in ...

9 entries

Human coronavirus HKU1 (isolate N5) (HCoV-HKU1)

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NCAP_CVHN5 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
SPIKE_CVHN5 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
R1A_CVHN5 Replicase polyprotein 1a (pp1a) (ORF1a polyprotein) [Cleaved into: Non-structural protein 1 (nsp1) ...
R1AB_CVHN5 Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein) [Cleaved into: Host translation inhibitor ...
VEMP_CVHN5 Envelope small membrane protein (E protein) (sM protein)
NS12_CVHN5 Non-structural protein 4 (ns4) (Accessory protein 4) (Non-structural protein of 12.5 kDa) (ns12.5) ...
VME1_CVHN5 Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
IORF_CVHN5 Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Orf8 protein) (Protein in ...
HEMA_CVHN5 Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)

9 entries

Rat coronavirus (strain 681) (RCV-SDAV) (Sialodacryoadenitis virus SDAV-681)

Select_allDeselect_all
SPIKE_CVRSD Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
NS12_CVRSD Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
IORF_CVRSD Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
VME1_CVRSD Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
VEMP_CVRSD Envelope small membrane protein (E protein) (sM protein)
HEMA_CVRSD Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NS4_CVRSD Non-structural protein 4 (15 kDa non-structural protein) (Accessory protein 4) (ns4)
NCAP_CVRSD Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS2A_CVRSD Non-structural protein 2a (ns2a) (32 kDa accessory protein) (32 kDa non-structural protein) (ns2)

8 entries

Porcine hemagglutinating encephalomyelitis virus (strain IAF-404) (HEV)

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SPIKE_CVPIA Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
VME1_CVPIA Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
NCAP_CVPIA Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
IORF_CVPIA Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
HEMA_CVPIA Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
VEMP_CVPIA Envelope small membrane protein (E protein) (sM protein)
NS49_CVPIA Truncated non-structural protein of 4.9 kDa (Truncated ns4.9) (Truncated 4.9 kDa accessory protein)
NS12_CVPIA Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)

7 entries

Bovine coronavirus (strain F15) (BCoV) (BCV)

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SPIKE_CVBF Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
VME1_CVBF Membrane protein (M protein) (E1 glycoprotein) (Matrix glycoprotein) (Membrane glycoprotein)
HEMA_CVBF Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NCAP_CVBF Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
NS12_CVBF Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
IORF_CVBF Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
VEMP_CVBF Envelope small membrane protein (E protein) (sM protein)

5 entries

Bovine coronavirus (strain Ontario) (BCoV) (BCV)

Select_allDeselect_all
NS49_CVBON Truncated non-structural protein of 4.9 kDa (Truncated ns4.9) (Truncated 4.9 kDa accessory protein)
NS12_CVBON Non-structural protein of 12.7 kDa (ns12.7) (12.7 kDa accessory protein)
NS48_CVBON Non-structural protein of 4.8 kDa (ns4.8) (4.8 kDa accessory protein)
HEMA_CVBON Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
VEMP_CVBON Envelope small membrane protein (E protein) (sM protein)

5 entries

Murine coronavirus (strain S) (MHV-S) (Murine hepatitis virus)

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IORF_CVMS Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
VEMP_CVMS Envelope small membrane protein (E protein) (sM protein)
HEMA_CVMS Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NS4_CVMS Non-structural protein 4 (ns4) (Accessory protein 4)
NCAP_CVMS Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)

2 entries

Bovine coronavirus (strain L9) (BCoV) (BCV)

Select_allDeselect_all
SPIKE_CVBL9 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...
HEMA_CVBL9 Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)

2 entries

Murine coronavirus (strain 1) (MHV-1) (Murine hepatitis virus)

Select_allDeselect_all
IORF_CVM1 Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)
NCAP_CVM1 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)

2 entries

Murine coronavirus (strain 3) (MHV-3) (Murine hepatitis virus)

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NCAP_CVM3 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)
IORF_CVM3 Protein I (Accessory protein N2) (N internal ORF protein) (IORF) (Protein in nucleocapsid ORF)

2 entries

Murine coronavirus (strain DVIM) (MHV-DVIM) (Murine hepatitis virus)

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HEMA_CVMDV Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NCAP_CVMDV Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)

2 entries

Puffinosis coronavirus (PV) (Puffinosis virus)

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HEMA_CVPV Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)
NCAP_CVPV Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)

1 entry

Bovine coronavirus (strain G95) (BCoV) (BCV)

HEMA_CVBG9 Hemagglutinin-esterase (HE protein) (EC 3.1.1.53) (E3 glycoprotein)

1 entry

Bovine coronavirus (strain vaccine) (BCoV) (BCV)

SPIKE_CVBV Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...

1 entry

Equine coronavirus (isolate NC99) (ECoV)

NCAP_CVEN9 Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)

1 entry

Murine coronavirus (strain 4) (MHV-4) (Murine hepatitis virus)

SPIKE_CVM4 Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...

1 entry

Murine coronavirus (strain JHMV / variant CL-2) (MHV) (Murine hepatitis virus)

SPIKE_CVMJC Spike glycoprotein (S glycoprotein) (E2) (Peplomer protein) [Cleaved into: Spike protein S1; Spike ...

1 entry

Rat coronavirus (strain NJ) (RCV-NJ)

NCAP_CVRNJ Nucleoprotein (Nucleocapsid protein) (NC) (Protein N)